Basic Information

Insect: Synergus umbraculus
Gene Symbol: -
Assembly: GCA_900474325.1
Location: UCOK01006495.1:75835-79476[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.055 6.3 8.0 1.5 2 21 77 97 76 98 0.94

2 16 5.8e-05 0.0067 17.4 3.2 1 23 106 129 106 129 0.97

3 16 0.016 1.8 9.7 3.0 1 21 206 227 206 231 0.92

4 16 0.0018 0.21 12.6 0.1 3 21 288 307 286 308 0.93

5 16 0.0017 0.2 12.7 0.6 2 20 342 360 341 362 0.94

6 16 1.2 1.4e+02 3.8 1.9 1 22 370 391 370 393 0.79

7 16 0.025 2.9 9.1 0.3 2 21 463 483 462 484 0.94

8 16 0.0016 0.19 12.8 4.5 1 23 501 523 501 524 0.96

9 16 0.023 2.7 9.2 0.4 2 21 597 617 596 618 0.93

10 16 1.4 1.7e+02 3.5 6.7 1 23 626 649 626 649 0.97

11 16 0.0018 0.21 12.6 0.4 2 21 783 803 782 804 0.93

12 16 0.014 1.6 9.9 1.6 2 23 813 835 812 835 0.95

13 16 0.0039 0.44 11.6 1.3 1 21 976 997 976 998 0.95

14 16 1.3 1.5e+02 3.6 4.6 1 23 1006 1029 1006 1029 0.92

15 16 0.00065 0.074 14.1 0.8 3 21 1135 1154 1133 1155 0.94

16 16 0.009 1 10.5 2.0 1 23 1162 1185 1162 1185 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.055	6.3	8.0	1.5	2	21	77	97	76	98	0.94
2	16	5.8e-05	0.0067	17.4	3.2	1	23	106	129	106	129	0.97
3	16	0.016	1.8	9.7	3.0	1	21	206	227	206	231	0.92
4	16	0.0018	0.21	12.6	0.1	3	21	288	307	286	308	0.93
5	16	0.0017	0.2	12.7	0.6	2	20	342	360	341	362	0.94
6	16	1.2	1.4e+02	3.8	1.9	1	22	370	391	370	393	0.79
7	16	0.025	2.9	9.1	0.3	2	21	463	483	462	484	0.94
8	16	0.0016	0.19	12.8	4.5	1	23	501	523	501	524	0.96
9	16	0.023	2.7	9.2	0.4	2	21	597	617	596	618	0.93
10	16	1.4	1.7e+02	3.5	6.7	1	23	626	649	626	649	0.97
11	16	0.0018	0.21	12.6	0.4	2	21	783	803	782	804	0.93
12	16	0.014	1.6	9.9	1.6	2	23	813	835	812	835	0.95
13	16	0.0039	0.44	11.6	1.3	1	21	976	997	976	998	0.95
14	16	1.3	1.5e+02	3.6	4.6	1	23	1006	1029	1006	1029	0.92
15	16	0.00065	0.074	14.1	0.8	3	21	1135	1154	1133	1155	0.94
16	16	0.009	1	10.5	2.0	1	23	1162	1185	1162	1185	0.98

Sequence Information

Coding Sequence: ATGTTCGTTGGTGAAGGGGACCAAGCTGAAGTTGTATGGGAATGTATCAATATATCGgatgaaaatatagaaagcATTGCTAACCGGACAgatgaaattttacgagaagGAAAATTAGCACAGAGGAGGAGGAAATCAGCTCGTTCAGCTAGAGAACCCCAGGTCAAATACTTAACAAGATCTCGTTTTCGATTACCAGAAGAGTCAACAAAAAATAAGTCAGTTCTTGAGTGTCCCAACAAGTGTGGAAGTTCCTTTTTCTATCAGCACACCCTCGATAAGCACGTGCGTCACATTTGTGGAAAACCCTTGAGGTTCCAGTGCCCCCACTGTGACCTTACAACTAGAAATCGTTACAGCCTTACTGTTCACTTGAAATACCGTCATCCCAACCTCAAGAACTTCGTCATTGACACTTTCATTGGAAAACCTGAACCAATTTTCGAAGATTATGACACATCTCAGGAACAACATGTTCAATACTCTTGGAACGAGGAACATGAAATCAAGATCCTAAACGTCTCCAGCCTTGCAAAACCCGAAGACATCAAACAGGAGTTTGAAGATTTCAAGGATGAATCTATCGTTAAGAGTCCGTCGACgaataataagaaattctCGTGCCCCAACAACTGTGGAAATTCATACAAACATGAGTATACTCTAAAAGCTCATTTGGAATTTGCTTGTCACAAAAATGAGACACAGAACAGCTTTCATCTGGATGAAGTTGAATCAGACTCAGAGACATATGACATGCCAATGTTGACAGTTTCAAAGTGTGAGACTTCGGAAGAATTGCCGAATCCCATGGCATTTGGAGAACCTGCAGTGTTGAGGAATGAAGAGGGTAAATGGATTTGCCCAAAAAATTGTGGAGGCACCTACAGCACTAGAGGCAACCTAAATTCTCATTTGCGCAATTATTGTCGAGGTAACCCTGACCTTGAGACGTATAACATTAGAAGTTCTACACCTGAAGTTCCAGAGcctgataaaattcctttaggGAAACGAGAAAAGACTTGTAAGAGCTGTggcaaagaatttaaattgcttCATACCTTGGAGAGACATATTGCTGAAGGCTGTGGAAAACCACCTCGTTTTAAGTGTCCTTACTGCTCCTATCAAGTTAGAAGACTTTCGTACGCTTTCTTTCATATAACAAAGAATCATCCGGGTTTATCGGTTTACATGATGGATTTGCTCACTGGAGACCATATCACTGATCCCAGTCAGATCAAgaaagaagtaatcgaagatATTGAAGAGGAGGAGAAGCcagttaaaaaagaaaagccaCTTAATCCTAATCCAGTACACATTTTAAGATCGAAAAAAGTCCAATCTTCTGTTCCTGCTGGACTTCAGAAAAGGAAACTTGTGTGTCCCAGAGGCTGCGGTcagttctttttctttaaccTCAGTCTTCagaaacatttgaaatacaaatgcaaaaaaaaagctaaaggtttaaaaataaggaagtatGCTCAATTTAAATGTGCATACTgtgaaaatagttttgttcATCGTACGAGCGCTCTGCGACACATCAGGACTCATCATTATGGTAAGAAGAAGTGTGTGATTGATACTTATGAGGAGGAAGTTTTACCCGAGAGTGCCTCAGCGAAAACGAGTAGTCAATCGTATAATCAAGAGACAAAGACTCAAAAAGAGATTCCAAAGACTCAGGGGAAAACCGAGAAGCTGCTAAAATCTACACAACATCAAAATGATACCGAAGGTGCCTCAAACTTTCAGGAAGCTCCCAAGATGATTTATTGCCCTAACAATTGTGGAAGTAAATTTGAACATACATACAACATTACACGACATTTGCGTATATCTTGTGTTAAAGTTCGTCGTTTCCAATGTCCTCATTGCCATTATCGTTCTCATCAATTCAAACTGATTGGAAAGCACATCAAGACGATTCATCGACTGAGCAAGATTTACGCTCTTGATGTTTTCACGAAGCAGCCTATTTATTCTGAACCTACACGTCGTCCTAGGTCCAGTTTTGAGATAATTAAAAGGACTACAAGGGAACCTGGAATTCCAGTGGAACCACAAgttaaagagaaaattaattcagCAGTTCTCAAACAGAAACGTTTTCTTTCGAAGAAACAATTACTTAAAGAAACAAGTAAGAAGTCaaggaaagagaaaaaaactgAAGAGCTGCCGATTGCAACCGGACCAAATAAGATGGTTGGTCAAAGTGTAactaataaagaaatttctagatCTGCCTACCAGTCTCACATTTTGGGGGTGAAAAAGACCTCGAAAAAAAAGACTTCGAAggtcttgaaatataataagcGAAGATTGGAATGTCCTCACAAATGTGGACGTACTTTCATATCCTCTCAAAGGTTGAAAGTACACGCAAGATCAAACTGCAAAAGTGCTCCTTCTTTGAAGTGTCCACATTGTGACGTAATCTGTACATATTCTTGGAATGTTGCTATGCACATTAAATATCGTCATCCGGAGATCGAGGTTGAaggaaatcataaaaaaaataaagattttaatcatgcaaatataactggaaaagaattgatgaatttcactgaaaaaattgCAGATAAATCAAAGGGAGTAGAACTATCAGGACAAAGCAGCAATGCTGAAATTAACAATGATATCGAAGAGGATGTGGAGATGGAAGAAAGTGTAACCGAAAATGTTGCTATTGAAAGTGCTAACAATGTAGAAGATGCGGGAAAGATTGAAAATGCTGAGGTTCAAAATGACGAAGATGCTGATATTGAATTTGAGCTTGACGATGAGAATGAGAATGAAAACGAGATGGTACAAGATACAACATATGGAGGAGATTTAAATTCCACTGCCAACATTTCCCGAAATTCAAGCAACCTGAGTAATTCAAATTcgccaaaaaaatttaactgtcCTAATAATTGTGGAAGTTCTTATTCGAATCATAACAGTTTGAAGACACACTTGCGTTACGCATGTGGTCAAAAGCCACGTTTTCGCTGTCCTTGGTGCGATCATTGCTCGAAACAAACTTCAAATGGTTATTCGCACGTGAAGAAGATGCACGAGGGTTGTCAAATTTATCTGATTGATATCGTcactaataaaattatctctGGGTCGAGGTATCAACCAAACAAAGGTTCTCAACCAGAAGTTCTGGAAAATCAAATTGTTGGGAAGAATGATCttgctgaaaataaaaattctactgCAAACCAAGAAGTTGTTGGGATGGAACAAGTCGAAGCTATAGGTGATGATTTAAACGATGAACCGGATGAGCCAGATGAGCCTATTGTAGGAACTGAGGAGGAATTTGGAACAGCTGGTCCGGCAACAACACAAAAATTATCAGCAGAGAAGGACAAGTCTTTAATTTGTCCAAACAACTGTGGCAGTTCATTTAGTCATGAGCACAGCTTAACTAGACACCTTAGAGATCAATGTGGCCCTCCTCGTTATAAATGCCCTCATTGTTTCTACATCACGAGGGAACCTTCAAATGTCTACTTACATATTCAGAAGAAGCATCCAAATGAGAGAATTTACATGATCGATACTGACATGAACCAAAGCTGCGACGAACCAGGGTCCCCTCCTGGAGAGGAAGAAAATTAG
Protein Sequence: MFVGEGDQAEVVWECINISDENIESIANRTDEILREGKLAQRRRKSARSAREPQVKYLTRSRFRLPEESTKNKSVLECPNKCGSSFFYQHTLDKHVRHICGKPLRFQCPHCDLTTRNRYSLTVHLKYRHPNLKNFVIDTFIGKPEPIFEDYDTSQEQHVQYSWNEEHEIKILNVSSLAKPEDIKQEFEDFKDESIVKSPSTNNKKFSCPNNCGNSYKHEYTLKAHLEFACHKNETQNSFHLDEVESDSETYDMPMLTVSKCETSEELPNPMAFGEPAVLRNEEGKWICPKNCGGTYSTRGNLNSHLRNYCRGNPDLETYNIRSSTPEVPEPDKIPLGKREKTCKSCGKEFKLLHTLERHIAEGCGKPPRFKCPYCSYQVRRLSYAFFHITKNHPGLSVYMMDLLTGDHITDPSQIKKEVIEDIEEEEKPVKKEKPLNPNPVHILRSKKVQSSVPAGLQKRKLVCPRGCGQFFFFNLSLQKHLKYKCKKKAKGLKIRKYAQFKCAYCENSFVHRTSALRHIRTHHYGKKKCVIDTYEEEVLPESASAKTSSQSYNQETKTQKEIPKTQGKTEKLLKSTQHQNDTEGASNFQEAPKMIYCPNNCGSKFEHTYNITRHLRISCVKVRRFQCPHCHYRSHQFKLIGKHIKTIHRLSKIYALDVFTKQPIYSEPTRRPRSSFEIIKRTTREPGIPVEPQVKEKINSAVLKQKRFLSKKQLLKETSKKSRKEKKTEELPIATGPNKMVGQSVTNKEISRSAYQSHILGVKKTSKKKTSKVLKYNKRRLECPHKCGRTFISSQRLKVHARSNCKSAPSLKCPHCDVICTYSWNVAMHIKYRHPEIEVEGNHKKNKDFNHANITGKELMNFTEKIADKSKGVELSGQSSNAEINNDIEEDVEMEESVTENVAIESANNVEDAGKIENAEVQNDEDADIEFELDDENENENEMVQDTTYGGDLNSTANISRNSSNLSNSNSPKKFNCPNNCGSSYSNHNSLKTHLRYACGQKPRFRCPWCDHCSKQTSNGYSHVKKMHEGCQIYLIDIVTNKIISGSRYQPNKGSQPEVLENQIVGKNDLAENKNSTANQEVVGMEQVEAIGDDLNDEPDEPDEPIVGTEEEFGTAGPATTQKLSAEKDKSLICPNNCGSSFSHEHSLTRHLRDQCGPPRYKCPHCFYITREPSNVYLHIQKKHPNERIYMIDTDMNQSCDEPGSPPGEEEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01391485; iTF_01390611; iTF_01392286; iTF_01393065; iTF_01389746; iTF_01393814;
90% Identity: iTF_01391485;
80% Identity: -