Basic Information

Insect: Synergus itoensis
Gene Symbol: -
Assembly: GCA_904066005.1
Location: CAJFCP010000088.1:88271-91936[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.055 7.5 8.0 1.5 2 21 77 97 76 98 0.94

2 16 4.9e-05 0.0067 17.6 3.5 1 23 106 129 106 129 0.97

3 16 0.016 2.1 9.7 3.0 1 21 206 227 206 231 0.92

4 16 8.8e-05 0.012 16.8 0.2 3 21 288 307 286 308 0.94

5 16 0.0046 0.62 11.4 0.9 2 20 342 360 341 362 0.94

6 16 1.2 1.6e+02 3.8 1.9 1 22 370 391 370 393 0.79

7 16 0.025 3.4 9.1 0.3 2 21 462 482 461 483 0.94

8 16 0.0017 0.23 12.8 4.5 1 23 500 522 500 523 0.96

9 16 0.064 8.7 7.8 0.4 2 21 596 616 595 617 0.93

10 16 0.99 1.4e+02 4.0 4.6 1 23 625 648 625 648 0.97

11 16 0.0018 0.25 12.6 0.4 2 21 782 802 781 803 0.93

12 16 0.014 1.9 9.9 1.6 2 23 812 834 811 834 0.95

13 16 0.0014 0.2 13.0 0.4 1 21 984 1005 984 1006 0.95

14 16 1.4 1.8e+02 3.6 4.6 1 23 1014 1037 1014 1037 0.92

15 16 0.00065 0.089 14.1 0.8 3 21 1143 1162 1141 1163 0.94

16 16 0.009 1.2 10.5 2.0 1 23 1170 1193 1170 1193 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.055	7.5	8.0	1.5	2	21	77	97	76	98	0.94
2	16	4.9e-05	0.0067	17.6	3.5	1	23	106	129	106	129	0.97
3	16	0.016	2.1	9.7	3.0	1	21	206	227	206	231	0.92
4	16	8.8e-05	0.012	16.8	0.2	3	21	288	307	286	308	0.94
5	16	0.0046	0.62	11.4	0.9	2	20	342	360	341	362	0.94
6	16	1.2	1.6e+02	3.8	1.9	1	22	370	391	370	393	0.79
7	16	0.025	3.4	9.1	0.3	2	21	462	482	461	483	0.94
8	16	0.0017	0.23	12.8	4.5	1	23	500	522	500	523	0.96
9	16	0.064	8.7	7.8	0.4	2	21	596	616	595	617	0.93
10	16	0.99	1.4e+02	4.0	4.6	1	23	625	648	625	648	0.97
11	16	0.0018	0.25	12.6	0.4	2	21	782	802	781	803	0.93
12	16	0.014	1.9	9.9	1.6	2	23	812	834	811	834	0.95
13	16	0.0014	0.2	13.0	0.4	1	21	984	1005	984	1006	0.95
14	16	1.4	1.8e+02	3.6	4.6	1	23	1014	1037	1014	1037	0.92
15	16	0.00065	0.089	14.1	0.8	3	21	1143	1162	1141	1163	0.94
16	16	0.009	1.2	10.5	2.0	1	23	1170	1193	1170	1193	0.98

Sequence Information

Coding Sequence: ATGTTTGTTGGTGAAGGTGACCAAGCTGAAGTTGTATGGGAGTGTATCAATATATCGGACGAAAATATAGAAAGCATTGCCAACCGGACAGATGAAATTTTGCGAGAAGGAAAATTAGCACAGAGGAAGAGGAAAGCAGCTCGTCCAGCTAGAGAACCCCAGATCAAATACTTAACAAGATCTCGTTTTCGAGTACCAGAAGAGTCAACAAAAAATAAGTCAGTTCTTGAATGTCCCAACAAGTGTGGGAGTTCCTTTTTCTACCAGCATACTCTAGATAAGCACGTGCGTCACATTTGTGGTAAACCCTTGAGGTACAAGTGCCCCCACTGCGACCTTACAACTAGAAATCGTTACAGCCTTACTGTTCACTTGAAATATCGTCATCCCAATCTCAAGGACTACGTCATTGACACTTTCATCGGAAAACCTGAACCAATTTTCGAAGATTATGACACATCTCAGGAACAACATGTTCAATACTCTTGGAACGAGGAACACGAAATCAAGATCCTAAACGTCTCCAGCCTTGCAAAACCCGAAGACATCAAACAGGAGTTTGAAGATTTCAAAAATGAATCTATCGTCAAGAGTCCGTCGACGAATAATAAGAAATTCTCTTGCCCCAACAACTGTGGAAATTCATACAAACACGAATATACTCTAAAAGCTCATTTGGAATTTGCCTGTCACAAAAATCAGACACAGAACAGCTTCCATCTGGATGAAGATGAATCAGGCTCAGAGACATATGGCATGCCAATGTTGACAGTTTCAAAGATTGAGACTCCGGAAGAATTGCCGAATCCCATGGCATTTGGGGAATCTTCAGTGTTGAAGAATGAAGAGGGTAAATGGATTTGCCCAAAAAAATGTGGAGGCACCTATAGCACTCGAAGCAACCTAAATTCCCATATGCGCAATTATTGTCGAGGTAACCCTGACCTTGAGACGTATAACATTAGAGGCTCTACACCTAAAGTTCCAGAACATGATAAAATTCCTTTAGGGAAACGACAAAAGACTTGTAAGAACTGTAGCAAAGAATTTAAATTGCTTCATACCTTGGAGAGACATATTGCTGAAGGCTGTGGAAAACCACCTCGTTTTAAGTGTCCTTACTGCTCCTATCAAGTTAGAAGACTCTCGTATGCTTTCTTCCACATAACGAAGAATCATCCAGGTTTATCGGTTTATATGATGGATTTGCTCACTGGAGATCATATCACTGATCCCAGCCAGATAAAGAAAGAAGTAGTCGAAGATATTGAAGAGGAGAAGCCAGCTAAAAAAGAAAAGCCACTTGCTCCTAATCCAGTGCACATTTTAAGAACGAAAAAAGTCCAGCCTTCTGTTCCTGTTGGACTTCAGAAAAGGAAACTTGTGTGTCCCAGAGGCTGCGGTCAGTTCTTCTTCTTTAACCTCAGTCTTCAGAAACATTTAAAATACAAATGCAAAAAAAATGTTAAAGGTTTCAAAATGAGGAAGTATGCTCGATTTAAATGTGCATACTGCGAGAATAGTTTTGTTCATCGTACGAGCGCTCTGCGGCATATTAGGACTCATCATTACGGTAAGAAGAAGTGTGTGATTGATACTTATGAGGAGGAAATTGTACCCGAGAGTGCTTCAGCGAAAATGAATAGTCAATCGTATAATCAAGAGATAAAGACTCAAAACGAGATTCCAAAGACTCAGGGGAAAACCGAGAAACTGCCAAAAACTACACAACATCAAAATGATACCGAAGGTGCCTCAAACTTGCAGGAAGCTCCCAAGATGATTTATTGTCCTAACAATTGTGGAAGTAAATTTGAACATACATACAACATTTCTCGACATTTACGTATATCTTGCGTTAAAGTTCGTCGTTTCCAATGTCCACAATGCCATTATCGTTCTCATCAATTCAAACTGATTGGAAAGCACATCAAGACGATTCATCGACTGAGCAAGATTTACGCTCTTGATGTTTTCACGAAGCAGCCTATTTATTCTGAACCTACACGTCGTCCTCGATCCAGTTTTCAGATAATTAAAAGGACTACGAGGGAATCTGGCATTCCAGCGGAACCACAAGTTAAAGAGAAAATGAATTCAGCAGTTCTCAAACAGAAACGCTTTATTTCGAAGAAACAATTACTTAAAGAAACAGGCAAGAAGCCAAGGAAAGAAAAAAAAACTGAAGAGCTGTCGATTGCAACTGGATCAAATAAGATGGTTGGTCAAAGTGTAAATAATAAAGAAATCTCTAGAACTGCCTATCAGTCTCACTTTTTGGGTGTGAAAAAGGCCTCGAAAAAGAAGGGCTCGAAGGTCTTGAAATATAATAAGCGAAGATTGGAATGTCCTCACAAATGTGGACGTACTTTCATATCCTCTCAAAGGTTAAAAGTACACGCAAGATCAAACTGCAAAAGCGCTCCTTCTTTGAAGTGTCCACACTGTGACGTAATTTGTACATATTCTTGGAACGTTGCTATGCACATTAAATACCGTCATCCTGAATATTTGAGTGGTAGTAAAAAGCAAGAGGTCGAGGTTGCAGGAAATCATAAAAACAATACAAATTTTAAGCATGCAAATGGAACCGGAGAAGAATTGATGAATTTCACTGAAGAAATTGCAAATGAATCAAAAGGAGTAGAATCACCAGGACGAAGTAGCAATGCTGAAGTTAACAATGATATCGAAGAGGATGTGGAGATGGAAGAAAGTGTAACCGAAAATGTTGCTATTGACAGTGCTAGCAAGGTAAAAGATGCGGAGAATATTGAAAATGCTGAGGTTCAAGATGACGAAGATGATGATATTGAATTTGAGCTTGACGATGAAAATGAGAATGAAAACGAGATGGTACAAGAGACATCATATGGAGGAGATTTAAATTCAACTGCCAACATTTCCCGAAATACGAGCAACTTGAGTAATTCAATTTCGCCGAAAAGATTTGCCTGTCCTAATAATTGTGGAAGTTCTTATTCGAATCGCAACAGTTTGAAGACACACTTGCGTTACGCATGTGGTCAAAAGCCACGTTTTCGCTGTCCGTGGTGCGATCATTGCTCGAAACAAACTTCAAATGGTTATTCGCACGTGAAGAAGATGCACGAGGGTTGTCAAATTTATCTGATTGATATCGTCACTAATAAAATTATCTCTGGGTCGAGGTACCAACCAACCAAAGGTTCTCAACCAGAAGTTCTTGAAAATCAAATTGTTAGGCAGAATGATCTTGCTGAAAATAAAAATTCTATTGAAAACCAAGAAGTTGTTGGAATGGAGCAAGTCGAAGCTATAGGTGATGATTTAAACGATGAACCGGATGAGCCAGATGAACCTATTATAGGAACTGAGGAGGAATTTGGAACACCTGGTCCTGCAACAACACAAAAATCATCGCCAGAGAAGAACAAGTCTTTAATTTGTCCAAACAACTGTGGCAGTTCATTTAGTCATGAGCACAGCTTAACCAGACACCTTAGAGATCAATGTGGCCCTCCTCGTTATAAATGTCCTCATTGTTTCTACATCACGAGGGAACCTTCAAATGTCTACTTACACATTCAGAAGAAGCATCCAAACGAGAGAATTTACATGATCGATACTGACATGAACCAAAGCTGCGACGAACCTGGGTCCCCTCCTGGAGAAGATGAAAATTAA
Protein Sequence: MFVGEGDQAEVVWECINISDENIESIANRTDEILREGKLAQRKRKAARPAREPQIKYLTRSRFRVPEESTKNKSVLECPNKCGSSFFYQHTLDKHVRHICGKPLRYKCPHCDLTTRNRYSLTVHLKYRHPNLKDYVIDTFIGKPEPIFEDYDTSQEQHVQYSWNEEHEIKILNVSSLAKPEDIKQEFEDFKNESIVKSPSTNNKKFSCPNNCGNSYKHEYTLKAHLEFACHKNQTQNSFHLDEDESGSETYGMPMLTVSKIETPEELPNPMAFGESSVLKNEEGKWICPKKCGGTYSTRSNLNSHMRNYCRGNPDLETYNIRGSTPKVPEHDKIPLGKRQKTCKNCSKEFKLLHTLERHIAEGCGKPPRFKCPYCSYQVRRLSYAFFHITKNHPGLSVYMMDLLTGDHITDPSQIKKEVVEDIEEEKPAKKEKPLAPNPVHILRTKKVQPSVPVGLQKRKLVCPRGCGQFFFFNLSLQKHLKYKCKKNVKGFKMRKYARFKCAYCENSFVHRTSALRHIRTHHYGKKKCVIDTYEEEIVPESASAKMNSQSYNQEIKTQNEIPKTQGKTEKLPKTTQHQNDTEGASNLQEAPKMIYCPNNCGSKFEHTYNISRHLRISCVKVRRFQCPQCHYRSHQFKLIGKHIKTIHRLSKIYALDVFTKQPIYSEPTRRPRSSFQIIKRTTRESGIPAEPQVKEKMNSAVLKQKRFISKKQLLKETGKKPRKEKKTEELSIATGSNKMVGQSVNNKEISRTAYQSHFLGVKKASKKKGSKVLKYNKRRLECPHKCGRTFISSQRLKVHARSNCKSAPSLKCPHCDVICTYSWNVAMHIKYRHPEYLSGSKKQEVEVAGNHKNNTNFKHANGTGEELMNFTEEIANESKGVESPGRSSNAEVNNDIEEDVEMEESVTENVAIDSASKVKDAENIENAEVQDDEDDDIEFELDDENENENEMVQETSYGGDLNSTANISRNTSNLSNSISPKRFACPNNCGSSYSNRNSLKTHLRYACGQKPRFRCPWCDHCSKQTSNGYSHVKKMHEGCQIYLIDIVTNKIISGSRYQPTKGSQPEVLENQIVRQNDLAENKNSIENQEVVGMEQVEAIGDDLNDEPDEPDEPIIGTEEEFGTPGPATTQKSSPEKNKSLICPNNCGSSFSHEHSLTRHLRDQCGPPRYKCPHCFYITREPSNVYLHIQKKHPNERIYMIDTDMNQSCDEPGSPPGEDEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01394644;
90% Identity: iTF_01390611; iTF_01394644; iTF_01392286;
80% Identity: -