Scon003673.1
Basic Information
- Insect
- Synergus coniferae
- Gene Symbol
- nfxl1
- Assembly
- GCA_032164275.1
- Location
- JAUEJJ010000013.1:8267288-8270235[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.53 1.5e+04 -3.2 1.1 15 19 124 128 123 128 0.81 2 19 0.072 2e+03 -0.5 0.8 4 10 159 165 158 165 0.95 3 19 3.3e-08 0.00093 19.8 17.3 1 19 173 190 173 190 0.99 4 19 0.0002 5.7 7.7 16.5 3 19 228 244 216 244 0.83 5 19 0.0014 40 5.0 13.4 1 19 279 298 273 298 0.90 6 19 0.0002 5.6 7.7 8.9 1 18 334 351 334 352 0.96 7 19 0.018 5.1e+02 1.4 11.8 1 12 386 397 386 397 0.94 8 19 0.23 6.5e+03 -2.1 1.0 6 10 407 411 406 411 0.92 9 19 6e-08 0.0017 19.0 13.5 1 19 417 435 417 435 0.92 10 19 0.2 5.7e+03 -1.9 1.0 5 10 463 468 463 468 0.95 11 19 0.00025 7 7.4 7.4 9 19 483 493 481 493 0.90 12 19 0.00026 7.2 7.4 8.0 1 12 503 513 503 513 0.95 13 19 0.43 1.2e+04 -2.9 5.8 14 18 546 550 546 551 0.89 14 19 0.8 2.2e+04 -3.8 0.6 9 12 568 571 568 571 0.77 15 19 7.8e-05 2.2 9.0 6.1 1 12 587 598 581 598 0.91 16 19 0.39 1.1e+04 -2.8 1.7 6 10 614 618 613 618 0.88 17 19 0.00064 18 6.1 12.8 3 19 627 643 626 643 0.94 18 19 2.7e-06 0.076 13.7 8.0 1 16 688 702 688 708 0.86 19 19 0.46 1.3e+04 -3.0 0.9 6 10 738 742 737 742 0.89
Sequence Information
- Coding Sequence
- atgaggaaatttaaACGAGCTCAGGCGGAAAATCAGGCAGCGATTGAAAAACATTTGGTGGCAAATGACTTACTGGATTCTTCTAgtgaagaggaagaaaatggaaatattttagaggAAGCTGTAGACAAAGTTTTGTCACTATATCAGGTCGAAGGTGGTGATACAAAAAAGACACTTTCGTATTTAAGCGACGTTTTGCAATCCGGAGGAGCAATTTGCCTAATTTGTATTTCGTCTGTGAAGAAAACGGACGCGatatggAACTGCGTTAAGTGTTTTACTTTTATGCATTTACCTTGCATACAACATTGGATTCGTGACAGTTTAAGTTACAAACGAGAAAAAGGAATCAATCCCCAGTGGGCATGtCCAAAGTGCCGGACTGATTACCAAGAGGACGAGGTACCAACGAAATATTTCTGCTTCTGTGGAAAAACCATCGACCCAATCTACCAACCTTGGTCCATTCCTCACTCCTGTGGCGAAACTTGTGGAAAATTACTTCAACCGAATTGCGGACACAAATGCGTTCTTCTCTGTCATCCAGGACCCTGTCCTCCGTGCCCTAAAACAGTCTCCACCAAATGCTTCTGTAGTAAACAACCAGCTTGCCCTCGTCGTTGTAACGCCAAAGAATGGAGTTGCGGAAGCATCTGTGGAAAAAGCTACAAAACCTGCAATCACAGTTGCAAGGAAGAATGCCACAAAGAAAAGTGTCCTCCATGTACCGAAATTGTGCTCGCTTCCTGCAACTGTAAATCGAAAAGCGAACCTCGACCTTGTAACGAATCCAACTGGCTTTGCGACAAACCCTGTGGTCGTAAATTTCCTTGTAATATTCACATCTGTGAAGGTCTTTGCCACAAACCTGGAGACTGCAAGGGATGTCCCATAGAAAAAAACAGGACATGTCCCTgtggaaagaagaaatatgcCGTTTCTTGTAAACAGGTACATGTTCCCACTTGTGGTGATACCTGTGGCAAACTTTTAGACTGCAGTCGTCATTATTGCAATATGAGATGCCACACAGAAAAATGTGGACAGTGTCTGGAAATGGTGGTCAAAACCTGTCGATGTGGAAGTTTCCAGAAAGAGATTGCTTGTACGAAAGAGTTTCACTGTAATAAGAAATGCACCCAGTGGAGGCTTTGTGGAAGACATCATTGTAATAAAAAGTGTTGTGACTGCTTGATTAAAAATACGTTCAACGCCTGCGAGAAAGTTTGCGACAACCAGCTTAACTGCCAGAAACATAAGTGTGCTGCCCCTTGCCATAGCGGACCTTGTTATCCTTGCACTCGAAACGATGTGATTCAGTGTAGATGTGGAAGTAGTAAAATCACAGTTCCTTGTGGATCTGTCAAGAGAATCAAGCCTCCAACTTGCAACAAACTTTGCAAGATTCCACCAGTTTGTCATCATCCGAAACGAGAATCACATAAATGTCATCAGGGTTATTGTCCACCTTGCAAGAAAATTTGTGGATTggttcataaaaaatgtggaCACACTTGTCCTGCAACTTGTCATACAAAGGTTTGGATGAAGGTCAAGATTAATGGAGTTAATTCCCAGCCAACTGCACCTTGGGATAATAATAGAAAGGAGCAGTGGAAGCAGAAAACACTTCCTTGTCCTCCTTGTGAGGTTTCAGTTATGGTAACATGTTTAGGAGGACACGAGACTCTACCCTGGCCTTGTCATAAGGCGGTTTCAAGTTCCTGTTTGAGGGAATGTGGTAGATTATTGAGTTGTACGAATCACTATTGTGAGAAGCTTTGTCATAAAGTTGACTTGGGAGAAGACGGAAGTGAAGAAGACAGGTGTATGGAATGTGAGAAGCCTTGTGCTTTTCCTAGACCTGAAGGATGTATTCATCCTTGTCTTAAGGCATGTCATCCAGCTCCTTGTGCTCCTTGTAAACAGCTTGTGAGAGTTGGATGCCATTGTGGAATTAATTTCTTGTATAAAAGGTGTGCTGAACTCACTTCTGCGACGGAGGAACAAAAGGAGGAAATGCTGAGATGTGGAAACCAGTGTCCGAAAAATTATCCCTGTGGTCATCGGTGTGTGGACATTTGTCATCCAGGTCTCTGTTTAAAGTTTGAGTCTTGCAACAAGAAAGTCAAGATTTGGTGTAAATGTAAGCGACTTAAAAAGGATTTCTCCTGTATTCAAATTCGTAAAGGTGAAGGCCTCGTTGAATGCGACGAAGTTTGCCGCCAGAAAAAGGAGGAATTAGAACGAGCTCGCGAGATGGAAATAGcgaagaaaaataaggaagaGGAGCTTCGAAATCAAAGGGAAAtagaaatgtttgaaaagaaattcaaacctcgtcgaaaaatgaaagataGGTCACACAATAGCGACAAATCGAAATCCGGTTCGAAAAACTGGATAAAATATTCGCTATTTGCTATTATTTTGGCAATTGCAGCTTTTGCAATAACATATCTCAATACCCATGTTTGA
- Protein Sequence
- MRKFKRAQAENQAAIEKHLVANDLLDSSSEEEENGNILEEAVDKVLSLYQVEGGDTKKTLSYLSDVLQSGGAICLICISSVKKTDAIWNCVKCFTFMHLPCIQHWIRDSLSYKREKGINPQWACPKCRTDYQEDEVPTKYFCFCGKTIDPIYQPWSIPHSCGETCGKLLQPNCGHKCVLLCHPGPCPPCPKTVSTKCFCSKQPACPRRCNAKEWSCGSICGKSYKTCNHSCKEECHKEKCPPCTEIVLASCNCKSKSEPRPCNESNWLCDKPCGRKFPCNIHICEGLCHKPGDCKGCPIEKNRTCPCGKKKYAVSCKQVHVPTCGDTCGKLLDCSRHYCNMRCHTEKCGQCLEMVVKTCRCGSFQKEIACTKEFHCNKKCTQWRLCGRHHCNKKCCDCLIKNTFNACEKVCDNQLNCQKHKCAAPCHSGPCYPCTRNDVIQCRCGSSKITVPCGSVKRIKPPTCNKLCKIPPVCHHPKRESHKCHQGYCPPCKKICGLVHKKCGHTCPATCHTKVWMKVKINGVNSQPTAPWDNNRKEQWKQKTLPCPPCEVSVMVTCLGGHETLPWPCHKAVSSSCLRECGRLLSCTNHYCEKLCHKVDLGEDGSEEDRCMECEKPCAFPRPEGCIHPCLKACHPAPCAPCKQLVRVGCHCGINFLYKRCAELTSATEEQKEEMLRCGNQCPKNYPCGHRCVDICHPGLCLKFESCNKKVKIWCKCKRLKKDFSCIQIRKGEGLVECDEVCRQKKEELERAREMEIAKKNKEEELRNQREIEMFEKKFKPRRKMKDRSHNSDKSKSGSKNWIKYSLFAIILAIAAFAITYLNTHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980613;
- 90% Identity
- iTF_01390764;
- 80% Identity
- -