Basic Information

Insect: Synanthedon formicaeformis
Gene Symbol: -
Assembly: GCA_945859765.1
Location: CAMAON010000087.1:606096-613277[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 5.2e-05 0.003 18.2 2.9 1 23 193 215 193 215 0.97

2 27 0.0011 0.065 14.0 0.7 2 20 247 265 246 267 0.93

3 27 0.0002 0.012 16.3 0.7 1 23 292 315 292 315 0.96

4 27 0.0085 0.48 11.2 3.8 1 23 364 387 364 387 0.97

5 27 0.002 0.11 13.2 0.2 1 23 404 426 404 426 0.95

6 27 0.00036 0.02 15.5 0.9 3 23 462 483 460 483 0.91

7 27 0.011 0.6 10.9 2.7 2 23 520 542 520 542 0.96

8 27 0.00037 0.021 15.5 0.8 1 23 592 615 592 615 0.97

9 27 0.0014 0.08 13.7 0.3 1 23 675 697 675 697 0.98

10 27 0.0013 0.072 13.8 4.0 2 23 709 730 708 730 0.96

11 27 0.072 4.1 8.3 1.8 2 23 742 763 741 763 0.96

12 27 0.0012 0.07 13.8 0.3 1 23 773 795 773 795 0.98

13 27 0.0034 0.19 12.5 1.6 2 23 829 850 828 850 0.95

14 27 0.016 0.93 10.3 5.4 1 23 861 883 861 883 0.98

15 27 0.00023 0.013 16.1 0.2 1 23 891 913 891 913 0.98

16 27 0.0033 0.19 12.5 0.1 2 23 933 955 932 955 0.97

17 27 0.64 36 5.3 0.7 1 23 973 995 973 995 0.96

18 27 0.025 1.4 9.7 2.1 3 23 1036 1057 1034 1057 0.94

19 27 0.00088 0.05 14.3 0.5 1 23 1079 1101 1079 1101 0.97

20 27 0.48 27 5.7 0.5 2 20 1105 1123 1104 1124 0.89

21 27 8.5 4.8e+02 1.8 2.5 2 23 1144 1166 1143 1166 0.82

22 27 0.0055 0.31 11.8 0.6 1 23 1181 1203 1181 1203 0.96

23 27 0.0019 0.11 13.2 1.3 2 23 1242 1264 1241 1264 0.96

24 27 3 1.7e+02 3.2 5.2 2 23 1281 1299 1281 1299 0.90

25 27 0.4 23 5.9 1.4 2 21 1303 1322 1303 1323 0.93

26 27 0.12 6.6 7.6 0.4 2 23 1371 1392 1370 1392 0.95

27 27 0.0013 0.073 13.8 0.4 2 23 1403 1425 1402 1425 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	5.2e-05	0.003	18.2	2.9	1	23	193	215	193	215	0.97
2	27	0.0011	0.065	14.0	0.7	2	20	247	265	246	267	0.93
3	27	0.0002	0.012	16.3	0.7	1	23	292	315	292	315	0.96
4	27	0.0085	0.48	11.2	3.8	1	23	364	387	364	387	0.97
5	27	0.002	0.11	13.2	0.2	1	23	404	426	404	426	0.95
6	27	0.00036	0.02	15.5	0.9	3	23	462	483	460	483	0.91
7	27	0.011	0.6	10.9	2.7	2	23	520	542	520	542	0.96
8	27	0.00037	0.021	15.5	0.8	1	23	592	615	592	615	0.97
9	27	0.0014	0.08	13.7	0.3	1	23	675	697	675	697	0.98
10	27	0.0013	0.072	13.8	4.0	2	23	709	730	708	730	0.96
11	27	0.072	4.1	8.3	1.8	2	23	742	763	741	763	0.96
12	27	0.0012	0.07	13.8	0.3	1	23	773	795	773	795	0.98
13	27	0.0034	0.19	12.5	1.6	2	23	829	850	828	850	0.95
14	27	0.016	0.93	10.3	5.4	1	23	861	883	861	883	0.98
15	27	0.00023	0.013	16.1	0.2	1	23	891	913	891	913	0.98
16	27	0.0033	0.19	12.5	0.1	2	23	933	955	932	955	0.97
17	27	0.64	36	5.3	0.7	1	23	973	995	973	995	0.96
18	27	0.025	1.4	9.7	2.1	3	23	1036	1057	1034	1057	0.94
19	27	0.00088	0.05	14.3	0.5	1	23	1079	1101	1079	1101	0.97
20	27	0.48	27	5.7	0.5	2	20	1105	1123	1104	1124	0.89
21	27	8.5	4.8e+02	1.8	2.5	2	23	1144	1166	1143	1166	0.82
22	27	0.0055	0.31	11.8	0.6	1	23	1181	1203	1181	1203	0.96
23	27	0.0019	0.11	13.2	1.3	2	23	1242	1264	1241	1264	0.96
24	27	3	1.7e+02	3.2	5.2	2	23	1281	1299	1281	1299	0.90
25	27	0.4	23	5.9	1.4	2	21	1303	1322	1303	1323	0.93
26	27	0.12	6.6	7.6	0.4	2	23	1371	1392	1370	1392	0.95
27	27	0.0013	0.073	13.8	0.4	2	23	1403	1425	1402	1425	0.96

Sequence Information

Coding Sequence: ATGGCCCTCAAACTAGGGAAATGCAGACTTTGTCTGAAACTTGGAGACTTTTACTCCATATTCACAACAGACAATGACATACAACTATCTGAAATGGTTATGGAATGCACCAGAGTTAAAATATTTGATGGCGATGGATTACCAGACAAGGTTTGTTCTGAATGCATTCAGAAGCTTAGCAGTGCATACATATTTAAACAACAGTGTGAGAGAGCAGACCTTGAGCTGCGAAGGAATTACGTACCTCCACCAGGTTTTACGCCACCACCACCAAACAGACAGAGCAGTGATTCCGCCTTTTCCAATCAAACGGATATTTCTTATCAGAATAAACCGTCATCTTCAACTGAAGGTAAAGTCTTTCCAGCTACGCGAAAACGCAGTCACGAGAGTATTGACAATGCGTCCTCCAGCAGTCAGTCGCACGACTACAATCCGACCAGCTCTTTGAAGAAGGTAAAAAAACCGAAACCGATTAGTCAGCCTCAATACAATTCTGACACAGATTTAGATGACAACAGTGCATTCGTGCTCTCCGCTGAAGAGGATTCGGACTCTCAGAGAAAGTCGGAAGGGTTCCCTTGTCCTGTTTGCGGCAAGTGTTTTGCAACAAAACACAGTATGGCCCAGCACTCGAAAAGTCATGCCCGCAAGAGTTTAACGAAGTTAGGTGAAAATGCTGTAGTTAACATACCGAAGAGTAATGTGGAAGATGCTAAGGATGTTGAAGATAAGCTTACGTGTGAAAAGTGCGGAAAAAATTTCAAATTAAAGATCATGCTGAAACGTCACTATGACAAATGTGAGAACACGTTGAAAACTCAAAAGGAATTGTTGATTTCGCTGGAGCCCGTCGACGCAGTGATCAACACGTTTCAATGTGAAATTTGCACGGCAAAATTTAAGACTGAAGACAAATTTCGAATACACATGAAAGCGATACATTCTATTAAAAGTGAAAAGTTGGAAGCGTCTGAAACGCCAACAGACGTATCGATGCCGTGTATTTTCTGCAAGGAACAGTTCAACGATTACTATTTGTACACATCACACTTCAACTCTTGCTCAAAGAGAATGGACATGGATGAATTTGAATGTCCCCTCTGTCAGAGAATGTTGTCGAGGCGGAACACATTCTTCACTCACATTAGGAACTGTCACTTTGAAACGAGACCGGCTAAACCTCAAGATAAAGGTGGCAGTGACAACTTTGCTTGTCGCATATGCAACAAGAAACTTAGCAATCAGAATCAGCTTATAGAACATCTCGCTGCACATATGTCAAACATGACTGGAGAATTAGATGAATCTGGggttagctcacaAAATGAGTCCAAAATATCAGACCAGATGGATACTCCCAATTCAGATTCACTGTTAGATTGTAGTTATTGTGGTAAACAGTTTAAGGGCAAGAAGTGGCTAATGAAACACCTCACTGCTAAACACAACGTCAGCCAACTCGACTTACCATCCGCAGCAGTCAATAAGAGTCTGCCCAAGGTGATATATAAGGATGACGAGTCTGATTCTAGTCACGACGAAACTGAAGACAATACGTGTGATATATGTGAGAAACAGTTCTCATACAGACGTACATTCCTGCAACATAAACGTCTAAAACACAATATGAGTTCGGGTCACAAGAGAGCTAAAATCACTTTGAAGGATTGCGAAGTCCGTTGTCTAATCTGTGACAAAGACATGAAAGTGAGCGACATAAGTGAACATAATCAGACACATATATCGGCAAACTTGAAACCGAGGAATCTTTACACTTGTGTCGAGTGCGGTGAGAAATTCCAGAGTTGTACTTCCTTAGCTACCCACATAAAAATTGTGCATAGACTGAAACAACCCGGCGCCATCCCGGACAAGGATGATTCTATTAATTTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGACGACAATGTCCAGAGTTACAACGACTCTACAATGGGTCCGTCTAAATCCGAAGCAACAACACCTTTAGTAGATCTGAATGGATTCACATGTCCGATTTGCAACAAAAAAATGGGCACCCTTATATCGCTTAAACGACACATAAACTGGCACTCGAATGTCGGCAATAATTTAGAGAAGGCAATGGAATGTTTCGTCTGCAAGGAGAAGTTCAAATTTAAGAGTCATTATCGGCTTCATATGCGAGGCCACTACACAGACACTAATCTGGATCCCAAACTTCTGACTTGCACGATCTGCAACAGACGCAGCAAACACCTGCGGGCTGCACAGGCCCACATGAACTTCCACAAGCAGACTCGTTTCAAGAACAAGGACTACGAGTGTTCCATTTGTGGTCGCGTGTTTCAATATAGACGCGTCTACCTCTCGCATATGGCCATACACTACAAACGAGGGGAGAGCGTCACAAACACTATAGTGGGCACTCCCAACGCCCAGGCTCAGGCCATTGCCGACGCCCAGGGCAACCCTGAAGGAAGCCTCGTCTGCAAACTCTGCGGCAAGGTCTGCGACTCCGAGGTCTCCCTCAAACATCACACAATCTGGCACAGCTCCAAGACTATGCTCTATGGAGCACGTCACGAATGCTCACTGTGTCACCTAGTATTCACAAACAAGAGACGACGGGAGTTGCACATGAGAACTCATTTTGAAGACGACAATGGTCCGTACAAATGTAACATTTGCGGCAAGGGCTACATAGAAGAGGGCTATTTTAATCGACACGTGAAGGGACACAACTTCGATCATCAATCGCATCAGAAACGCATTGAGAATTTGAGAAAGCACAAGGTGAAATGTCCGATATGCGCCAGATACTATCCGGACTTGGTGAAGCTTATTCGTCACCTGCGTCGAACTCATCCGCAGAGTAAGATGATAAAGGAGGATCCTGACGCACCGCCGCCGGTCTATTACTCGTGCCAATTGTGCGCCAAAGTGTTTCTGAACGAGCAGCGATTGAAAAATCACGAGGAGCGCCATCAGCGCAAACCCAAGTGGTACAAGTGTAAATTTTGCTCAATAAACTCGTTTTCGCTTAAAGGCCACAGGATTCACATAAAGGCTCACATGAATAAGAAATTCACGGACGATCCACTCGATTGTCCGCAGTGCGACGAGAAGTTCTATAAAGGTTATCATCTGCACTACCATTTGCGCGATGTCCACGGTATCTTGGAGACTTGGATCGATGAGGAGGCCGAAGAGAAGGTTTACGGTCCATTGCAAGAATTCCAGTGTTCCGTCTGTTTCAAAATACTAGCTAACAAGGGAAACTTCGAGCGGCATATAGACTACCATAACACCCTCCGTTGTAATTACTGCTTTGAGTATTTCACCACTCAGAAATTTCTGGATGGTCATTTGGTGTTTAGCTGTGAAAAACGGAAACTGATCGGAGATACGGAGGTGCATTTGAGGAAAATCAAATGTGACATATGCTATAAGGCATTCCACTTGCAAGTGAAGTTGGATTGCCACTTGCGCGCTCGTCACGACATAACAGTAAAGCGGGAAGCTTCCGAGGGAAAGAAGGAATTCGTTTGCGATTTTTGCTTTAGGGTTTTCGAGAATGAAGATTCACTTGTATCGCACAAATTGTACCACCGCACGGTCGGATTTTTTGGTTGCATATATTGCAATAGAAAATTCAACACAATAACGGTCTACAATAAACACAAAACTCACCATTTCTCCCAGCTGAATGTGGACGAGCCCAACAAGTGTGAGCACTGTGACAAAACATTTGTACCATTCCGGGATATGATATATCATATGAGGGACGAGCACGGCGATGATAAGGAATGGATTATAATGCCCAAGGAATCCATTGAAGAGAAATGCCATATTTGTAACAAGGTGTTCCTAAATCTGCATAGACATCTTGAATACCACGAGGAGAATAGATGCAAGAAGTGCGGCGAGTATTTCTTTTCGATGTCAGATTATGACAACCATCTCTGCGCGATCGAGAGCGACGATGAAGTGGGCAATTTGGAGTTGAGTTTGAAACCGGCGTACGAGGAGTGTCGCTTCTGTTTCAAGCCGATCACTAAGAAAGACTCCAAATTGAAGCACGATAAGATTCACAGAGGCTCAGGGGCGATATCGTGCCGGTTCTGTCCTCTGAAATTCAAAACCATAGACGCTTTCAACATACATGCTTTCACGCATCGAAGTCGCAAATACAAGAAGAAGCCGCTCAAATGTCGCGATTGCGGCGAGAAGTTTGTACAGTATGGACCGTTTATGAAACATCTGAAGTCTGTGCATAAGTTAACGCAAAAGATGCACTATCGAGCGACCGTGATTCCGGACAAGTGCATAGTGTGCGGCGATGATTTCCCCAACTTGCACAACCATTACAGGGCGCACTTGCAGAATCAGTGTCAGCAATGTCACAAATATTTCACTTCCCACAAGGTATTTAGTCATCATGAATGCGATAAGGAGGATTTGGATCCGTCGAAGGTGTTCGTTTGCAATGAAGACTTGAATGCACTTATCAAAACGTATGTTCCGAGAGACAGAGATGAGGCAGAACAAAGATATTATGGCTTCAACGAAGACGACGATGCTGCAGACGCCCAAGATAATACGAGCCAATATTCAGCCGAAAGCGAACCTCTAACACTTTTCGAACATCCCGTTATATCTGGAGTACAATCGCTTTTTAAATTGGAAATCGAGAAACTCAGCACAGATGATAGTCAGGATTGTAGTGATGTTCCCAATGGAGATGAAACTGTTGTTGAAAATAATGATAATAAAACTTTTGCGAAACAAAATGGCGACAAAGACAAGGATGATGACAGCGACTGTGATGTCATAGTATTAGATGAAGATTCAGTGGGATTTGACTGTACGTCTAACGTTATTACGATAGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTTDNDIQLSEMVMECTRVKIFDGDGLPDKVCSECIQKLSSAYIFKQQCERADLELRRNYVPPPGFTPPPPNRQSSDSAFSNQTDISYQNKPSSSTEGKVFPATRKRSHESIDNASSSSQSHDYNPTSSLKKVKKPKPISQPQYNSDTDLDDNSAFVLSAEEDSDSQRKSEGFPCPVCGKCFATKHSMAQHSKSHARKSLTKLGENAVVNIPKSNVEDAKDVEDKLTCEKCGKNFKLKIMLKRHYDKCENTLKTQKELLISLEPVDAVINTFQCEICTAKFKTEDKFRIHMKAIHSIKSEKLEASETPTDVSMPCIFCKEQFNDYYLYTSHFNSCSKRMDMDEFECPLCQRMLSRRNTFFTHIRNCHFETRPAKPQDKGGSDNFACRICNKKLSNQNQLIEHLAAHMSNMTGELDESGVSSQNESKISDQMDTPNSDSLLDCSYCGKQFKGKKWLMKHLTAKHNVSQLDLPSAAVNKSLPKVIYKDDESDSSHDETEDNTCDICEKQFSYRRTFLQHKRLKHNMSSGHKRAKITLKDCEVRCLICDKDMKVSDISEHNQTHISANLKPRNLYTCVECGEKFQSCTSLATHIKIVHRLKQPGAIPDKDDSINLADFCEVVVTKAEPLDDNVQSYNDSTMGPSKSEATTPLVDLNGFTCPICNKKMGTLISLKRHINWHSNVGNNLEKAMECFVCKEKFKFKSHYRLHMRGHYTDTNLDPKLLTCTICNRRSKHLRAAQAHMNFHKQTRFKNKDYECSICGRVFQYRRVYLSHMAIHYKRGESVTNTIVGTPNAQAQAIADAQGNPEGSLVCKLCGKVCDSEVSLKHHTIWHSSKTMLYGARHECSLCHLVFTNKRRRELHMRTHFEDDNGPYKCNICGKGYIEEGYFNRHVKGHNFDHQSHQKRIENLRKHKVKCPICARYYPDLVKLIRHLRRTHPQSKMIKEDPDAPPPVYYSCQLCAKVFLNEQRLKNHEERHQRKPKWYKCKFCSINSFSLKGHRIHIKAHMNKKFTDDPLDCPQCDEKFYKGYHLHYHLRDVHGILETWIDEEAEEKVYGPLQEFQCSVCFKILANKGNFERHIDYHNTLRCNYCFEYFTTQKFLDGHLVFSCEKRKLIGDTEVHLRKIKCDICYKAFHLQVKLDCHLRARHDITVKREASEGKKEFVCDFCFRVFENEDSLVSHKLYHRTVGFFGCIYCNRKFNTITVYNKHKTHHFSQLNVDEPNKCEHCDKTFVPFRDMIYHMRDEHGDDKEWIIMPKESIEEKCHICNKVFLNLHRHLEYHEENRCKKCGEYFFSMSDYDNHLCAIESDDEVGNLELSLKPAYEECRFCFKPITKKDSKLKHDKIHRGSGAISCRFCPLKFKTIDAFNIHAFTHRSRKYKKKPLKCRDCGEKFVQYGPFMKHLKSVHKLTQKMHYRATVIPDKCIVCGDDFPNLHNHYRAHLQNQCQQCHKYFTSHKVFSHHECDKEDLDPSKVFVCNEDLNALIKTYVPRDRDEAEQRYYGFNEDDDAADAQDNTSQYSAESEPLTLFEHPVISGVQSLFKLEIEKLSTDDSQDCSDVPNGDETVVENNDNKTFAKQNGDKDKDDDSDCDVIVLDEDSVGFDCTSNVITID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01387813; iTF_01386057; iTF_01388758;
90% Identity: iTF_01387813; iTF_01386057; iTF_01388758;
80% Identity: -