Basic Information

Insect: Tachina grossa
Gene Symbol: -
Assembly: GCA_949987645.1
Location: OX465278.1:119190599-119193283[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.7 2.2e+02 4.1 0.3 1 14 108 121 108 124 0.84

2 12 0.25 33 6.7 0.4 1 19 209 227 209 227 0.89

3 12 0.00045 0.058 15.4 5.7 1 23 262 284 262 284 0.99

4 12 1.2e-05 0.0016 20.3 0.5 2 23 294 315 293 315 0.97

5 12 0.00067 0.086 14.8 1.1 1 23 341 362 341 362 0.96

6 12 6.8e-05 0.0087 18.0 0.8 1 23 368 390 368 390 0.99

7 12 0.00049 0.063 15.3 1.3 1 23 429 451 429 451 0.96

8 12 1.1e-07 1.4e-05 26.8 0.7 1 23 457 479 457 479 0.99

9 12 0.00014 0.018 17.0 3.5 1 23 485 507 485 507 0.99

10 12 2.4e-06 0.00031 22.5 0.3 1 23 513 535 513 535 0.98

11 12 2e-05 0.0025 19.7 0.3 1 23 539 561 539 561 0.98

12 12 0.0077 0.99 11.5 0.1 2 23 574 596 574 596 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.7	2.2e+02	4.1	0.3	1	14	108	121	108	124	0.84
2	12	0.25	33	6.7	0.4	1	19	209	227	209	227	0.89
3	12	0.00045	0.058	15.4	5.7	1	23	262	284	262	284	0.99
4	12	1.2e-05	0.0016	20.3	0.5	2	23	294	315	293	315	0.97
5	12	0.00067	0.086	14.8	1.1	1	23	341	362	341	362	0.96
6	12	6.8e-05	0.0087	18.0	0.8	1	23	368	390	368	390	0.99
7	12	0.00049	0.063	15.3	1.3	1	23	429	451	429	451	0.96
8	12	1.1e-07	1.4e-05	26.8	0.7	1	23	457	479	457	479	0.99
9	12	0.00014	0.018	17.0	3.5	1	23	485	507	485	507	0.99
10	12	2.4e-06	0.00031	22.5	0.3	1	23	513	535	513	535	0.98
11	12	2e-05	0.0025	19.7	0.3	1	23	539	561	539	561	0.98
12	12	0.0077	0.99	11.5	0.1	2	23	574	596	574	596	0.95

Sequence Information

Coding Sequence: ATGGCAGAAGAAATCGTCGACCTAATAGAAGAATCTAACGACGAAAGAGAAAATTGGATATATTATAGTAATGAAATTAAGAACCAAGAAAATCCAGAATCGAATTCCTTTACTGATGTAGATGCAAGCcaattactttatatagattCAACAAATCTAGTGTCAACTGACAATGAACAGAGATTTCAGTATGATTACAACGATGACGGAATAGATCCAAGTAAAGAACGAACGGAAGAACCGCAAGATAATATCGATGTATCTGAACATAACATAATATTAAAAGAAACTATTGATGAAAATGGACAGCTGGTGGAAGAGTATTTTTGTGGACAGTGCAACATATCATTCAATACCATAGAAGATTTTCTTGACTATCATCCTTCTTTGGAGCTATTGAATGAAAATCCCGAAGAGCAAGATCAAGAACAAATAAAGCCTGATGTAGTGCCAATGGCAGCAGAAGACAGATTATGGGACTTAGTAGAGAATTTGGATGAAGAAAAAAATGATGTTGATAAAGACgaaaatgtagaaataaaaccAATTATTGCAAATGAACCAGATGAATCTTCACAGGAAAAGGAGatttttaataatgaaattgaaatgGATAAAGAACGCTATTTCTGTTACGATTGTCAGCAGGTATTTACGGATTTGACAACGGCAGAAAATCATGATTGTAACAATCAATTGCAAAACTCAAACGACACCTCAGAGtatgtatgtataaatatttttttgtctaaCTCATATCAGCAAGTGGGTGATCATAGTGTCTACAAGTGTCATTTATGCAATAAAGAATATACATCGTTTCGGTCATTTAACAATCACCAAAGGTGGCATACAAATAACTTGCATGCTGAGCCTTCTGTTTGTACAATTTGTAATACAATATTTGCATCGGAAAAGAATTTAAAGTTACACATGAAGATGCATAAGAAGCATTTAATTAAATCCATACAAGATGCATTGCCAGTTGGAGCACAAAGTGAATACAacgaattaaataaattcttttgtgaaatttgcaataaaagttttgatcaAAAACTCTTGGTGATACACAAGAATATGCATCAAAATCTAGAGGAATATACTTGTgttaaatgcaataaaaaatttgaaaatttgccCAGCTACGAAATACACATGCAAATGCATGTAGACACTGTTAAGAAAGGAAATACATCTAAAATGTCCAATAAAACAAATGTGCTTGCTGATGAAGACCCCTCAACATCAACTCGTGGATTTATTGATGCAGGTAAACGTAAgcatgcttgtcaatattgtgGCAAGGAGTTTCAACGTCCCTATGAAAAAGTGAAGCATGAACGTATACACACTGGAGAAAAACCATACGAATGTGAAGTGTGCGGCAAGACATTTAGGGTTTCCTATTCGTTAACATTGCACTTGAGAACACATACCGATATACGTCCGTATGTCTGTGCCACCTGTAATAAGCGATTCAAACAACAATCTGTTTATGTACATCATTTGAAAACCCATGAAGCGGAGTGTGCATATAAATGTGATATATGTGGCAAAAGTTTTCGTACTTTAGTACAATTGGCTGGTCATAAAAATATCCATATTAAACCTTATAATTGTACTGAGTGTAATCGACCATTTGCGTCTTTGTATGCTGTAAAAATTCATATGAAAACTCACAATAAGTGTCATAAATCTAATAAGAATTTGAAAAATCGGTGCAGCATTTGCGGAGCGTCTTATgctcgtgtatttgctttaagTTTACACATCAAGGAACAACATGGCATCAGTGTAGATCCTATAAAGTTGTATGCTGTCGACGAGGGAAATGAAAATACACAAATGCGTATAGAAGATGAAACTGCTTTATTAATTAATGCAGCCAATGGGGCAATTAATCAAGAAATGCATTATATAAATGCCGATGATGAAGAAGTCCCtaatgctgatgatgaagtGGGGGCATATAATAGTCAAGTGGATCATGAGGAAAATATACAGAATACTTTACCAAGTAATATTTATATGGATGAAACTGAAGCTGCtacacaaacaattttaaatacgGAGGAAATTTCCATTGATAATTTTCCAACCGAAGAAATTATAACTGACTGGCTTGTGAAGTAA
Protein Sequence: MAEEIVDLIEESNDERENWIYYSNEIKNQENPESNSFTDVDASQLLYIDSTNLVSTDNEQRFQYDYNDDGIDPSKERTEEPQDNIDVSEHNIILKETIDENGQLVEEYFCGQCNISFNTIEDFLDYHPSLELLNENPEEQDQEQIKPDVVPMAAEDRLWDLVENLDEEKNDVDKDENVEIKPIIANEPDESSQEKEIFNNEIEMDKERYFCYDCQQVFTDLTTAENHDCNNQLQNSNDTSEYVCINIFLSNSYQQVGDHSVYKCHLCNKEYTSFRSFNNHQRWHTNNLHAEPSVCTICNTIFASEKNLKLHMKMHKKHLIKSIQDALPVGAQSEYNELNKFFCEICNKSFDQKLLVIHKNMHQNLEEYTCVKCNKKFENLPSYEIHMQMHVDTVKKGNTSKMSNKTNVLADEDPSTSTRGFIDAGKRKHACQYCGKEFQRPYEKVKHERIHTGEKPYECEVCGKTFRVSYSLTLHLRTHTDIRPYVCATCNKRFKQQSVYVHHLKTHEAECAYKCDICGKSFRTLVQLAGHKNIHIKPYNCTECNRPFASLYAVKIHMKTHNKCHKSNKNLKNRCSICGASYARVFALSLHIKEQHGISVDPIKLYAVDEGNENTQMRIEDETALLINAANGAINQEMHYINADDEEVPNADDEVGAYNSQVDHEENIQNTLPSNIYMDETEAATQTILNTEEISIDNFPTEEIITDWLVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01074699;
90% Identity: iTF_01397729;
80% Identity: -