Basic Information

Insect: Synanthedon myopaeformis
Gene Symbol: -
Assembly: GCA_944738625.1
Location: CALYFO010000734.1:48198-55591[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0001 0.0059 17.2 3.8 1 23 193 215 193 215 0.97

2 28 0.00079 0.046 14.4 0.6 2 21 246 265 245 266 0.92

3 28 0.00019 0.011 16.3 0.7 1 23 291 314 291 314 0.96

4 28 5.2 3e+02 2.4 0.3 3 21 334 352 333 353 0.87

5 28 0.0036 0.21 12.3 3.3 1 23 363 386 363 386 0.97

6 28 0.0018 0.11 13.2 0.2 1 23 401 423 401 423 0.95

7 28 0.00034 0.02 15.6 0.9 3 23 460 481 458 481 0.91

8 28 0.012 0.7 10.7 2.4 2 23 518 540 518 540 0.96

9 28 0.00034 0.02 15.5 0.8 1 23 590 613 590 613 0.97

10 28 0.0043 0.25 12.1 0.3 1 23 672 694 672 694 0.97

11 28 0.0012 0.07 13.8 4.0 2 23 706 727 705 727 0.96

12 28 0.068 3.9 8.3 1.8 2 23 739 760 738 760 0.96

13 28 0.0012 0.068 13.8 0.3 1 23 770 792 770 792 0.98

14 28 0.0032 0.18 12.5 1.6 2 23 826 847 825 847 0.95

15 28 0.015 0.9 10.3 5.4 1 23 858 880 858 880 0.98

16 28 3.6e-05 0.0021 18.6 0.3 1 23 888 910 888 910 0.98

17 28 0.0031 0.18 12.5 0.1 2 23 930 952 929 952 0.97

18 28 0.6 35 5.3 0.7 1 23 970 992 970 992 0.96

19 28 0.024 1.4 9.7 2.1 3 23 1033 1054 1031 1054 0.94

20 28 0.00083 0.049 14.3 0.5 1 23 1076 1098 1076 1098 0.97

21 28 0.45 26 5.7 0.5 2 20 1102 1120 1101 1121 0.89

22 28 8 4.7e+02 1.8 2.5 2 23 1141 1163 1140 1163 0.82

23 28 0.0052 0.3 11.8 0.6 1 23 1178 1200 1178 1200 0.96

24 28 0.0017 0.097 13.4 1.4 2 23 1239 1261 1238 1261 0.95

25 28 0.94 55 4.7 2.9 2 23 1278 1296 1278 1296 0.90

26 28 0.38 22 6.0 1.4 2 21 1300 1319 1300 1320 0.93

27 28 0.11 6.4 7.6 0.4 2 23 1368 1389 1367 1389 0.95

28 28 0.0012 0.071 13.8 0.4 2 23 1400 1422 1399 1422 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0001	0.0059	17.2	3.8	1	23	193	215	193	215	0.97
2	28	0.00079	0.046	14.4	0.6	2	21	246	265	245	266	0.92
3	28	0.00019	0.011	16.3	0.7	1	23	291	314	291	314	0.96
4	28	5.2	3e+02	2.4	0.3	3	21	334	352	333	353	0.87
5	28	0.0036	0.21	12.3	3.3	1	23	363	386	363	386	0.97
6	28	0.0018	0.11	13.2	0.2	1	23	401	423	401	423	0.95
7	28	0.00034	0.02	15.6	0.9	3	23	460	481	458	481	0.91
8	28	0.012	0.7	10.7	2.4	2	23	518	540	518	540	0.96
9	28	0.00034	0.02	15.5	0.8	1	23	590	613	590	613	0.97
10	28	0.0043	0.25	12.1	0.3	1	23	672	694	672	694	0.97
11	28	0.0012	0.07	13.8	4.0	2	23	706	727	705	727	0.96
12	28	0.068	3.9	8.3	1.8	2	23	739	760	738	760	0.96
13	28	0.0012	0.068	13.8	0.3	1	23	770	792	770	792	0.98
14	28	0.0032	0.18	12.5	1.6	2	23	826	847	825	847	0.95
15	28	0.015	0.9	10.3	5.4	1	23	858	880	858	880	0.98
16	28	3.6e-05	0.0021	18.6	0.3	1	23	888	910	888	910	0.98
17	28	0.0031	0.18	12.5	0.1	2	23	930	952	929	952	0.97
18	28	0.6	35	5.3	0.7	1	23	970	992	970	992	0.96
19	28	0.024	1.4	9.7	2.1	3	23	1033	1054	1031	1054	0.94
20	28	0.00083	0.049	14.3	0.5	1	23	1076	1098	1076	1098	0.97
21	28	0.45	26	5.7	0.5	2	20	1102	1120	1101	1121	0.89
22	28	8	4.7e+02	1.8	2.5	2	23	1141	1163	1140	1163	0.82
23	28	0.0052	0.3	11.8	0.6	1	23	1178	1200	1178	1200	0.96
24	28	0.0017	0.097	13.4	1.4	2	23	1239	1261	1238	1261	0.95
25	28	0.94	55	4.7	2.9	2	23	1278	1296	1278	1296	0.90
26	28	0.38	22	6.0	1.4	2	21	1300	1319	1300	1320	0.93
27	28	0.11	6.4	7.6	0.4	2	23	1368	1389	1367	1389	0.95
28	28	0.0012	0.071	13.8	0.4	2	23	1400	1422	1399	1422	0.96

Sequence Information

Coding Sequence: ATGGCCCTCAAACTAGGGAAATGCAGACTTTGTCTGAAACTTGGAGACTTTTACTCCATATTCACAACAGACAATGACTTACAACTATCTGAAATGGTCATGGAATGCACCAGAGTTAAAATATTTGATGGCGATGGATTACCAGACAAGGTTTGTTCTGAATGCATTCAGAAACTTAGCAGTGCATACATATTTAAACAACAGTGTGAAAGAGCAGACCTAGAGCTACGAAGGAATTATGTACCTCCACCAGGTTTTACGCCACCACCACCAAACAGACAGAGCAGTGATTCCGCCTTTTCCAATCAAACGGATATTTCTTATCAAACTAAACCATCATCTTCTACCGAAGGTAAAGTCTTTCCAGCCACCCGAAAACGCAGTCACGAGAGTATTGACAATGCGTCCTCCAGCAGTCAGTCGCACGACTATAATCCGAGCGGCTCTTTGAAGAAGGTCAAAAAACCGAAACCCATTAGTCAGCCTCAATACAATTCTGACACAGATTTCGATGACAACAGTGCATCCGTGCTCTCAGCTGAAGAGGAATCGGACTCTCAGAGAAAGTTGGAGGAGTTCCCTTGCCCGGTTTGCGGCAAATGTTTTGCAACGAAACACAGTATGTCCCAGCACTCTAAAAGTCATGCCCGTAAGAGCTTAACGAATTTAGCAAACGCTGTAGTTAACATACCTAAGAAGAATGTGGAAGACGCTAAGGACGTTGAAGATAAGCTTACGTGTGAGAAGTGCGGAAAGAATTTCAAATTAAAGATCATGCTGAAACGTCACTATGACACTTGCGAGAACACGTTGAAAACGCAAAAGGAATTGTTGATTACACTGGAGCCCGTCGACGCAGTGATCAACACGTTTCAATGTGAAATTTGCACTGCAAAATTCAAGACTGAAGACAAATTTCGAATACACATGAAAGCGATACATTCTATTAAAAGTGAAAAGTTGGAAACGGCAGAAACACCAACAGACGTATCGATGCCGTGTATTTACTGTAAGGAACAGTTCAACGATTACTACTTGTACACGTCGCACTTCAACTCGTGCTCCAAAAGAAAGGACACCGATGAATTTGAATGTCCGCTCTGTCAGAGGGTGTTGTCGAGGCGGAACACGTTCTTCACTCACATTAGGAACTGTCACTTTGAAACGAGACAGGCTAAATCGCAAGATAAAGGTGACAACTTTGCTTGTCGCATATGCAACAAGAAACTTAGCAATCAGAATCAGCTTATAGAACATCTCGCTGCGCATATGTCAAACATGACTGGAGAATTGGATGAATCTGGGGTTAGCTCACTAAATGAGTCCAAAATAATAACAGATCAGATGGAAACTCCCAATTCAGATTCACTGTTAGATTGTAGTTATTGTGGTAAACAGTTTAAGGGCAAGAAGTGGCTAATGAAACACCTCACTGCAAAACACAATGTCAGCCAACTCGAATTACCATCCGCAACAGTCAATAAGAGTCTGCCCAAGGTGATATATAAGGACGACGAGTCTGATTCTAGTCACGACGAAATTGAAGACAATACGTGTGATATATGTGAGAAACAGTTCTCATACAGACGCACATACCTGCAACATAAACGTCTAAAACACAATATGAGTTCGGGTCACAAGAGAGCTAAAATCAATTTGAAGGATTGCGAGGTCCGTTGTCTAATCTGCGACATAGACATGAAAGTGAGCGACATAAGTGAACATAATCAGACACATATATCGGCAAACTTGAAACCGAGGAATCTTTACACTTGTGTCGAGTGCGGTGAGAAATTCCAGAGCTGCACTTCTTTGGCTACCCACATAAAAATTGTGCATAGATTGAAGCAACCCGGCGCCATCCCGGACAAGGATGATTCTATTAATTTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGACGACAATGTCCAGAATTACAACGACTCTACAATGGGTCCGTCTAAATCCGAAGCAACACCGTTAGTAGATCTGAACGGATTCACATGTCCAATTTGCAACAAGAAAATGGGCACCCTTATATCACTCAAACGACACGTAAACTGGCACTCGAATGTCGGCAATAATTTAGAGAAGACAATGGAATGTTTCGTCTGCAAGGAGAAGTTCAAATTTAAGAGCCATTATCGGCTTCATATGCGAGGCCACTACACAGACACAAATCTGGATCCCAAACTTTTGACGTGCACGATCTGCAACCGACGCAGCAAACACCTGAGGGCTGCACAGGCCCACATGAACTTCCACAAGCAGACTCGTTTCAAAAACAAGGACTACGAGTGTTCCATTTGTGGTCGCGTGTTTCAATACAGACGCGTTTACCTCTCGCATATGGCCATACACTACAAACGAGGGGAGAGCGTCACCAACACTATAGTGGGCGTGCCCAACGCTCAGGCTCAGGCCCTCGCCGACGCCCAGGGCAACACTGAAGGAAGCCTCGTCTGCAAACTCTGCGGCAAGGTCTGCGACTCCGAGGTCTCCCTCAAACATCACACAATCTGGCACAGCTCCAAGACTATGCTCTATGGAGCACGTCACGAATGCTCCCTGTGTCACCTCGTATTCACGAACAAGAGACGACGGGAGTTGCACATGAGAACTCATTTTGAAGACGACAACGGTCCGTACAAATGCAACATTTGCGGCAAAGGCTACATAGATGAGGGCTATTTTAATCGGCACGTGAAGGGACACAACTTCGATCATCAATCGCATCAGAAACGCATAGAGAATTTGAGAAAGCATAAGGTGAAATGTCCGATATGCGCCAGATACTATCCGGACTTGGTGAAGCTGATTCGTCACCTGCGTCGAACTCATCCGCAGAGTAAGATGATTAAGGAGGACCCTGACGCACCGCCGCCGGTCTATTACTCGTGCCAATTGTGTGCCAAAGTGTTTCTGAACGAGCAGCGGTTGAAAAATCACGAGGAGCGCCATCAGCGCAAACCCAAGTGGTACAAGTGTAAATTTTGCTCAATAAACTCGTTTTCACTAAAAGGGCACAGGATTCACATAAAGGCTCACATGAATAAGAAGTTCACGGACGATCCACTCGATTGTCCGCAGTGCGACGAGAAGTTCTATAAAGGTTATCATCTGCACTACCATTTGCGCGATGTTCACGGTATCTTGGAAACTTGGATCGACGAGGAGGCTGAAGAGAAGGTTTACGGTCCATTGCAAGAATTCCAGTGTTCGGTCTGTTTCAAAATACTAGCTAACAAGGGCAACTTCGAGCGGCATATAGACTACCATAACACCCTCCGTTGTAATTACTGCTTCGAATATTTCACCACTCAGAAATTTCTGGATGGTCATTTGGTGTTTAGCTGTGAAAAGCGGAAACTGATCGGAGATACGGAGGTGCATTTGAGGAAAATCAAATGTGACATATGCTATAAGGCATTCCACTTGCAAGTGAAGTTGGATTGCCACTTGCGCGCTCGTCACGACATAACAGTACAGCGGGAAGCTTCCGAGGGAAAGAAGGAATTCGTTTGCGATTTTTGCTTTAGGGTTTTCGAGAATGAAGATTCACTTGTATCGCACAAATTGTACCACCGCACAGTCGGATACTTTGGTTGCATATATTGCAATAGAAAATTCAACACAATAACCGTTTACAATAAACACAAGACTCACCATTTCTCTCAGCTGAATGTGGACGAGCCCACCAAGTGTGAGCACTGTGACAAAACATTTGTACCGTTCCGAGATATGATATATCATATGAGGGACGAGCACGGTGATGACAAGGAATGGATTACAATGCCCAAGGAATCCATTGAAGAAAAATGCAATATTTGCAACAAAGTGTTTCTGAATCTGCACAGACATCTTGAATACCACGAGGAGAATAGATGCAAGAAGTGCGGCGAGTATTTCTTTTCGATGTCAGATTATGACAACCATCTCTGCGCGATCGAGAGCGACGATGAAGTGGGCAATTTGGAGCTGAGTTCGAAACCGCTATACGAGGAATGTCGCTTCTGTTTCAAGCCGATCACTAAGAAAGACTCCAAATTGAAGCACGACAAGATTCACAGGGGCTCTGGGGCGATATCGTGCCGGTTCTGTCCTCTGAAATTCAAAACCATTGACGCTTTCAACATACATGCTTTCACACATCGAAGTCGCAAATACAAGAAGAACCCGCTCAAGTGTCGCGATTGCGGCGAGAAGTTTGTTCAGTATGGACCGTTTATGAAACATCTGAAGTCTGTGCATAAGTTAACGCAGAAGATGCACTATCGAGCGACCGTAATTCCGGACAAGTGCATAGTGTGCGGTGACGATTTCCCCAACTTGCACAACCATTACAGGGCTCACTTGCAGAATCAGTGTCAGCAATGTCACAAATATTTCACTTCCCACAAAGTATTTAGTCATCATGAATGCGATAAGAAGGATTTGGATCCGTCTAAAGTGTTTGTTTGCAATGAAGACTTGAATGCACTTATCAAAACGTATGTTCCGAGAGACAGAGATGAAGCAGAACAGAGATATTATGGCTTCAACGACGAAGACGATGCCGCAGACGCCCAAGATAATACGAGCCAGTATTCAGCCGAAAGTGAGCCTCTAGCACTTTTCGAACATCCAGTTATATCTGGAGTACAATCGCTTTTTAAATCGGAAATCGAGAAACTCAGCACAGATGATAGTCAGGATTGTAGTGATGTTCCAAACGGAGATGAAACTGTTGTTGAAAATAATGATAATAAAACTATTGCGAAACAAAATGGCGACGATAAGGATGATGGCAGCGACTGTGACGTCATAGTATTAGATGAAGATTCAGTAGGATTTGATTGCACGTCGAACATTATTACTATAGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTTDNDLQLSEMVMECTRVKIFDGDGLPDKVCSECIQKLSSAYIFKQQCERADLELRRNYVPPPGFTPPPPNRQSSDSAFSNQTDISYQTKPSSSTEGKVFPATRKRSHESIDNASSSSQSHDYNPSGSLKKVKKPKPISQPQYNSDTDFDDNSASVLSAEEESDSQRKLEEFPCPVCGKCFATKHSMSQHSKSHARKSLTNLANAVVNIPKKNVEDAKDVEDKLTCEKCGKNFKLKIMLKRHYDTCENTLKTQKELLITLEPVDAVINTFQCEICTAKFKTEDKFRIHMKAIHSIKSEKLETAETPTDVSMPCIYCKEQFNDYYLYTSHFNSCSKRKDTDEFECPLCQRVLSRRNTFFTHIRNCHFETRQAKSQDKGDNFACRICNKKLSNQNQLIEHLAAHMSNMTGELDESGVSSLNESKIITDQMETPNSDSLLDCSYCGKQFKGKKWLMKHLTAKHNVSQLELPSATVNKSLPKVIYKDDESDSSHDEIEDNTCDICEKQFSYRRTYLQHKRLKHNMSSGHKRAKINLKDCEVRCLICDIDMKVSDISEHNQTHISANLKPRNLYTCVECGEKFQSCTSLATHIKIVHRLKQPGAIPDKDDSINLADFCEVVVTKAEPLDDNVQNYNDSTMGPSKSEATPLVDLNGFTCPICNKKMGTLISLKRHVNWHSNVGNNLEKTMECFVCKEKFKFKSHYRLHMRGHYTDTNLDPKLLTCTICNRRSKHLRAAQAHMNFHKQTRFKNKDYECSICGRVFQYRRVYLSHMAIHYKRGESVTNTIVGVPNAQAQALADAQGNTEGSLVCKLCGKVCDSEVSLKHHTIWHSSKTMLYGARHECSLCHLVFTNKRRRELHMRTHFEDDNGPYKCNICGKGYIDEGYFNRHVKGHNFDHQSHQKRIENLRKHKVKCPICARYYPDLVKLIRHLRRTHPQSKMIKEDPDAPPPVYYSCQLCAKVFLNEQRLKNHEERHQRKPKWYKCKFCSINSFSLKGHRIHIKAHMNKKFTDDPLDCPQCDEKFYKGYHLHYHLRDVHGILETWIDEEAEEKVYGPLQEFQCSVCFKILANKGNFERHIDYHNTLRCNYCFEYFTTQKFLDGHLVFSCEKRKLIGDTEVHLRKIKCDICYKAFHLQVKLDCHLRARHDITVQREASEGKKEFVCDFCFRVFENEDSLVSHKLYHRTVGYFGCIYCNRKFNTITVYNKHKTHHFSQLNVDEPTKCEHCDKTFVPFRDMIYHMRDEHGDDKEWITMPKESIEEKCNICNKVFLNLHRHLEYHEENRCKKCGEYFFSMSDYDNHLCAIESDDEVGNLELSSKPLYEECRFCFKPITKKDSKLKHDKIHRGSGAISCRFCPLKFKTIDAFNIHAFTHRSRKYKKNPLKCRDCGEKFVQYGPFMKHLKSVHKLTQKMHYRATVIPDKCIVCGDDFPNLHNHYRAHLQNQCQQCHKYFTSHKVFSHHECDKKDLDPSKVFVCNEDLNALIKTYVPRDRDEAEQRYYGFNDEDDAADAQDNTSQYSAESEPLALFEHPVISGVQSLFKSEIEKLSTDDSQDCSDVPNGDETVVENNDNKTIAKQNGDDKDDGSDCDVIVLDEDSVGFDCTSNIITID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01386959;
90% Identity: iTF_01386959;
80% Identity: -