Basic Information

Insect: Tachina fera
Gene Symbol: -
Assembly: GCA_905220375.1
Location: LR999967.1:32966130-32968858[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.3 2.7e+02 3.7 0.3 1 13 104 116 104 120 0.84

2 12 0.24 28 6.8 0.4 1 19 208 226 208 226 0.89

3 12 0.00043 0.049 15.4 5.7 1 23 248 270 248 270 0.99

4 12 1.2e-05 0.0014 20.3 0.5 2 23 280 301 279 301 0.97

5 12 0.00064 0.074 14.9 1.1 1 23 327 348 327 348 0.96

6 12 6.5e-05 0.0074 18.0 0.8 1 23 354 376 354 376 0.99

7 12 0.00047 0.054 15.3 1.3 1 23 415 437 415 437 0.96

8 12 1e-07 1.2e-05 26.8 0.7 1 23 443 465 443 465 0.99

9 12 0.00013 0.015 17.1 3.5 1 23 471 493 471 493 0.99

10 12 2e-05 0.0023 19.6 0.4 1 23 499 521 499 521 0.98

11 12 1.9e-05 0.0022 19.7 0.3 1 23 525 547 525 547 0.98

12 12 0.0022 0.25 13.2 0.2 2 23 560 581 560 582 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.3	2.7e+02	3.7	0.3	1	13	104	116	104	120	0.84
2	12	0.24	28	6.8	0.4	1	19	208	226	208	226	0.89
3	12	0.00043	0.049	15.4	5.7	1	23	248	270	248	270	0.99
4	12	1.2e-05	0.0014	20.3	0.5	2	23	280	301	279	301	0.97
5	12	0.00064	0.074	14.9	1.1	1	23	327	348	327	348	0.96
6	12	6.5e-05	0.0074	18.0	0.8	1	23	354	376	354	376	0.99
7	12	0.00047	0.054	15.3	1.3	1	23	415	437	415	437	0.96
8	12	1e-07	1.2e-05	26.8	0.7	1	23	443	465	443	465	0.99
9	12	0.00013	0.015	17.1	3.5	1	23	471	493	471	493	0.99
10	12	2e-05	0.0023	19.6	0.4	1	23	499	521	499	521	0.98
11	12	1.9e-05	0.0022	19.7	0.3	1	23	525	547	525	547	0.98
12	12	0.0022	0.25	13.2	0.2	2	23	560	581	560	582	0.95

Sequence Information

Coding Sequence: ATGGCAGAAGAAATCGTCGACCTAATAGAAGAATCTAACGACGAAATAGAAAACTGGATATATTATAGTAATGAAGTTAAAAGCCAAGAAAATCCAGAAGCGAATTCCTTTACTGATGTAGATGGAAGCCAATTACTTTATATAGATCCAACAAATCTAGTGTCAACTGACAATGAACAGAGATTTCATTATGATTTCAACGATGAAGGAAATGATCCAACGGAAGAAGCGCAAGATAATATCGATGTATCTGAACATAacataatattaaaagaaactATTGATGAAAATGGCCAGCTGGTTGAAGAGTATTTTTGTGGACAGTGCAATTTATCATTCAATAGCATAGAAGATTTTCTCGGCTATCATCCTTCTTTGGAGCTGTTGAATGAAAATCCCGAAGAGCAAGATCAAGAACAATTAAAGCCTGACGTAGATGACGTAGTGCCAATAGCAGCAGAAGACAGATTATGGGACTTAGTAGAGAATTTGGATGAAGAAAAAAATGATATTGATAAAGACGAAAATGTAGAAATAAAACCAATTATTGCAAATCAACAAGATGAATCTTCACAGGAAAATGAGATTTGTAATAAAGAAATCGAAATGGATAAAGAACGCTATTTCTGTTACGATTGTCAGCAGGTATTTACGGATTTGACAACAGCAGAAAATCATGATTGTAACAATCAGTTGCAAAATTCAAACGACATCTCAGAGCAAGTTGGTGATAGTAGTGTCTACAAGTGTCATTTATGCAATAAAGAATATACATCGTTTCGGTCGTTTAACAATCACCAAAggtggcatacaaataatttgcATGCTGAGCCTTCTGTTTGTACAATTTGTAATACAATATTTGCATCGGAGAAGAATTTAAAgttACACATGAAGATGCATAAGAAGCATTCAATTAAAACCATACAAGAGGCATTACCAGTTGGAGCACAAAGTGAATATaacgaattaaataaattcttttgtgaaatttgcaataaaagTTTCGATCAAAAACTCTTGGTGATACACAAAAATATGCATCAAAATCTAGAGGAATATACTTGtgttaaatgtaataaaaaatttgaaaatttgccCAGCTACGAAATACACATGCAAATGCACGTAGACACTGTTAAGAATGGAAATACATCAAAAATGTCCAATAAAACAAATGTGCTTGCTGATGAAGCCCCCTCAACATCAACTCGTGAATTTATTGATGCAGGTAAACGTAAGCATGCTTGTCAATATTGTGGCAAGGAGTTTCAACGTCCCTATGAAAAAGTGAAGCATGAACGTATACACACTGGAGAAAAACCTTACGAATGTGAAGTGTGCGGCAAGACATTTAGGGTTTCCTATTCGTTAACATTGCACTTGAGAACACATACCGATATACGTCCGTATGTCTGTGCCACCTGTAATAAACGCTTCAAACAGCAATCTGTTTATGTACATCATTTAAAAACCCATGACGCGGAGTGTGCTTATAAATGTGATATATGTAGCAAAAGTTTTCGCACTTTAGTACAATTGGCTGGCCATAAAAATATCCATAGTAAACCTTATAATTGTACTGAATGTAATCGACCATTTGCGTCTTTGTATGCTGTCAAAATTCATATGAAAACGCACAACAAGTGTCATAAATCtaataagaatttgaaaaatcggTGCAGCATTTGCGGAGCTTCTTACgctcgtgtatttgctttaagtATACACATTAAGGAACATCATGGCATCAGTGTAGATCCTGTAAATTTGTATGCAGTCGTCGGCGGAAATGAAAATACACAAATGCGCATAGAGGATGAAACtgctttattaattaatgcagCCAATGGGGCAATTAATCAAGAAATGCATTATATAAATGCCGGTGATGAAGAAGCCCCTAATGCTGATGATTACGGGGAGGCATATAGTATTCAAGTGGACCATGAGGAAAATATACAGAATAGTTTACCAAGTAATATTTATATGGATGAAACTGAAGCTGCtacacaaacaattttaaatacggAGGAAATTTCCATTGATAATTTCCCTACTGAAGAAATTATAACTGACTGGCTTGTGAAGTAA
Protein Sequence: MAEEIVDLIEESNDEIENWIYYSNEVKSQENPEANSFTDVDGSQLLYIDPTNLVSTDNEQRFHYDFNDEGNDPTEEAQDNIDVSEHNIILKETIDENGQLVEEYFCGQCNLSFNSIEDFLGYHPSLELLNENPEEQDQEQLKPDVDDVVPIAAEDRLWDLVENLDEEKNDIDKDENVEIKPIIANQQDESSQENEICNKEIEMDKERYFCYDCQQVFTDLTTAENHDCNNQLQNSNDISEQVGDSSVYKCHLCNKEYTSFRSFNNHQRWHTNNLHAEPSVCTICNTIFASEKNLKLHMKMHKKHSIKTIQEALPVGAQSEYNELNKFFCEICNKSFDQKLLVIHKNMHQNLEEYTCVKCNKKFENLPSYEIHMQMHVDTVKNGNTSKMSNKTNVLADEAPSTSTREFIDAGKRKHACQYCGKEFQRPYEKVKHERIHTGEKPYECEVCGKTFRVSYSLTLHLRTHTDIRPYVCATCNKRFKQQSVYVHHLKTHDAECAYKCDICSKSFRTLVQLAGHKNIHSKPYNCTECNRPFASLYAVKIHMKTHNKCHKSNKNLKNRCSICGASYARVFALSIHIKEHHGISVDPVNLYAVVGGNENTQMRIEDETALLINAANGAINQEMHYINAGDEEAPNADDYGEAYSIQVDHEENIQNSLPSNIYMDETEAATQTILNTEEISIDNFPTEEIITDWLVK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01074699;
90% Identity: iTF_01399693; iTF_01398759; iTF_01074699;
80% Identity: -