Basic Information

Insect: Synergus magnus
Gene Symbol: -
Assembly: GCA_032275165.1
Location: JAUESH010000015.1:12872348-12876031[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.058 7.6 8.0 1.5 2 21 77 97 76 98 0.94

2 15 0.00013 0.017 16.3 3.1 1 23 106 129 106 129 0.97

3 15 0.016 2.2 9.7 3.0 1 21 206 227 206 231 0.92

4 15 0.00067 0.088 14.1 0.1 3 22 288 308 286 308 0.93

5 15 0.0018 0.24 12.7 0.6 2 20 343 361 342 363 0.94

6 15 1.2 1.6e+02 3.8 1.9 1 22 371 392 371 394 0.79

7 15 0.11 14 7.2 0.4 2 21 469 489 468 490 0.93

8 15 0.0017 0.23 12.8 4.5 1 23 507 529 507 530 0.96

9 15 0.067 8.8 7.8 0.4 2 21 603 623 602 624 0.93

10 15 0.00044 0.058 14.6 0.5 1 21 785 806 785 807 0.95

11 15 0.075 9.9 7.6 3.4 2 23 816 838 815 838 0.95

12 15 0.00064 0.084 14.1 0.3 1 21 986 1007 986 1008 0.96

13 15 1.4 1.9e+02 3.6 4.6 1 23 1016 1039 1016 1039 0.92

14 15 0.00026 0.035 15.4 3.0 1 21 1147 1168 1147 1169 0.95

15 15 0.0084 1.1 10.6 2.4 1 23 1176 1199 1176 1199 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.058	7.6	8.0	1.5	2	21	77	97	76	98	0.94
2	15	0.00013	0.017	16.3	3.1	1	23	106	129	106	129	0.97
3	15	0.016	2.2	9.7	3.0	1	21	206	227	206	231	0.92
4	15	0.00067	0.088	14.1	0.1	3	22	288	308	286	308	0.93
5	15	0.0018	0.24	12.7	0.6	2	20	343	361	342	363	0.94
6	15	1.2	1.6e+02	3.8	1.9	1	22	371	392	371	394	0.79
7	15	0.11	14	7.2	0.4	2	21	469	489	468	490	0.93
8	15	0.0017	0.23	12.8	4.5	1	23	507	529	507	530	0.96
9	15	0.067	8.8	7.8	0.4	2	21	603	623	602	624	0.93
10	15	0.00044	0.058	14.6	0.5	1	21	785	806	785	807	0.95
11	15	0.075	9.9	7.6	3.4	2	23	816	838	815	838	0.95
12	15	0.00064	0.084	14.1	0.3	1	21	986	1007	986	1008	0.96
13	15	1.4	1.9e+02	3.6	4.6	1	23	1016	1039	1016	1039	0.92
14	15	0.00026	0.035	15.4	3.0	1	21	1147	1168	1147	1169	0.95
15	15	0.0084	1.1	10.6	2.4	1	23	1176	1199	1176	1199	0.98

Sequence Information

Coding Sequence: ATGTTTCTTGGTGAAGGGGACCAAGCTGAGGTTGTATGGGAGTGTATCAATATATCGgatgaaaatatagaaagcATTGCTAACCGAACAGACGAAATTTTGCGAGAAGGAAAATTAGCACAGAGAAGAAAGAAAGCAGCTCGTCCAGTTAGAGAACCCCAGGTCAAATACCTAACAAGATCTCGTTTTCGATTACCAGAAGAGTCAACAAAAAATAAGTCAGTTCTTGAATGTCCCAACAAGTGTGGAAGTTCCTTTTTCTATCAGCACACCCTCGACAAGCACGTACGTCACATTTGTGGTAAACCCATGAGATACAAGTGCCCCCACTGCGACCTTTCAACTAGAAATCGTTATAGCGTTACCGTTCACATGAAATATCGTCATCCCGACCTCAAGAACTACGTCATTGACACCTTCATCGGAAAACCTGAACCAATTTTCGAAGATTATGACACATCTCAGGAACAGCATGTTCAATACTCTTGGAACGAGGAACACGAAATCAAGATCCTAAACGTCTCCAGCCTTGCAAAACCCGAAGACATCAAACAGGAGtttgaagatttcaaggatgAATCCATGACCAAGAGCCCGTCGACGAATAATAAAAGATTCTCTTGTCCCAACAACTGTGGCAATTCATACAAACACGAGTATACTCTAAAAGCTCATTTGGAATTTGCCTGTCACAAAAATCAAGTACAGAACAGCTTCCATCTGGATGAAGATGAATCAGACTCCGAGACACATGGCATGCCAATGTTGACAGTTACAAAGTTTGAGACTCCAGAAGAATTGCCGAATCCCATGGCGTTTGGGGAATCTTCCGAGTTGAAGAATGAAGAGGGTAAATGGATTTGCCCGAAAAATTGTGGAGGTACCTTTAGCACTCGAGGCAACCTAAATTACCATTTGCGAAAATATTGTCGAGCTGGCTCTGAGGTTGAGACGTATAACACCAGTGACGAATCTACACTTAAAGTTCCAGAACCTGGCAAAATGCCTTTAGGGAGGCGGGAGAAGACTTGCAAGAGCTGTGGCAAAGAATTTAAGTTGCTTCATACGTTGGAGAGACATATTGCTGAAGGCTGTGGAAAACCACCTCGTTTTAAGTGTCCTTACTGCTCCTATCAAGTGAGAAGACTTTCGTACGCTTTCTTTCATATAACGAAGAATCATCCAGGTTTATCGGTTTACATGATGGATTTGCTCACTGGCGACAATATCACCGATCCCAGCCAGATCAAGAAAGAAGTGGTCGAAGATATTGAAGAGGAGAAGCCAGCTAAGAAAGAGAAGCCAGATAAAAAAGAGAAGCCACTTGCTCCTAATCCAGTGCACATTTTGAGATCGAAAAAAGTCCAGCGTTCTGTTCCTGGTGGACTTCAGAAAAGGAAACTGGTGTGTCCCAAAGGCTGCGGTCAGTTCTTCTTCTTCACCCTCAGTCTtcagaaacatttaaaatacaaatgcaaaaaaaatgctaAAGGTTTCAAAATAAGGGAGTATGCTCGATTCAAATGTGCCTACTGTGAGAATAGTTTTGTTCATCGTACGAGTGCCCTGCGGCACATAAGGACTCATCATTACGGCAAGAAGAAATGTGTGATTGATGTTTACGAGGAGGAAATTGTACCCGAGAGTGCTTCAGCGAAAATGCGTAGTCAATCGTATAATCAAGAGATAAAGACTCAAAAGGAGATTCCAAAGACTCAGGGGAAAACCGAAAAACTGCCGAAATCCATACATCATCAAAATGATACCGAAGGTGCCTCAAACTTACAGGAAGCTCCCAAGATGATTTATTGCCCTAACAATTGCGGAAGTAAGTTTGAGCATACATACAATATTTCTCGACATTTGCGTATATCTTGCGTTAAAGTTCGTCGTTTCCAATGTCCACATTGCAATTATCGATCTCATCAATTCAAACTGATTGGAAAGCACTTCAAGAGGACTCATCGACTGAGCAAGATTTACGCTCTTGATGTTTTCACGAAGCAGCCTATTTATTCGGAGCCTGTACGTCGTCCTCGGTCCTCTTTTCAGATAATTAAAAGAACCACGAGGGAATCTGGCATTCCAGCGGAACCACAAGTTAAAGAGAAAATCAATTCAGCACTTCTCAAACAGAAACGCTTTATTTCGAAGAAACAATTACTTAAAGAAGCAGGCAAGAAGCCaaggaaagagagaaaaactgAAGAGCTGTCGATTGCAACTGGATCAAATAAGATGGTTGGTCAAACTGTCACTAATGAAGGAATTTCTGGAGCTGTCCATCAGCCTCACTTTTTGGGTGTGTCAACTAAAAAGAAGGCATCGAAGGCCTTGAAGTATAAGCGAAGATATGAATGTCCTCACAAATGTGGACGTACTTTCATATCCTCTCAAAGGCTGAGAGTACACGCAAGATCAAACTGCAATAGCGCTGTCTCTATGAAGTGTCCACATTGTGACGTAATTTGTACATATTCTTGGAACGTTGCTATGCACATTAAACACCGTCATCCTGAATATTCGAGTGGCAGTAAACAGCAAGAGGTCGAGGTTGAAGGAAatcataaaaacaataaagattttaagcatGCCAATGGAATTGGAGAAGAATTGATGAATGATGAAGAAATTGCAGATGAATCAAAGGATGTTGAGCCATCCGGACGAAGCAGCAATGctgaaattgataataatatcGAAGAGGATGTGGAGATGGAAGAAAATGTAACCGAAAATGTTGCTATTGACAATGCTAACAAGGTGGAAGCTGCGGAAAAGGTTGAAAATGATGTTCAAAATGACGAAGATGATGATATTGAATTTGAGCTTGAAGATGAAAATGAGATGGAAGACGAGATGGAACAAGAGAAATCACATGGAGTAGATTTAAATTCCACTGCCTACATTACTCGAAATACGAGAAACTTGAGTAATCCAACTTCACCGAAAAGATTTTCCTGTCCTAATAATTGTGGAAGTTCTTATTCGAATCCCAACAGTTTGAAGACACACTTGCGTTATGCATGTGGTCAAAAGCCACGTTTTCGCTGTCCGTGGTGCGATCACTGCTCGAAACAAACTTCAAATGGTTATTCGCATGTGAAGAAGATGCACGAGGGTTGTCAAATTTATCTGATTGATATCGTcactaataaaattatctcCGGATCGAGGTATCAACCATCCAAAGGAATACCAgagattcttgaaaatcaaaatgctAGAAAACAAGTTGTTAGACAGAATGATCttgctgaaaataaaaatgctctTGCAAATCAAGAAGCTGTTGGAATGGAACAAGTCGAAGCTATGGGTGAAGATTTAAACGATGAACCGGATGAGCCAGATGAACCAATTGTAGGAACTGAGGAGGAATTTGGAACACCTGGTCCTGCAGCAACACAAAAATTATCACCAGAGAAAGACAAATCTTTCATTTGTCCAAACAACTGTGGCTGTTCATTTAGTCATGAGCACAGCTTAACCAGACACCTCAGAGATCGATGTGGCCCTCCTCGTTATAAATGTCCTCATTGTTTTTACATCACGAGGGAACCTTCAAATGTCTACTTACACATCAAGAAGAAGCATCCAAACGAGAGGATTTACATGATCGATACTGACATGAACCAAAGCTGCGACGAACCTGGGTCCCCTCCTAGAGatgatgaaaattaa
Protein Sequence: MFLGEGDQAEVVWECINISDENIESIANRTDEILREGKLAQRRKKAARPVREPQVKYLTRSRFRLPEESTKNKSVLECPNKCGSSFFYQHTLDKHVRHICGKPMRYKCPHCDLSTRNRYSVTVHMKYRHPDLKNYVIDTFIGKPEPIFEDYDTSQEQHVQYSWNEEHEIKILNVSSLAKPEDIKQEFEDFKDESMTKSPSTNNKRFSCPNNCGNSYKHEYTLKAHLEFACHKNQVQNSFHLDEDESDSETHGMPMLTVTKFETPEELPNPMAFGESSELKNEEGKWICPKNCGGTFSTRGNLNYHLRKYCRAGSEVETYNTSDESTLKVPEPGKMPLGRREKTCKSCGKEFKLLHTLERHIAEGCGKPPRFKCPYCSYQVRRLSYAFFHITKNHPGLSVYMMDLLTGDNITDPSQIKKEVVEDIEEEKPAKKEKPDKKEKPLAPNPVHILRSKKVQRSVPGGLQKRKLVCPKGCGQFFFFTLSLQKHLKYKCKKNAKGFKIREYARFKCAYCENSFVHRTSALRHIRTHHYGKKKCVIDVYEEEIVPESASAKMRSQSYNQEIKTQKEIPKTQGKTEKLPKSIHHQNDTEGASNLQEAPKMIYCPNNCGSKFEHTYNISRHLRISCVKVRRFQCPHCNYRSHQFKLIGKHFKRTHRLSKIYALDVFTKQPIYSEPVRRPRSSFQIIKRTTRESGIPAEPQVKEKINSALLKQKRFISKKQLLKEAGKKPRKERKTEELSIATGSNKMVGQTVTNEGISGAVHQPHFLGVSTKKKASKALKYKRRYECPHKCGRTFISSQRLRVHARSNCNSAVSMKCPHCDVICTYSWNVAMHIKHRHPEYSSGSKQQEVEVEGNHKNNKDFKHANGIGEELMNDEEIADESKDVEPSGRSSNAEIDNNIEEDVEMEENVTENVAIDNANKVEAAEKVENDVQNDEDDDIEFELEDENEMEDEMEQEKSHGVDLNSTAYITRNTRNLSNPTSPKRFSCPNNCGSSYSNPNSLKTHLRYACGQKPRFRCPWCDHCSKQTSNGYSHVKKMHEGCQIYLIDIVTNKIISGSRYQPSKGIPEILENQNARKQVVRQNDLAENKNALANQEAVGMEQVEAMGEDLNDEPDEPDEPIVGTEEEFGTPGPAATQKLSPEKDKSFICPNNCGCSFSHEHSLTRHLRDRCGPPRYKCPHCFYITREPSNVYLHIKKKHPNERIYMIDTDMNQSCDEPGSPPRDDEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01394644;
90% Identity: -
80% Identity: -