Sand000186.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Synanthedon andrenaeformis
Gene Symbol
-
Assembly
GCA_936447275.2
Location
CAKZFQ020000009.1:347246-354445[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 1.4e-05 0.00086 20.0 3.0 1 23 193 215 193 215 0.98
2 28 0.00085 0.053 14.4 0.6 2 21 247 266 246 267 0.92
3 28 0.00018 0.011 16.5 0.7 1 23 292 315 292 315 0.96
4 28 0.0086 0.53 11.2 3.8 1 23 364 387 364 387 0.97
5 28 0.0076 0.47 11.4 0.1 1 23 404 426 404 426 0.96
6 28 0.00036 0.022 15.5 0.9 3 23 462 483 460 483 0.91
7 28 0.011 0.67 10.9 2.7 2 23 520 542 520 542 0.96
8 28 0.00037 0.023 15.5 0.8 1 23 592 615 592 615 0.97
9 28 0.0046 0.29 12.1 0.3 1 23 674 696 674 696 0.97
10 28 0.0013 0.08 13.8 4.0 2 23 708 729 707 729 0.96
11 28 0.073 4.5 8.3 1.8 2 23 741 762 740 762 0.96
12 28 0.0013 0.078 13.8 0.3 1 23 772 794 772 794 0.98
13 28 0.04 2.5 9.1 2.2 2 23 828 849 827 849 0.95
14 28 0.017 1 10.3 5.4 1 23 860 882 860 882 0.98
15 28 7.6e-05 0.0047 17.7 0.5 1 23 890 912 890 912 0.98
16 28 0.013 0.81 10.7 0.2 2 23 932 954 931 954 0.97
17 28 0.65 40 5.3 0.7 1 23 972 994 972 994 0.96
18 28 0.026 1.6 9.7 2.1 3 23 1035 1056 1033 1056 0.94
19 28 0.00089 0.056 14.3 0.5 1 23 1078 1100 1078 1100 0.97
20 28 0.48 30 5.7 0.5 2 20 1104 1122 1103 1123 0.89
21 28 8.6 5.4e+02 1.8 2.5 2 23 1143 1165 1142 1165 0.82
22 28 0.0056 0.35 11.8 0.6 1 23 1180 1202 1180 1202 0.96
23 28 1.7 1e+02 4.0 3.9 3 23 1210 1230 1208 1230 0.96
24 28 0.0018 0.11 13.4 1.4 2 23 1241 1263 1240 1263 0.95
25 28 1 63 4.7 2.9 2 23 1280 1298 1280 1298 0.90
26 28 0.41 25 5.9 1.4 2 21 1302 1321 1302 1322 0.93
27 28 0.12 7.4 7.6 0.4 2 23 1370 1391 1369 1391 0.95
28 28 0.0013 0.081 13.8 0.4 2 23 1402 1424 1401 1424 0.96

Sequence Information

Coding Sequence
ATGGCCCTCAAACTAGGGAAATGCAGACTTTGTCTGAAACTTGGTGACTTTTACTCCATATTCACAACAGACAATGAGTTACAACTATCTGAAATGGTTATGGAATGTACCAGAGTTAAAGTATTTGATGGTGATGGATTACCTGACAAGGTTTGTTCTGAATGCATTCAAAAACTTAGCAGTGCATACATATTTAAGCAACAGTGTGAGAGAGCAGACCTTGAGCTGCGAAGGAATTATGTACCTCCACCAGGTTTTACACCACCACCACCAAACAGACAGAGCAGTGATTCCGCGTTTTCCAATCAAACGGATATTTCTTATCAGAATAAACCGTCATCTTCTACCGAAGGTAAAATCTTTCCAGCCACCCGAAAACGCAGTCACGAGAGTATTGACAATGCGTCCTCCAGCAGTCAGTCGCACGACTACAATCCGAGCGGCTCTTTAAAGAAGGTCAAAAAACCTAAACCCATTAGTCAGCCTCAATACAATTCTGACACAGATTTCGATGACAATAGTGCATCAGTGCTCTCCGCTGAAGAGGAATCGGACTCTCAGAGAAAGTTGGAGGAGTTCCCTTGCCCGGTCTGCGGCAAATGTTTTGCAACGAAACACAGTATGACCCAGCACGCTAAAAGTCATGCCCGTAAGAGCTTGACGAAATTAGGTGCAAACGCTGTAGTTAACATACCCAAGAGCAATGTGGAAGACGCTAAGGACGTTGAAGATAAACTTACATGTGAGAAGTGCGGAAAGAATTTCAAATTAAAGATCATGCTGAAACGTCACTATGACACATGCGAGAACACGTTGAAAACTCAAAAGGAATTGTTGATTACACTGGAGCCCGTCGACGCAGTGATCAACACGTTTCAATGTGAAATTTGCACGGCAAAATTCAAGACTGAAGACAAATTTCGAGTACACATGAAAGCGATACATTCTATTAAAAGTGAAAAGTTGGAAGCGGCAGAAACGCCAACAGACGTATCGATGCCGTGCATTTTCTGCAAGGAACAATTCAACGATTACTACTTGTACACGTCACACTTTAACTCGTGCTCAAAGAGAAAGGACACAGATGAATTTGAATGTCCGCTTTGTCAGAGAATGTTGTCGAGGCGGAACACATTCTTCACTCACATTAGGAACTGTCACTTTGAAACGAGACAGGCTAAATCGCAAGATAAAGGCGGCAGTGACAACTTTGTTTGTCGCATATGCAACAAGAAACTTGGCAATCAGAATCAGCTTATAGAACATCTCGCTGCACACATGTCAAACATGAGTGGAGAATTGGATGAATCTGGGGTTAGCTCTAAAACAGATAAAATAATAACAGATCAGATGGAAACTCCAAATTCAGATTCTCTGTTAGATTGTAGTTATTGTGGTAAACAATTTAAGGGCAAGAAGTGGCTAATGAAACACCTCACTGCTAAACACAATGTCAGCCAACTCGAATTACCATCTGCAGCAGTCAATAAGAGTCTGCCCAAGGTGATATATAAGGACGACGAGTCTGATTCTAGTCACGACGAAATTGAAGACAATACGTGTGATATATGTGAGAAACAGTTCTCATACAGACGTACATTCCTGCAACATAAACGTCTAAAACACAATATGAGTTCGGGTCACAAGAGAGCTAAAATCAATTTAAAGGATTGCGAAGTCCGTTGCCTAATCTGCGACATAGACATGAAAGTGAGCGACATAAGTGAACATAATCAAACACATATATCGGCAAACTTGAAACCGAGGAATCTTTACACTTGTGTCGAGTGTGGTGAGAAATTCCAGAGCTGTACTTCTTTAGCTACCCACATAAAAATTGTGCATAGATTGAAGCAACCCGGCGCCACCCCGGACAAGGATGATTCTATTAATTTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGACGACAATGTCCAGAGTTACAACGACTCTACAAAGGGTCCGTCTAAATCCGAAGCAACACCGTTAGTAGATCTGAACGGATTCACATGTCCGATTTGCAACAAGAAAATGGGCACTCTTATATCACTCAAACGACACGTAAACTGGCACTCCAATGTCGGCAATAATTTAGAGAAGGCAATGGAATGTTTCGTCTGCAAGGAGAAGTTCAAATTCAAAAGCCACTATCGACTTCATATGCGAGGCCACTACACAGACACTAATCTGGATCCCAAACTTTTGACGTGCACAATCTGCAACCGACGCAGCAAACACCTGCGGGCCGCACAGGCCCACATGAACTTCCACAAGCAGACTCGTTTCAAGAACAAGGACTACGAGTGTTCCATTTGTGGTCGCGTATTTCAATACAGACGCGTCTACCTCTCGCATATGGCCATACACTACAAACGAGGGGAGAGCGTCACCAACACTATAGTAGGCGTTCCCAACGCCCAGGCTCAGGCCCTTGCCGATGCTCAGGGCAACACTGAAGGAAGCCTCGTCTGCAAACTCTGCAGCAAGGTCTGCGACTCCGAGGTCTCCCTTAAACATCACACAATCTGGCACAACTCCAAGACTATGCTCTATGGAGCACGCCACGAATGCTCACTGTGTCACCTCGTATTCACAAACAAGAGACGGCGGGAGTTGCACATGAGAACTCATTTTGAAGACGACAACGGTCCGTACAAATGTAACATTTGCAGTAAGGGCTTCATAGACGAGGGCTATTTTAACCGGCATGTGAAGGGACACAACTTCGATAATCAATCGCATCAGAAACGCATTGAGAATTTGAGAAAGCATAAGGTGAAATGTCCGATATGCGCCAGATACTATCCGGACTTGCTGAAGCTGATTCGTCACCTGCGTCGAACTCATCCGCAGAGCAAGATGATTAAAGAGGACCCTGACGCACCGCCGCCGGTCTATTACTCGTGCCAATTGTGTGCCAAAGTGTTTCTGAACGAGCAGCGGTTGAAAAATCACGAGGAGCGCCATCAGCGCAAACCCAAGTGGTACAAGTGTAAATTTTGCTCAATAAACTCGTTTTCACTAAAAGGGCACAGGATTCACATAAAGGCTCACATGAATAAGAAGTTTACGGACGATCCACTCGATTGTCCGCAGTGCGACGAGAAGTTCTATAAAGGTTATCATCTGCACTACCATTTGCGCGATGTTCACGGTATCTTGGAGACTTGGATCGACGAGGAGGCTGAAGAGAAGGTTTACGGTCCGTTACAAGAATTCCAGTGCTCGGTCTGTTTCAAAATACTAGCTAACAAGGGCAACTTCGAGCGCCACATAGACTACCATAACACCCTCCGTTGTAATTACTGCTTCGAGTATTTCACCACTCAGAAATTTCTAGATGGTCATTTGGTGTTTAGCTGTGAAAAGCGGAAACTGATCGGAGATACGGAGGTGCATTTGAGGAAAATCAAATGTGACATATGCTATAAGGCATTCCATCTGCAAGTGAAGTTGGATTGCCACTTGCGCGCTCGTCACGACATAGCAGTACAGCGGGAAGCCTCCGAGGGAAAGAAGGAATTCGTTTGCGATTTTTGCTTTAGGGTTTTCGAGAATGAAGATTCACTTGTATCACACAAATTGTACCACCGCACGGTCGGATACTTTGGTTGCTTATATTGTAATAGAAAATTCAACACAATAACGGTATACAATAAACACAAGAATCACCACTTCTCCCAGTTGAATGTGGACGAGCCCACCAAGTGTGAGCACTGTGACAAAACATTTGTACCCTTCCGCGATATGATATATCATATGAGGGACGAGCACGGCGATGATAAGGAATGGATTATAATGCCCAAGGAATCCATTGAAGAAAAATGCAATATTTGCAACAAGGTGTTCCTAAATCTGCACAGACATCTTGAATACCACGAGGAGAATAGATGCAAGAAGTGCGGCGAGTATTTCTTTTCGATGTCAGATTATGACAACCATCTCTGCGCGATCGAGAGCGACGATGAAGTGGGCAATTTGGAGTTGAGTTCGAAACCGACGTACGAGGAGTGTCGCTTCTGTTTCAAGCCGATCACTAAGAAAGACTCCAAATTGAAGCACGACAAGATTCATAGGGGCTCCGGGGCGATATCGTGCCGGTTCTGTCCTCTGAAATTCAAAACCATCGACGCTTTCAACATACATGCTTTCACGCATCGAAGTCGCAAATACAAGAAGAAGCCGCTCAAGTGTCGCGATTGCGGCGAGAAGTTTGTTCAGTATGGACCGTTTATGAAACATCTGAAGTCTGTGCATAAGTTGACGCAAAAGATGCATTATCGAGCGACCGTAATTCCGGACAAGTGCATAGTGTGCGGTGACGAATTCCCCAACTTGCACAACCATTACAGGGCGCACTTGCAGAATCAGTGTCAGCAATGTCACAAATATTTCACTTCCCACAAAGTATTCAGTCATCATGAATGCGATAAGGAGGATTTAGATCCGTCGAAAGTGTTTGTTTGCAATGAAAACCTGAATGAACTTATCAAAACGTATGTTCCGAGAGACAGGGATGAAGCAGAACAGAGATATTATGGCTTCAATGATGAAGACGATGCTGCAGACGCCCAAGATAATACGAGCCAGTATTCAGCCGAAAGCGAACCTCTAGCACTTTTCGAACATCCCGTTATATCTGGAGTACAATCTCTTTTTAAATCCGAAATCGAGAAACTCAGCACAGATGATAGTCAGGATTGTAGTGATGTTCCCAACGGAGATGAGACTGTTGCCGAAAATAATGATAAAAAAACTTTTGCGAAACAAAATGGCGATGACAAGGATGATGGCAGCGACTGTGACGTAATAGTATTAGATGAAGATTCACTGGGATTTGACTACACGTCTAACGTTATTACGATAGATTGA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTTDNELQLSEMVMECTRVKVFDGDGLPDKVCSECIQKLSSAYIFKQQCERADLELRRNYVPPPGFTPPPPNRQSSDSAFSNQTDISYQNKPSSSTEGKIFPATRKRSHESIDNASSSSQSHDYNPSGSLKKVKKPKPISQPQYNSDTDFDDNSASVLSAEEESDSQRKLEEFPCPVCGKCFATKHSMTQHAKSHARKSLTKLGANAVVNIPKSNVEDAKDVEDKLTCEKCGKNFKLKIMLKRHYDTCENTLKTQKELLITLEPVDAVINTFQCEICTAKFKTEDKFRVHMKAIHSIKSEKLEAAETPTDVSMPCIFCKEQFNDYYLYTSHFNSCSKRKDTDEFECPLCQRMLSRRNTFFTHIRNCHFETRQAKSQDKGGSDNFVCRICNKKLGNQNQLIEHLAAHMSNMSGELDESGVSSKTDKIITDQMETPNSDSLLDCSYCGKQFKGKKWLMKHLTAKHNVSQLELPSAAVNKSLPKVIYKDDESDSSHDEIEDNTCDICEKQFSYRRTFLQHKRLKHNMSSGHKRAKINLKDCEVRCLICDIDMKVSDISEHNQTHISANLKPRNLYTCVECGEKFQSCTSLATHIKIVHRLKQPGATPDKDDSINLADFCEVVVTKAEPLDDNVQSYNDSTKGPSKSEATPLVDLNGFTCPICNKKMGTLISLKRHVNWHSNVGNNLEKAMECFVCKEKFKFKSHYRLHMRGHYTDTNLDPKLLTCTICNRRSKHLRAAQAHMNFHKQTRFKNKDYECSICGRVFQYRRVYLSHMAIHYKRGESVTNTIVGVPNAQAQALADAQGNTEGSLVCKLCSKVCDSEVSLKHHTIWHNSKTMLYGARHECSLCHLVFTNKRRRELHMRTHFEDDNGPYKCNICSKGFIDEGYFNRHVKGHNFDNQSHQKRIENLRKHKVKCPICARYYPDLLKLIRHLRRTHPQSKMIKEDPDAPPPVYYSCQLCAKVFLNEQRLKNHEERHQRKPKWYKCKFCSINSFSLKGHRIHIKAHMNKKFTDDPLDCPQCDEKFYKGYHLHYHLRDVHGILETWIDEEAEEKVYGPLQEFQCSVCFKILANKGNFERHIDYHNTLRCNYCFEYFTTQKFLDGHLVFSCEKRKLIGDTEVHLRKIKCDICYKAFHLQVKLDCHLRARHDIAVQREASEGKKEFVCDFCFRVFENEDSLVSHKLYHRTVGYFGCLYCNRKFNTITVYNKHKNHHFSQLNVDEPTKCEHCDKTFVPFRDMIYHMRDEHGDDKEWIIMPKESIEEKCNICNKVFLNLHRHLEYHEENRCKKCGEYFFSMSDYDNHLCAIESDDEVGNLELSSKPTYEECRFCFKPITKKDSKLKHDKIHRGSGAISCRFCPLKFKTIDAFNIHAFTHRSRKYKKKPLKCRDCGEKFVQYGPFMKHLKSVHKLTQKMHYRATVIPDKCIVCGDEFPNLHNHYRAHLQNQCQQCHKYFTSHKVFSHHECDKEDLDPSKVFVCNENLNELIKTYVPRDRDEAEQRYYGFNDEDDAADAQDNTSQYSAESEPLALFEHPVISGVQSLFKSEIEKLSTDDSQDCSDVPNGDETVAENNDKKTFAKQNGDDKDDGSDCDVIVLDEDSLGFDYTSNVITID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01386959;
90% Identity
iTF_01386959;
80% Identity
-