Slae003883.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Synergus laeviventris
Gene Symbol
nfxl1
Assembly
GCA_032275145.1
Location
JAUESI010000007.1:7980065-7982956[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.53 1.6e+04 -3.2 1.1 15 19 124 128 123 128 0.81
2 19 0.072 2.2e+03 -0.5 0.8 4 10 159 165 158 165 0.95
3 19 3.3e-08 0.001 19.8 17.3 1 19 173 190 173 190 0.99
4 19 0.00013 4 8.3 16.5 3 19 228 244 216 244 0.83
5 19 0.0014 43 5.0 13.4 1 19 279 298 273 298 0.90
6 19 2.3e-05 0.68 10.7 10.1 1 18 334 351 334 352 0.97
7 19 0.018 5.5e+02 1.4 11.8 1 12 386 397 386 397 0.94
8 19 0.35 1.1e+04 -2.7 1.2 6 10 407 411 406 411 0.95
9 19 6e-08 0.0018 19.0 13.5 1 19 417 435 417 435 0.92
10 19 0.2 6.1e+03 -1.9 1.0 5 10 463 468 463 468 0.95
11 19 5.7e-05 1.7 9.5 7.0 9 19 483 493 481 493 0.90
12 19 0.019 5.7e+02 1.4 9.5 3 12 504 513 496 513 0.80
13 19 0.43 1.3e+04 -2.9 5.8 14 18 546 550 546 551 0.89
14 19 0.8 2.4e+04 -3.8 0.6 9 12 568 571 568 571 0.77
15 19 9.6e-05 2.9 8.7 6.4 1 12 587 598 581 598 0.91
16 19 0.39 1.2e+04 -2.8 1.7 6 10 614 618 613 618 0.88
17 19 0.02 6.1e+02 1.3 11.8 3 19 627 643 626 643 0.90
18 19 2.6e-07 0.0077 17.0 9.8 1 16 688 702 688 708 0.86
19 19 0.46 1.4e+04 -3.0 0.9 6 10 738 742 737 742 0.89

Sequence Information

Coding Sequence
atgaggaaatttaaaCGAGCTCAGGCGGAGAATCAAGCGGCGATTGAAAAACATTTGGTGGCAAATGATTTACTGGATTCTTCCAGtgaagaggaagaaaatggaaatgtTTTAGAGGAAGCTGTAGACAAAGTTTTGTCACTATACCAGGTCGAAGGTGGTGATACGGAAAAAACCCTTTCTTATCTAAGCGACGTTTTACAGTCCGGAGGAGCAATTTGCTTGATTTGTATTTCGTCTGTGAAGAAAACGGACGCGatATGGAACTGCGTTAAGTGTTTTACTTTTATGCATTTACCTTGCATACAACATTGGATTCGTGACAGTTTAAGTTACAAACGAGAAAAAGGAATCACTCCCCAGTGGGCATGTCCTAAGTGCCGATATGATTACCAAGAGATCGAGGTACCAACGAAATATTTCTGCTTCTGTGGAAATACCATCGACCCAATCTACCAACCCTGGTCGATTCCACACTCCTGTGGTGAGACTTGTGGAAAATTACTTCAACCAAATTGCGGACACAAATGCGTTCTCCTCTGTCATCCAGGACCCTGTCCTCCCTGCCCAAAAACCGTTTCCACAAAATGCTTCTGTGGTAAACAACCAGCTCGACCGCGCCGTTGCAACATCAAAGAATGGAGTTGCGGAAGCATCTGTggaaaaaactacaaaacctgCAACCACAGTTGCAAGGAAGAATGCCACAAAAAAGAGTGTCCTCCATGTTCCGAAATTGTGCTCGCTTCTTGCAACTGTAAATCCAAAAGTGAACCTCGACCTTGCAATGAATCCAACTGGATTTGCGACAAACCCTGTGGTCGTAAATTTCCATGTAATATTCACATTTGCGAAGGACTTTGCCACAAACCTGGAGACTGCAAGGGTTGTCCCATAGAAAAAAACAGGACATGTCCCTgtggaaaaaagaaatacgcCGTTTCTTGTAAACAGGTACATGTTCCCACTTGTGGCGATACTTGTGGCAAACTTTTAGACTGTGGTCGTCATTATTGCAACATGAGATGCCACACAGAGAAATGTGGACAGTGTCTAGAAATGGTGATTAAAACCTGTCGATGTGGAAGTTTTCAGAAAGAAATTGCTTGCACGAAGGAGTTCCACTGTAATAGGAAATGCACCCAGTGGAGACTTTGTGGAAGACAtcactgtaataaaaaatgttgcgaCTGCTTGATTAAAAATACGCACAACGTCTGCGAGAAAGTTTGCGACAACCAGCTCAACTGCCAGAAGCACAAGTGTGCTGCGCCTTGCCACAGCGGACCTTGTTATCCTTGTACTCGAAGCGATGTGATTCAATGTAGATGTGGAAGTAGTAAAATCACAGTTCCTTGTGGATCTGCCAAGAGAATCAAGCCTCCTACTTGCAACAAGCTTTGCAAGATTCCACCAGTTTGTCATCATCCAAAACGAGAATCACATAAATGTCACAAGGGTTACTGTCCaccttgtaagaaaatttgtGGACTGGTCCATAAGAAATGTGAACACACTTGTCCTGCGACTTGTCATACAAAGGTTTGGATGAAGGTTAAGATTAATGAAGTTCACTCTAAGCCAACTGCACCTTGGGATAATAATAGAAAGGAGCAGTGGAAACAGAAGACACTTCCTTGTCCTCCTTGTGAAATTTCGGTTATGGTAACGTGTTTAGGAGGACACGAGACTCTACCCTGGCCTTGTCATAAGGCGGTTTCAAATTCCTGTCTGAGGAAATGTGGCAGATTACTGACTTGTACAAATCACTATTGTGAGAAACTTTGTCATAAAGTTGATTTGGGAGAAGACGGAAGTGAACAGGACAGGTGTATGGAATGTGAGAAGCCTTGTGCTTTTCCTAGACCCGAAGGATGTACTCATCCTTGTCTTAAGGCATGTCATCCAGCTCCTTGTGCTCTTTGTAAGCAGCTTGTGAGAGTTAGATGCCATTGTGGAATTAATTTCTTGTATAAAAGGTGTGCTGAGCTCACTTCTGCGACGGAGGACCAAAAGAAGGAAATGCTGAAATGTGGAAACCAGTgtccaaaaaatTATCCCTGTGGTCATCGGTGTGTGGAAATTTGCCATCCAGGTCCCTGTTTAAAGTTTGAGTCTTGCAACAAGAAAGTCAAAGTTTGGTGTAGATGTAAGCGCTTTAAAAAGGATTTCTCCTGTATTCAAATCCGCAAGGGTCAAGGCCTCGTTGAATGTGACGAAGTTTGCCGCCAGAAAAAGGAGGAATTAGTACGAGCTTGCAAGATCGAAATAGcgaagaaaaataaggaagagGAACTCCGTAATCAAAGGGAAAtagaaatgtttgaaaagaaattcaagcctcgtcgaaaaatgaaagataGGTCGCACAATAGTGATAAATCGAAATCCGGTTCGAAAAACTGGATAAAATATTCACTATTTGCTCTTATTTTGGCGATTGCAGCTTTTGCAATAACTTATCTTAATACCCATGTTTGA
Protein Sequence
MRKFKRAQAENQAAIEKHLVANDLLDSSSEEEENGNVLEEAVDKVLSLYQVEGGDTEKTLSYLSDVLQSGGAICLICISSVKKTDAIWNCVKCFTFMHLPCIQHWIRDSLSYKREKGITPQWACPKCRYDYQEIEVPTKYFCFCGNTIDPIYQPWSIPHSCGETCGKLLQPNCGHKCVLLCHPGPCPPCPKTVSTKCFCGKQPARPRRCNIKEWSCGSICGKNYKTCNHSCKEECHKKECPPCSEIVLASCNCKSKSEPRPCNESNWICDKPCGRKFPCNIHICEGLCHKPGDCKGCPIEKNRTCPCGKKKYAVSCKQVHVPTCGDTCGKLLDCGRHYCNMRCHTEKCGQCLEMVIKTCRCGSFQKEIACTKEFHCNRKCTQWRLCGRHHCNKKCCDCLIKNTHNVCEKVCDNQLNCQKHKCAAPCHSGPCYPCTRSDVIQCRCGSSKITVPCGSAKRIKPPTCNKLCKIPPVCHHPKRESHKCHKGYCPPCKKICGLVHKKCEHTCPATCHTKVWMKVKINEVHSKPTAPWDNNRKEQWKQKTLPCPPCEISVMVTCLGGHETLPWPCHKAVSNSCLRKCGRLLTCTNHYCEKLCHKVDLGEDGSEQDRCMECEKPCAFPRPEGCTHPCLKACHPAPCALCKQLVRVRCHCGINFLYKRCAELTSATEDQKKEMLKCGNQCPKNYPCGHRCVEICHPGPCLKFESCNKKVKVWCRCKRFKKDFSCIQIRKGQGLVECDEVCRQKKEELVRACKIEIAKKNKEEELRNQREIEMFEKKFKPRRKMKDRSHNSDKSKSGSKNWIKYSLFALILAIAAFAITYLNTHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00980613;
90% Identity
iTF_01390764;
80% Identity
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