Sgif012025.1
Basic Information
- Insect
- Synergus gifuensis
- Gene Symbol
- nfxl1
- Assembly
- GCA_904066015.1
- Location
- CAJFCO010000047.1:720984-724774[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.76 2.4e+04 -3.7 0.8 15 19 124 128 123 128 0.80 2 19 0.072 2.3e+03 -0.5 0.8 4 10 159 165 158 165 0.95 3 19 3.3e-08 0.0011 19.8 17.3 1 19 173 190 173 190 0.99 4 19 0.00012 3.8 8.4 16.5 3 19 228 244 216 244 0.83 5 19 0.16 5.2e+03 -1.6 12.1 1 19 279 298 273 298 0.84 6 19 2.3e-05 0.72 10.7 10.1 1 18 334 351 334 352 0.97 7 19 0.018 5.8e+02 1.4 11.8 1 12 386 397 386 397 0.94 8 19 0.61 1.9e+04 -3.4 1.7 6 10 407 411 407 411 0.97 9 19 6e-08 0.0019 19.0 13.5 1 19 417 435 417 435 0.92 10 19 0.2 6.4e+03 -1.9 1.0 5 10 463 468 463 468 0.95 11 19 0.00025 7.9 7.4 7.4 9 19 483 493 481 493 0.90 12 19 0.00026 8.1 7.4 8.0 1 12 503 513 503 513 0.95 13 19 0.17 5.3e+03 -1.6 2.9 14 18 546 550 546 551 0.84 14 19 0.8 2.5e+04 -3.8 0.6 9 12 568 571 568 571 0.77 15 19 9.6e-05 3 8.7 6.4 1 12 587 598 581 598 0.91 16 19 0.39 1.2e+04 -2.8 1.7 6 10 614 618 613 618 0.88 17 19 0.0011 35 5.3 12.5 3 18 627 642 626 643 0.92 18 19 0.00012 3.9 8.4 13.4 1 16 688 702 678 708 0.86 19 19 0.49 1.6e+04 -3.1 1.1 6 10 738 742 737 742 0.89
Sequence Information
- Coding Sequence
- ATGAGGAAATTTAAACGAGCTCAGGCGGAGAATCAAGCAGCGATTGAAAAACATTTGGTGGCAAACGACTTACTGGATTCTTCCAGTGAAGAGGAAGAAAATGGGAATGTTTTAGAAGAAGCTGTAGATAAAGTTTTATCACTATACCAGATCGAAGGTGGTGATACAGAAAAGACACTTTCGTATCTAAGCGACGTTTTGCAATCCGGAGGAGCAATTTGCCTAATTTGTATTTCGTCTGTGAAGAAAACAGACGCGATATGGAACTGCGCTAAGTGTTTTACTTTCATGCATTTACCTTGCATACAACATTGGATTCGTGACAGTTTAAGTTACAAACGAGAAAAAGGAATCACTCCCCAGTGGGCATGTCCAATGTGCCGAACTGATTACCAAGAGGACGAGGTGCCAACGAAATATTTCTGCTTCTGTGGATCTACCATCGACCCAGTCTATCAACCCTGGTCGATTCCTCACTCCTGTGGCGAAACTTGTGGAAAATTACTTCAACCAAATTGTGGACACAAATGCGTTCTCCTCTGTCATCCAGGACCTTGTCCTCCCTGCCCTAAAACCGTCTCCACAAAATGCTTCTGTGGTAAACAATCAGCTCGTCCTCGTCGTTGCAACGCCAAAGAATGGAGTTGCGGAAGCATCTGTGGAAAAAACTACAAAACCTGCAACCACAGTTGCAAGGAAGAATGCCACAAAGAAGAGTGTCCTCCATGTACCGAAATTGTGCTCGCTTCCTGCAACTGTAAATCCAAAAGCGAACCTCGACCTTGTAATGAATCCAACTGGCTTTGCGACAAACCCTGTGGTCGTAAATTTCCTTGTAATATTCACATCTGCGAAGGTCTTTGCCACAAACCTGAAGACTGTAAGGGGTGTCCCATAGAAAAAAACAGGACATGTCCCTGTGGAAAGAAGAAATACGCCGTTTCCTGTAAACAGGTACATGTTCCCACTTGTGGCGATACCTGTGGCAAACTTTTAGACTGTGGTCGTCATTATTGCAACATGAGATGCCACACAGAAAAATGTGGACAGTGTCTAGAAATGGTGATCAAAACCTGTCGATGTGAAAATTTTCAGAAAGAGATTGCTTGTACAAAGGAATTCCACTGTAATAGAAAATGCACTCAGTGGAGACTTTGTGGAAGACATCATTGTAATAAAAAATGTTGCGACTGCTTGATTAAAAATACATTCAACGTCTGCGAGAAAGTTTGCGACAACCAGCTTAACTGCCAAAAACACAAGTGTGCTGCTCCTTGCCATAGCGGACCTTGTTATCCTTGCACTCGAAGTGATGTGATTCAGTGTAGATGTGGAAGTAGTAAGATCACAGTTCCTTGTGGATCTGTCAAAAGAATCAAGCCTCCAACTTGCAACAAGCTTTGCAAGATTCCACCAGTTTGTCATCACCCGAAACGAGAATCACATAAATGTCACCAGGGTTATTGTCCACCTTGCAAGAAAATTTGTGGATTGGTTCATAAGAAATGTGGACACACTTGTCCTGCAACTTGTCATACAAAGGTTTGGATGAAGGTGAAGATTAATGGAGTTAATTCGCAGCCAACTGCACCTTGGGATAATAATAGAAAGGAGCAGTGGAAGCAAAAAACACTTGCTTGTCCTCCTTGTGAGATTTCGGTTATGGTAACATGTTTAGGAGGACACGAGACTCTACCCTGGCCTTGTCATAAGGCGATTTCAAGTTCCTGTTTGAGGGAATGTGGCAGATTATTAACTTGTACGAATCATTATTGTGAGAAGCTTTGTCATAAAGTTGACTTAGGGGAAGACGGAAGTGAAGAGGATAGGTGTATGGAATGTGAGAAGCCTTGTGCTTTTCCTAGACCCGAAGGATGTACACATCCTTGTCTTAAGGCATGTCATCCAGCTCCTTGTGCTCCTTGTATGCAGCTTGTTAGAGTTGGATGCCATTGTGGAATTAATTTTTTGTATAAAAGGTGTTCTGAACTTACTTCTGCGACGGAGGACCAAAAGGAGGAAATGCTGAGATGTGGAAACCAGTGTCCGAAAAATTATCCATGTAGTCATCGGTGTGTGGACATTTGTCATCCAGGTCCCTGTTTAAAGTTTGAGTCTTGCAACAAGAAAGTTAAGGTTTGGTGTAAATGTAAGCGACTTAAAAAGGATTTCTCCTGTATTCAAATTCGCAAGGGTCAAGGCCTCGTTCAATGCGACGAAGTTTGTCGTCAGAAAAAGGAGGAATTAGAACGAGCTCGCGAGATCGAAATAGCAAAGAAAAATAAGGAAGAGGAACTTCGTAATCAAAGGGAGATAGAAATGTTTGAAAAGAAATTCAAACCTCGTCGAAAAATGAAAGATAGATCGCACCATAACGATAAATCGAAATCCGGTTCGAAAAACTGGATAAAATATTCACTATTTGCTATTATTTTGTCGATTGCAGCTTTTGCAATAACATATCACAATATCCACGTTTGA
- Protein Sequence
- MRKFKRAQAENQAAIEKHLVANDLLDSSSEEEENGNVLEEAVDKVLSLYQIEGGDTEKTLSYLSDVLQSGGAICLICISSVKKTDAIWNCAKCFTFMHLPCIQHWIRDSLSYKREKGITPQWACPMCRTDYQEDEVPTKYFCFCGSTIDPVYQPWSIPHSCGETCGKLLQPNCGHKCVLLCHPGPCPPCPKTVSTKCFCGKQSARPRRCNAKEWSCGSICGKNYKTCNHSCKEECHKEECPPCTEIVLASCNCKSKSEPRPCNESNWLCDKPCGRKFPCNIHICEGLCHKPEDCKGCPIEKNRTCPCGKKKYAVSCKQVHVPTCGDTCGKLLDCGRHYCNMRCHTEKCGQCLEMVIKTCRCENFQKEIACTKEFHCNRKCTQWRLCGRHHCNKKCCDCLIKNTFNVCEKVCDNQLNCQKHKCAAPCHSGPCYPCTRSDVIQCRCGSSKITVPCGSVKRIKPPTCNKLCKIPPVCHHPKRESHKCHQGYCPPCKKICGLVHKKCGHTCPATCHTKVWMKVKINGVNSQPTAPWDNNRKEQWKQKTLACPPCEISVMVTCLGGHETLPWPCHKAISSSCLRECGRLLTCTNHYCEKLCHKVDLGEDGSEEDRCMECEKPCAFPRPEGCTHPCLKACHPAPCAPCMQLVRVGCHCGINFLYKRCSELTSATEDQKEEMLRCGNQCPKNYPCSHRCVDICHPGPCLKFESCNKKVKVWCKCKRLKKDFSCIQIRKGQGLVQCDEVCRQKKEELERAREIEIAKKNKEEELRNQREIEMFEKKFKPRRKMKDRSHHNDKSKSGSKNWIKYSLFAIILSIAAFAITYHNIHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980613;
- 90% Identity
- iTF_01393964; iTF_01389873; iTF_01391636; iTF_01393174; iTF_01394807; iTF_01392448;
- 80% Identity
- -