Basic Information

Insect: Synergus laeviventris
Gene Symbol: -
Assembly: GCA_032275145.1
Location: JAUESI010000008.1:3635171-3638821[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.15 21 6.5 0.7 2 21 77 97 76 98 0.94

2 16 0.05 6.8 8.1 6.0 1 21 106 126 106 129 0.96

3 16 0.25 34 5.9 3.4 1 21 206 227 206 231 0.91

4 16 0.00043 0.059 14.6 0.4 3 21 288 307 286 308 0.92

5 16 0.0041 0.56 11.5 0.6 2 20 342 360 341 362 0.94

6 16 0.58 79 4.7 1.6 1 15 370 384 370 393 0.82

7 16 0.067 9.2 7.7 0.4 2 21 462 482 461 483 0.93

8 16 0.0021 0.28 12.4 6.7 1 23 500 522 500 523 0.96

9 16 0.046 6.3 8.2 0.2 2 21 596 616 595 617 0.93

10 16 0.3 41 5.6 2.5 1 23 625 648 625 648 0.97

11 16 0.0034 0.46 11.7 0.4 2 21 779 799 778 800 0.92

12 16 0.069 9.3 7.6 3.4 2 23 809 831 808 831 0.95

13 16 0.011 1.5 10.2 2.6 1 21 981 1002 981 1003 0.95

14 16 1.3 1.8e+02 3.6 4.6 1 23 1011 1034 1011 1034 0.92

15 16 0.0058 0.79 11.0 0.2 3 21 1139 1158 1137 1159 0.94

16 16 0.0077 1 10.6 2.4 1 23 1166 1189 1166 1189 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.15	21	6.5	0.7	2	21	77	97	76	98	0.94
2	16	0.05	6.8	8.1	6.0	1	21	106	126	106	129	0.96
3	16	0.25	34	5.9	3.4	1	21	206	227	206	231	0.91
4	16	0.00043	0.059	14.6	0.4	3	21	288	307	286	308	0.92
5	16	0.0041	0.56	11.5	0.6	2	20	342	360	341	362	0.94
6	16	0.58	79	4.7	1.6	1	15	370	384	370	393	0.82
7	16	0.067	9.2	7.7	0.4	2	21	462	482	461	483	0.93
8	16	0.0021	0.28	12.4	6.7	1	23	500	522	500	523	0.96
9	16	0.046	6.3	8.2	0.2	2	21	596	616	595	617	0.93
10	16	0.3	41	5.6	2.5	1	23	625	648	625	648	0.97
11	16	0.0034	0.46	11.7	0.4	2	21	779	799	778	800	0.92
12	16	0.069	9.3	7.6	3.4	2	23	809	831	808	831	0.95
13	16	0.011	1.5	10.2	2.6	1	21	981	1002	981	1003	0.95
14	16	1.3	1.8e+02	3.6	4.6	1	23	1011	1034	1011	1034	0.92
15	16	0.0058	0.79	11.0	0.2	3	21	1139	1158	1137	1159	0.94
16	16	0.0077	1	10.6	2.4	1	23	1166	1189	1166	1189	0.98

Sequence Information

Coding Sequence: ATGTTTGTTGGTGAAGGGGACCAAGCTGAAGTTGTATGGGAGTGTATCAATATATCAGacgaaaatattgaaagcaTTGCTAACCGGACagatgaaattttgagagaaGGAAAATTAGCACAGAGAAGGAAAAAAGCAGGTCGTCTAGTTAGAGAACCCCAAGTCAAATACCTAACAAGATCTCGTCTTCGAGTACCAGAAGAgtcaacaaaaaataagtCAGTTCTTGAATGTCCTAACAAGTGTGGGAATTCCTTTTTACATCAGAACGCCCTCGATAAGCACATACGTCACATTTGTGGTAAGCTCATGAGGTACAAGTGCCCCTACTGCGACCTTATAACTAAAAAGCGTTACTGCCTATCCGTTCACATGAAATGTCGTCATCCTGGTCTCAAGAACTATGTTATTGACAACTGTATCGTAAAAGCTGAACCAATTTTCGAAGATTGCGATACATCTCAGGTAGAACATGTTCAATACTCTTGGAACGAGGAACACGAAATCAAGATCCTAAACGTCTCCAGCCTTGCAAAGCCCGAAGATATCAAACAGgagtttgaatatttcaaggatGAATCTATCACCAAGAGTCCGTCGACGAATAATAAGAGATTCTTTTGTCCAAACAACTGTGGCAGTTCATACAAACACGATTATACTCTAAAAGCTCATTTGGAATTTGCCTGTCACAAAAATCAGGCACAGAACAGCTTCCATCTGGATGAAGATGAATCAGACTCAGAGCCATATGGCATGCCAGTGTTGGCAGTTACAAAGTTTGAGGCTCCAGAAGAATTGCCAAATCCCATGGCATATGGTGAATCTTTAGAGTTGAAGAATGAAGAGGGTAAATGGATTTGCTCGAAAAATTGTGGAAGCACCTTTAGCACTcgaagcaatttaaattaccATTTGCGCAATTATTGTCGAGCTAACACTGAGCTTAAGAGGTATAAAATCAAAAGTTCTACACCTTCAGTTCCAGAACCTAAAAAAGTCCCTTTAGGGAAGCGGGAAAAGACATGTAAGAGCTgtggaaaagaatttaaattgcttcatACTTTGGAGAGACATGTTGCTGAAGGCTGTGGAAAACCACCTCGTTTTAAGTGTCCTTACTGCAACTATCAAGTAAGAAGACTATCGTACGCTTTCTTTCATGTAACGAAGAATCATCCAGGTTTATCAGTTTACATGATGGATTTGCTCACTGGAGAAAATATCACCGATTCCAGTCAGATCAAGAAAGAAGCAGTCGAAGATATTGAAGAGGATAACtcatataaaaaagagaagcCACTTGCTCCTAATCCAGTGCACATTTTAAGAACGAAAAAAGTCAAGCATTCTGTTCCTGCTGGACTTCAGAAGAGAAAACTGATGTGTCCTAAAGGCTGCGGTCAGTTCTTCTTCTTTACCCTCAGTcttcaaaaacatttaagatacacatgcaaaaaaaaagctaAAGGTTTGAAAATAAGGGATTATCTTCAATTCAAATGTGCATACTGTGAACATAGTTTTGTTCATCGTACTAGCGCCCTGAGACACATAAGGACTCATCATTACGGCAAGAAGTACTATGTGATTGATACTTACGAGGAGGAAATTGTACCCGAGAGTTCTTCTGTGAAAATGCGTAGTCAATCGTATAATCAAGAGATAAAGACTCAAAAGGAGATTCCAAAGACTCAGAGGAAAACCGAGAAGCTGCCGAAATCCACACATCATCAAAATGATGTCGAAGGTACCTCAAACTTACAGGAAGTTCCCAAAATGATTTATTGTCCGAACAATTGCGGAAGTAGGTTTGAGCATACATACAACATTGCTCGACATTTGCGTATATCTTGTGTTAAAGTTCGTCGTTTCCAATGTCCACAATGCAATTATCGGTCACATCAATTCCGACTGATTGGAAAACACATCAAGACGATTCATCGACTGAGCAAGATCTACGCTCTTGATGTTTTCACGAAGCAGCCTATTTACTCTGAACCAGAACGTCGTCCTCGCtcttttcatataattaaaaggaCTGCGAGGGAACCTGGCATTCCAGCGGAAGCACAAGtcagagaaaaaattagttcaGCACTCCTCAAACAGAAACGCCTTATTTCgaacaaaaaattacttaaaaaaaaaggcaagaagtcaagaaaagagaaaaaaactgAAACGCTATTGACTGCAGCTGGATTAAATAAGGTAGTTGATCAAACTGTCACTAATGAAGAAATCTCTAGAGCTGCCCATCAGTCTCACTTTTTGGATGTGTCAGCCAAAAAGAAGACCTTGATGtccttgaaatataataagcGGAGATTGGAGTGTCCTCATAAATGTGGACGTACATTCATATCATCTCAAAGATTGAGAGTACACGCAAAATCAAATTGTAAAAGCGTTTCTTCTATGAAGTGTCCACATTGTGACGTAATTTGTACATATTCTTGGAACGTTGCTATGCACATTAAGCACCGTCAtcctgaatttttaaatgttagtAAAGAGGAAGAGGTCGAGGTTGAAGGAAATCATGAAAACAatgaagattttaagaatgCTAATGGAACCAGAGAAGAATTGACGAATTTCACTGAAGAAATTGGAACAGAATCAAAGGAAGTAAAACCATCAGGAGGAAGCAGCAATGTTGAAATTGACAATGTTATTGAAGAGGATGTGGAGATGGAAGAAAATATAACCGAAAATGTTGCTATTGACAATGCTAACAAGGTGAAAGCTGCCGAAAACGTTGAAAATACTGAAGTTCAAAATAACGAAAATGATGATATTGAAATGGAACTAGAAGATGAAAATGAGATTGAAAATGAGATGGTACAAGAGACATCATATGAAGGAGATTTAAATTCCACTGCCAACATTTCCCGAAGTACGAGCAACTTGAATAATTCAACTTCGCCGAAAAAATTTGCCTGCCCAAATAATTGTGGTAGCTGTTATTCGAATCACAATAGTTTGAAGACACACTTGCGCTACGCATGTGGTCAAAAGCCACGTTTTCGCTGTCCGTGGTGCGATCACTGCTCGAAACAAACTTCAAATGGTTATTCGCACGTGAAGAAGATGCACGAGGGTTGTCAAATTTATCTGATTGATAtcgttaataataaaattatctctGGATCGAGGTATCAACCATCCACAGGGACATCAGAGGTTCTTGAAAATCAAGATGATAGACACAATGATCTTGCTGAAAATCAAGATGCGTCTGCAAACCAAGAAGTTGTTGGAATGGATCAAGTAGAAGCTATAGGTGATGATTTAAACGATGAACCGGATGAGCCAGATGAACCTATTGTAGGAACTGAGGAGGAATTTGGAACACCTGGTCCTGCAGTAACACAAAAATCATCACCAGAGAAGGACAAATCTTTAATTTGTCCAAACAACTGTGGTAGCTCATTCAGTCTTGAGCACAGTTTAACCAGACACCTTAGAGATCAATGTGGCCCTCCTCGTTATAAATGTCCTCATTGTTTCTACATCACAAGGGAACCTTCAAATGTCTATTTACACATCAAAAAGAAGCATCCAAACGAGAGGATTTACATGATCGATACTGACATGAACCAAAGCTGCGATGAACCTGAGTCTCCTGGCGAGGATGGAAATTAA
Protein Sequence: MFVGEGDQAEVVWECINISDENIESIANRTDEILREGKLAQRRKKAGRLVREPQVKYLTRSRLRVPEESTKNKSVLECPNKCGNSFLHQNALDKHIRHICGKLMRYKCPYCDLITKKRYCLSVHMKCRHPGLKNYVIDNCIVKAEPIFEDCDTSQVEHVQYSWNEEHEIKILNVSSLAKPEDIKQEFEYFKDESITKSPSTNNKRFFCPNNCGSSYKHDYTLKAHLEFACHKNQAQNSFHLDEDESDSEPYGMPVLAVTKFEAPEELPNPMAYGESLELKNEEGKWICSKNCGSTFSTRSNLNYHLRNYCRANTELKRYKIKSSTPSVPEPKKVPLGKREKTCKSCGKEFKLLHTLERHVAEGCGKPPRFKCPYCNYQVRRLSYAFFHVTKNHPGLSVYMMDLLTGENITDSSQIKKEAVEDIEEDNSYKKEKPLAPNPVHILRTKKVKHSVPAGLQKRKLMCPKGCGQFFFFTLSLQKHLRYTCKKKAKGLKIRDYLQFKCAYCEHSFVHRTSALRHIRTHHYGKKYYVIDTYEEEIVPESSSVKMRSQSYNQEIKTQKEIPKTQRKTEKLPKSTHHQNDVEGTSNLQEVPKMIYCPNNCGSRFEHTYNIARHLRISCVKVRRFQCPQCNYRSHQFRLIGKHIKTIHRLSKIYALDVFTKQPIYSEPERRPRSFHIIKRTAREPGIPAEAQVREKISSALLKQKRLISNKKLLKKKGKKSRKEKKTETLLTAAGLNKVVDQTVTNEEISRAAHQSHFLDVSAKKKTLMSLKYNKRRLECPHKCGRTFISSQRLRVHAKSNCKSVSSMKCPHCDVICTYSWNVAMHIKHRHPEFLNVSKEEEVEVEGNHENNEDFKNANGTREELTNFTEEIGTESKEVKPSGGSSNVEIDNVIEEDVEMEENITENVAIDNANKVKAAENVENTEVQNNENDDIEMELEDENEIENEMVQETSYEGDLNSTANISRSTSNLNNSTSPKKFACPNNCGSCYSNHNSLKTHLRYACGQKPRFRCPWCDHCSKQTSNGYSHVKKMHEGCQIYLIDIVNNKIISGSRYQPSTGTSEVLENQDDRHNDLAENQDASANQEVVGMDQVEAIGDDLNDEPDEPDEPIVGTEEEFGTPGPAVTQKSSPEKDKSLICPNNCGSSFSLEHSLTRHLRDQCGPPRYKCPHCFYITREPSNVYLHIKKKHPNERIYMIDTDMNQSCDEPESPGEDGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01394644;
90% Identity: -
80% Identity: -