Basic Information

Insect: Tachina lurida
Gene Symbol: -
Assembly: GCA_944452685.1
Location: CALYBZ010001807.1:131033-134192[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.6 3.5e+02 2.9 0.1 1 13 126 138 126 142 0.81

2 12 0.22 21 6.7 0.4 1 19 227 245 227 245 0.89

3 12 0.00025 0.025 15.9 3.5 1 23 267 289 267 289 0.98

4 12 1.1e-05 0.001 20.3 0.5 2 23 299 320 298 320 0.97

5 12 0.00057 0.056 14.8 1.1 1 23 346 367 346 367 0.96

6 12 0.00028 0.027 15.8 1.9 1 23 373 395 373 395 0.98

7 12 0.00042 0.041 15.3 1.3 1 23 434 456 434 456 0.96

8 12 9.3e-08 9e-06 26.8 0.7 1 23 462 484 462 484 0.99

9 12 0.00012 0.011 17.0 3.5 1 23 490 512 490 512 0.99

10 12 9e-07 8.8e-05 23.7 0.4 1 23 518 540 518 540 0.99

11 12 1.7e-05 0.0016 19.7 0.3 1 23 544 566 544 566 0.98

12 12 0.0065 0.64 11.5 0.1 2 23 579 601 579 601 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.6	3.5e+02	2.9	0.1	1	13	126	138	126	142	0.81
2	12	0.22	21	6.7	0.4	1	19	227	245	227	245	0.89
3	12	0.00025	0.025	15.9	3.5	1	23	267	289	267	289	0.98
4	12	1.1e-05	0.001	20.3	0.5	2	23	299	320	298	320	0.97
5	12	0.00057	0.056	14.8	1.1	1	23	346	367	346	367	0.96
6	12	0.00028	0.027	15.8	1.9	1	23	373	395	373	395	0.98
7	12	0.00042	0.041	15.3	1.3	1	23	434	456	434	456	0.96
8	12	9.3e-08	9e-06	26.8	0.7	1	23	462	484	462	484	0.99
9	12	0.00012	0.011	17.0	3.5	1	23	490	512	490	512	0.99
10	12	9e-07	8.8e-05	23.7	0.4	1	23	518	540	518	540	0.99
11	12	1.7e-05	0.0016	19.7	0.3	1	23	544	566	544	566	0.98
12	12	0.0065	0.64	11.5	0.1	2	23	579	601	579	601	0.95

Sequence Information

Coding Sequence: ATGGTTAAGCTAACTGATTTAAATACGGACAAATTAACCGAATCAATCAACTACTTTGCAGAAGAAATCGTCGACCTAATAGAAGAATCTAACGACGAATTAGAAAATTGGATATATTATAGTAATGAAATTAAAAGCCAAGAAAATCCAGAAACGAGTTCCTTTACTGATATAGATGCAAGCCAATTACTTTATGTAGATTCAACAAATTTAGTGTCAACTGACAATGAACAGAGATTTCAGTATGATTACAACGATGAAGGAATTGATCCAAGTAAAGAACAAACGGAAGAACCGCAAGATAATATCGATGTATCTGAACATAACATAATACTTAAAGAAACTATTGATGAAAATGGCCAGCTGGTGGAAGAGTATTTATGTGGACAGTGCAATATATCGTTCAATAGCATAGAAGATTTTCTTGACTATCATCCTTCTTTGGAGTTGTTGAATGAAAATCCCGAAGAGCAAGAACAAGAACAATTAAAGCCTGACATAGTGCCAATGGCAGCAGAAGACAGATTATGGGACTTAGTAGAAAATTTGGATGAAGAAAAAAATTATGTTGATAAAGACGAAAATGTAGAAATAAAACCAATTATTGCAAATCAAGAAGATGAATCTTCACAGGAAAAGGAGATTTGTAATAATGCAATTGAAATGGATAAAGAACGTTATTTCTGTTACGATTGTCAGCAGGTATTTACGGATTTGACAACAGCAGAAAATCATGATTGTAACAATCAATTGCAAAATTCAAGCGACATCTCAGAGCAAGTGGGTGATAATAGTGTCTACAAGTGTCAATTATGCAATAAAGAATATACATCGTTTCGGTCATTTAACAATCACCAAAGGTGGCATACAAATAATTTGCATGCTGAGCCTTCTGTTTGCACAATTTGTAATACAATATTTGCATCGGAGAAGAATTTAAAGTTACACATGAAGATGCATAAGAAGCATTCAATTAAAACCATACAAGAGGCATTACCAGTTGGAGCACAAAGTGAATATAACGAATTAAATAAATTCTTCTGTGAAATTTGCAATAAAAGTTTCGATCAAAAACTCTTGGTGATACACAAGAATATGCATCAAAATCTAGAGGAACATACTTGTGTTAAATGCAATAAAAAATTTGAAAATTTGCCCAGTTACGAAATACATATGCAAATGCATATAGACACAGTTAAGAAAGGCAATACATCTAAAATGTCCAATAAAACAAATGATGTTACTGATGAAGTCCCCTCAACATCAACTCGTGGATTTATTGATGCAGGTAAACGTAAGCATGCTTGTCAATATTGTGGCAAGGAGTTTCAACGTCCCTATGAGAAAGTGAAGCATGAACGTATACACACTGGAGAAAAACCATACGAATGTGAAGTGTGCGGCAAGACATTTAGGGTTTCCTATTCGTTAACATTGCACTTGAGAACACATACCGATATACGTCCGTATGTGTGTGCCACCTGTAATAAACGCTTCAAACAACAATCTGTTTATGTACACCATTTAAAAACCCATGAGGCGGAGTGTGCATATAAATGTGATATATGTGGCAAAAGTTTTCGCACTTTAGTACAATTGGCTGGCCATAAAAATACCCACAGTAAACCTTATAATTGTACTGAATGTAATCGACCATTTGCGTCGTTGTATGCTGTCAAAATTCATATGAAAACGCACAACAAGTGTCATAAATCTAATAAGAATTTGAAAAATCGATGCAGCATTTGCGGAGCCTCTTATGCTCGTGTATTTGCTTTAAGTTTACACATTAAGGAACAGCATGGCATCAATGCAGATCCTGTAAAGTTGTTTTCAGTCGTCGGCGGAAATGAAAATACACAAATGCGTATAGAAGATGAAACTGCTTTATTAATTAATGCATCCAATGGGGCAGTTAATCAAGAAATGCATTATATAAATGCCGATGACGAAGAAGTCCCTAATGATGTTGCTTACGATGATGGGGCGGCATATGGTAGTCAAGTGGATCATGAGGAAAATATACAGAATACTTTAGCAAGTAATATTTATATGGATGAAACTGAAGCAGCTACACAAGCAATTTTAAATACCGAAGAAATATCCATTGATAATTTTCCTACCGAAGAAATTATAACTGACTGGCTTGTGAAGTAA
Protein Sequence: MVKLTDLNTDKLTESINYFAEEIVDLIEESNDELENWIYYSNEIKSQENPETSSFTDIDASQLLYVDSTNLVSTDNEQRFQYDYNDEGIDPSKEQTEEPQDNIDVSEHNIILKETIDENGQLVEEYLCGQCNISFNSIEDFLDYHPSLELLNENPEEQEQEQLKPDIVPMAAEDRLWDLVENLDEEKNYVDKDENVEIKPIIANQEDESSQEKEICNNAIEMDKERYFCYDCQQVFTDLTTAENHDCNNQLQNSSDISEQVGDNSVYKCQLCNKEYTSFRSFNNHQRWHTNNLHAEPSVCTICNTIFASEKNLKLHMKMHKKHSIKTIQEALPVGAQSEYNELNKFFCEICNKSFDQKLLVIHKNMHQNLEEHTCVKCNKKFENLPSYEIHMQMHIDTVKKGNTSKMSNKTNDVTDEVPSTSTRGFIDAGKRKHACQYCGKEFQRPYEKVKHERIHTGEKPYECEVCGKTFRVSYSLTLHLRTHTDIRPYVCATCNKRFKQQSVYVHHLKTHEAECAYKCDICGKSFRTLVQLAGHKNTHSKPYNCTECNRPFASLYAVKIHMKTHNKCHKSNKNLKNRCSICGASYARVFALSLHIKEQHGINADPVKLFSVVGGNENTQMRIEDETALLINASNGAVNQEMHYINADDEEVPNDVAYDDGAAYGSQVDHEENIQNTLASNIYMDETEAATQAILNTEEISIDNFPTEEIITDWLVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01074699;
90% Identity: iTF_01397729;
80% Identity: -