Sque001293.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sycophila quercilanae
Gene Symbol
-
Assembly
GCA_035582995.1
Location
JAWWEP010000001.1:18116993-18141744[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 8.3e-06 0.00094 20.2 1.0 1 23 221 243 221 243 0.98
2 30 0.0036 0.41 11.9 1.9 1 23 266 289 266 289 0.96
3 30 0.00018 0.02 16.0 0.5 2 23 296 318 295 318 0.96
4 30 0.00043 0.048 14.9 0.5 1 21 338 358 338 359 0.95
5 30 0.0052 0.59 11.4 0.0 2 23 465 486 464 486 0.96
6 30 0.011 1.2 10.4 0.3 2 23 493 515 492 515 0.91
7 30 0.00016 0.018 16.2 0.1 1 23 585 608 585 608 0.96
8 30 0.097 11 7.4 0.4 1 23 614 637 614 637 0.96
9 30 0.16 18 6.8 1.5 1 23 650 672 650 672 0.97
10 30 0.0024 0.27 12.5 2.2 3 23 717 738 715 738 0.95
11 30 0.049 5.5 8.4 0.9 2 23 798 821 797 821 0.93
12 30 4.1 4.7e+02 2.3 0.0 2 23 830 852 830 852 0.84
13 30 0.098 11 7.4 0.1 2 23 859 881 858 881 0.93
14 30 1.7e-05 0.002 19.2 1.2 1 23 889 911 889 911 0.98
15 30 0.00028 0.032 15.4 3.3 1 23 987 1010 987 1010 0.97
16 30 0.0073 0.83 11.0 0.4 2 23 1017 1039 1016 1039 0.95
17 30 0.00094 0.11 13.8 4.8 1 21 1078 1098 1078 1099 0.94
18 30 0.0036 0.41 11.9 1.8 2 23 1113 1134 1112 1135 0.93
19 30 1.1 1.2e+02 4.2 2.6 1 23 1138 1160 1138 1161 0.95
20 30 0.033 3.7 8.9 0.8 2 23 1168 1191 1167 1191 0.91
21 30 1.3 1.5e+02 3.9 0.2 2 23 1199 1221 1199 1221 0.95
22 30 4.8 5.5e+02 2.1 0.0 2 23 1228 1250 1227 1250 0.87
23 30 0.3 34 5.9 2.7 2 23 1259 1281 1259 1281 0.96
24 30 0.18 21 6.6 0.8 2 23 1287 1309 1287 1309 0.93
25 30 0.073 8.2 7.8 0.4 1 23 1376 1399 1376 1399 0.96
26 30 0.01 1.1 10.5 2.7 1 21 1429 1449 1429 1450 0.94
27 30 0.43 48 5.4 1.9 2 23 1545 1567 1544 1567 0.94
28 30 0.57 65 5.0 0.4 2 23 1574 1596 1573 1596 0.95
29 30 0.22 26 6.3 1.8 1 23 1607 1629 1607 1629 0.97
30 30 0.0076 0.87 10.9 0.2 1 20 1636 1655 1636 1657 0.94

Sequence Information

Coding Sequence
ATGGATACGTCCCGGGACAGGTACGACGAGCTGTGCAGGCTCTGCGCCTCCTACGACGCCGTCAAGATGGACATCTTCGGCCAGGAGGGCAAGAACCGCCAGCTAGTCGACAAGATCCAGACCTGCCTGCCCTTCAAGATTGCTGAAAATGATCGATTACCAAAATGCCTTTGCTACAGATGCATGTACAATTTGGAGAACTTCTATGATTTTAGAACAGCCTGCGTCAATGCGGTTGCACTATTGGAAAGGTGCTTACCTCCGGACAGGGCGCAACCGCAAATAAAGCAAGAGCAGACCGAGGATGCGGAGCCATATTCGGAATTGCGCATGGAACTATTGAAAGAGAAGGAGACAACGCCGATGCTCATACCCGAAGCGCCCGTGGTAAATCCCAACGCGGCCCTCGGTACTCCGCCGAGACTCAGGTCGGAGGATGGTGAGCAAGACGCCGAGGGTTTGCCCCAGGACAACAACGACGAACACCTGGAGGACAACGACGATCACAAGTCAGACGAGTATGACATGGAGGTGGAGATGAATCCGAGTGATTTTCTGGAGATGAGCGCTATGGTACCGGAGGAGGAGAACCACGGGCTTCCGCAGCCCTCGAGCCAGGACACCGGTGTCTTCCAGCACCGCAACGAGCAGCACGAGGTCTACGTCTGTTCACTCTGCAACAAGGCCTTTAGCTCCAAGGGCCACCTGTCCCTCCACGCTCGGATTCACGTAGGCGCAGGAGACGTCATCGGCGAGAAGGTCATCACCGACGATCATACCTCGTACAAGAGGCCTTACCAGTGCGACCTTTGCAACAAGTCGTATTCCACCGCCAAGCATCGCTGGGGACACGTATCTACCACGCATCGgggACATCCTGCGGTAACGTGCGGTTACTGTTCGCGTATCTACTCGACGCGCACGAATCTTGAGGAGCACATAAAGTCTCGGCATGCGGGTCTGCCACCCCCACCAGAAACACCCGTGCCGTACGTTCAGCCGGATTCTCGATTCCAGTGCAAGACGTGTCCCAAGATGTATACCAATATTACGGATCTCAACAAGCACAGCAGAGTTTGTCAGGGCGATCATCGCAAGGACTTCGCCAATAACAGCTTCAATGCTCATAGCTTTGGCTcaaaacttaaaaatgcGCTTAAAAATGAGCCGAACTCAGACATGTCAAGTGTAGATTCAGATTATGAGAATAGAGATTATAAAAGTGCCGAGGCAAAACTTGCAAAAAATCCACAGTTAACCATTCTCAAACAAGCCCTAATCAAGGGCGAAAGTGTTAAGAAGGAATATGAAGAAAGGCAGAAAATGTTAAGCAAAGCCAAAAAGCAAGGCAACTCAACTAACAAAGattCCGAACCTGAAGGGAAAAGATGGTATTGTGAGGTTTGTCCTGTGAACTTTGCTACGGTGGACGAGTTGAGGCAACATGAAAAGTCACACGATGCTGACAAACCTTTTATATGCATTTTGTGTGAGAAGGACTTTGTTCTCAAATCATCCTTGAGCAGGCATATACTTACGTCTCATGGAGTAGATCCGACACCACTAGTCGAGAGTGACAAATGTCTGAAAAAATCGGTACAAGAATCCAACAATCATCCCTTGGCGATAATAAAGGAGGAAATAAACATTACCAAAGATAATTCCTCATCGCCATTTTCTGCCGATAATATGGAAAATGACGATGAAGAGCAAGAAAACGGAAATGAAAACATGCTCGAAATGGAGACTGTATTCGTTTGTGAAATTTGTACGCGAGACTTTAACGATCGAGCGTCGCTCTGGTTGCACATTCGTGCTACTCACAAAGAGTATGCAGCTTTTGCCTGTGGAGTTTGTCTGAAAATCTGCCAGGACAATGCGCAACTACTGAATCATGTCAATATGTACCACGGAGGTTCAAAACTTTTAATGTCGGAACAGCGAAGGTACAGTTGCACGATTTGCGGAAGGCAACACGATTCAAGGAAGAAACTTATAACACACGTGTCTATCCACAACGTGGATCCGGCTTACGATCCAGCAAGTTTCGTACAGTTGAATACGAACTACTACAATGAAAATGTTAACAGCAATGAGGGTAATGATGGACTAATCATGGATTGTGATGAGGACAGCGAGAAGATAGACTGCTACATTTGCTGCAAATCATTTCCTAACGAAGATCATCTCATTCGCCATCAAAGGAACGCTCATAAATCGGAACAGATGGGTACAGGTGAATACCCTGGCGGATCACCTGGTCAAAATGGAACCGGTAACCGCGCTCAGTATCATCTTTTCTTTGTATGCGAACTTTGCGGTAGTTCACATCCCAGCAAGTGGGAGCGCTGGTTACACGTCAGTAGCGCTCACGGTAATGAGACTACTATTAGGTGTGAGCGTGACGATTGCGGTAAAATTTTCGCAACAAAGACATTACGCAACGAGCACGCTCAGCATCATCAGCTGCAAGGCAGTTCGCCTAATACCTGTGAGATCTGTGGAAAGTTGTGGGGCAGTAGAGTGGATTATTGGAAGCATGTGATGGGCGTGCACGCGGACACGGTGCCACTCATCTGCGGCGTTTGTCTAAAAGTCTTCCCGGACGTGATGCAACTGAGTCAGCACGTTAAGCTTAAACACTGGCCTCTGACCAACGGCGATTTCAGTTGCGACATCTGCGGTCGACCCTACTCAAACAAGAGCAAAATGTCCAGGCACCGCAAGATCCACGGACTCGATGGCGAAGTTTACAATCCGGCAGCAACAAACAGCAGTCTTGTTATTAACGACGCAATGAGTGAGATGTCCTCTCTTCCGGTATCGGTGCAAATGGATAACGGTTTACCTAAACCGGTGGATCCAGCCTCGATGGACTTAAGCTGTGAGATGTGTGGTGATCTTAAGTTCCCCTGTTTAGAGGATCTGTGCAATCATAGAAGAATTGCACACAATCTTTTCCCATGCGATTTGTGCAACAAGTGCTACGGTCGCACTTCGCACCTGTGGAAGCACGTAAATCGCGTGCACAAGGGTCATGAGGATGTTACCTGTCGTTACTGTCTAAAGACGAGCGCATCTAAGGAGCATCTAGCCGCTCATATCGCTAAGATACATCGGTACGAGCCCGAGGTGAAGAGCGAATTTAAAGATACGATGAACTTTAAACACAGCTACAACATGGCTGCagctgctgccgctgccgcaGCTGCTGCCGAAGAAGATGGTCTGCACTTCTgcgaaaaatgcaataaatcgTTCCATAAAAGGTACTTGTTACGACGTCATATGAAGGGTTGCCAGAACTATCGTAAGGATCCAGGTGCCCTGTTGACAAGATGTCGCGCCTGCGAGCGAATCTTCAAGGATCGCGCAAGTTTGCAAAAACACATCGAGAATCATCACAGTTCGTACGAATGTCACCTCTGCAAGGAGACCATCACGTCCAAGCTCGGTATAATGACACATAATCGCGTGCACCACATGCAACACCCCGACCTCACCTGCGAACTCGAGAGTTGCCGCAAGCTGTTCAGAACGAAAGAAGATCTTGAATCGCATCGCAAAGATCATAAACATTTCGGCATGCCTAATGTTTGCGATTTCTGCGGTGACACcgtggaaaataaattgaaattgaaaatgcacATACTGAGTTTGCACCGAAATGAGATCGGTGTTTCTTGCGGAGTTTGCCTCATCCCCATGAAGGATCCGAAGGATCTGAAGAAACACGTGGAAGATGTCCATGCGAGCATATTGCAGAGACCTAATACCTGTCAGgTGTGCGGTAAGCAATACGCTTCGAAGTGGAAAGCTTTTGATCACACGAAGAAGTGTCACGGTAAAGTATTCCGTACTTGCAAGCAGTGCCTAGCAGTGTTCACTTCGGACGAGGAGCTGCGCTCGCACTACGAGCACGTGCACAACATTCCGAAGGATCAACTCGACGCTTACCAGTACCGTCTCGAGGTTTCTGGAGTCAAGATGGAAGATTACGACCTCGGTCCGCTCGAAGTCGTTGTAAAGGAGGAGCCCGATGAGCTCGACTTCGATGTCGACGCATTCGACGACGACAACGGTAACTCGAACGACTCCAAGCGTCGTCGATCTGTCACCGACACATTTGATTGCGAGATCTGTCcggagatatttttaaatcacgaGCTGCTCTCCTCACACTACCGCAACGTGCACAACACCGATCCGGAGCGTATGTTCAAACGTGTGAAACTCGAATTTACCACTAATAAAGCTAAGAAAAAGATGCGAGACCGCGAGAATTATGAATGTAAGAACTGCCAAAAGCAGTTCTGCACTAAGACCCTGTACTTGAGCCACGTGAATGTGTGTACGCGCAAATCTGTGCCAGGTCCACCTACGTCGATTCTAGAGGCGCACTTGAAGAACAACAATCAGATTCATCAGATAAAACGTGAGGAGCCCGAACCGATCATATGCGAGACGAATCTCAACATTCCGGACTTCAACCTCTTCGAAGATATCAACATGCAGTTGTCCGGTCAAAAACCAGTGCCGAGCCTTATGCCGCTCGGTCACTCGTCCAAGTCCGCCAAATATTCGCGCAAAGATTCGCGCAAGGTGTACGACGAGTCGACGAACACCGAGTGTACTTGCGAGGTTTGCGGTAAACAGTGGCCGGCAAAGAAACACCTCTGGCAGCATCTCATACGCTTCCACCGTGCGGAGGCGGCTGTCACATGCGGTGTCTGTCTCAAGTTGTGCGCTACTTACGATGATTTGTCGGAACACTTGAAGAACGTGCACCCGGCGATCCTCTCCACGGCCGGTAACAACTTTACCTGCAAAATCTGCGGCAGGTATCACAACGCTCGAAGCAAGCTGCTGTTGCACATGAGCATCCATATAAATTGCAAGAACAACTTCATGTGCGGCCGGTGCAACAGGAGCTTCGAGAACGACGAGAAGCTGAAGGAGCACATGGGCACTTGCCTCGGCGTAAAGGAGGAACCGACTGCCGAAGCCGACGCTGAGAATATCACCGTGAAAGAGGAGAACGAGGAGAAGGGTAGCCTAATTGGCGACGAAGAAGAGGCGCCCGAAGAAAACGAGTACGAATCGGAGGATAATTCGGACAACGGAAACAGCAGCTCCAATGACTCCGACAGCAACAGCAGTAACAGCAACAGCGACAGTTCTAGCGATAACAGTGACGACGACAGCAGCGACGACGAAGACGGTCGCTCGCGTAATATCGATGAGGATAGCAGTAATAGTAAGGACTCTGATAATGTCGATCAAGTTCAAGTACAGCAATCAGCGATTAAGATTGAAGAACACGAGACAATGAGTCTAGGTGAAGACgacgaagaggaggaggatgaGGATGAGGATGAGGACGAGGAGAAGCCGTCGAGATACGGTGGATTGTCCGAGTCCGAGGAGGACGAGTACCTGAAACAGCAGCAAgtgcagcaacaacaacaaatgCAACAGCATCAGATGCAGCAGCACCAGATGCAACAGCAGCAAATGCAGCAACATTACGAGATGGTTCAGAAGGAGCCCATGCTCGTCAATTATTCGGATGACGAGGGCCCACCTGCTCTCAGTCCCATGCTGCCTATGGCGATCAAACAGACAATCAGCGAGCAAAACGAAGACAGTCAAGAGGAACTGAGGGTACATGCACTCAGCGACTCGATAAGCGGCAAGAAAGATGATACTAAGAGTGACGACGACAGTGATGAAGACAGCAGTGAGGACGAAGCCGACGACTCCGAAGAGGGAGTAGTCCCGCAGGCTGAGGTCGTCGATCCGAATGCTGCTTTCCATGTGGATAATTCGAGGAGTAGTAACGAAGgcGAGGAAGAGCAAGAAGAGGCCGAGCTACAGGAAGTAGAAGAGCAGGAGGAAGGAGAGGAGGTTGAAGTCGAAGAAgaacaagaagaagaagaagaagaagaagaaggcgaAGAGGGCGAAGTCGAAGAGGAGATACAGGAACATGTACATGAACACGAAGAGCTGGAAGAAGTCGAGGAGATGCAAGAGGTTGAAGAGGGCGAGGAAGAAGAGGTCGTCGAGCACGACATGAACGAAGCGGAGGTGCTGGAAGTCGACGAGAACGACATGCACAATCTAAACGGCACTGTACTGATGCTCACCAACGACGCGGACGGCAATCAAATCCTCATCCAGCGCAACATGTCCGACCTCGAGAACGACGAGTCAGTCCACGATATGGCGCAATACGTATTCCAGGACGGCACTGGTTTCGCTCTCGAGGACTACGAGGCGATCGTAGAGAGCCAAGCCGACGAGGAAGACGAGGAACACCAGCAGCACCAACACTTCGAGATGGAGATTGGTCAAGAGGTCGAGGAGCACGAGCATGTGCAAGAGGCAGAGGCTGAAGAACTCGAGGAAGAGGAGGTGGAAGCGCCGATGGCGAACGATGAGGAACACAGTTCCTGTGCCAAAAGCTAA
Protein Sequence
MDTSRDRYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIAENDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPDRAQPQIKQEQTEDAEPYSELRMELLKEKETTPMLIPEAPVVNPNAALGTPPRLRSEDGEQDAEGLPQDNNDEHLEDNDDHKSDEYDMEVEMNPSDFLEMSAMVPEEENHGLPQPSSQDTGVFQHRNEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPPPPETPVPYVQPDSRFQCKTCPKMYTNITDLNKHSRVCQGDHRKDFANNSFNAHSFGSKLKNALKNEPNSDMSSVDSDYENRDYKSAEAKLAKNPQLTILKQALIKGESVKKEYEERQKMLSKAKKQGNSTNKDSEPEGKRWYCEVCPVNFATVDELRQHEKSHDADKPFICILCEKDFVLKSSLSRHILTSHGVDPTPLVESDKCLKKSVQESNNHPLAIIKEEINITKDNSSSPFSADNMENDDEEQENGNENMLEMETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICQDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPAYDPASFVQLNTNYYNENVNSNEGNDGLIMDCDEDSEKIDCYICCKSFPNEDHLIRHQRNAHKSEQMGTGEYPGGSPGQNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSAHGNETTIRCERDDCGKIFATKTLRNEHAQHHQLQGSSPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPDVMQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEVYNPAATNSSLVINDAMSEMSSLPVSVQMDNGLPKPVDPASMDLSCEMCGDLKFPCLEDLCNHRRIAHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCLKTSASKEHLAAHIAKIHRYEPEVKSEFKDTMNFKHSYNMAAAAAAAAAAAEEDGLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYECHLCKETITSKLGIMTHNRVHHMQHPDLTCELESCRKLFRTKEDLESHRKDHKHFGMPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHASILQRPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEELRSHYEHVHNIPKDQLDAYQYRLEVSGVKMEDYDLGPLEVVVKEEPDELDFDVDAFDDDNGNSNDSKRRRSVTDTFDCEICPEIFLNHELLSSHYRNVHNTDPERMFKRVKLEFTTNKAKKKMRDRENYECKNCQKQFCTKTLYLSHVNVCTRKSVPGPPTSILEAHLKNNNQIHQIKREEPEPIICETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGHSSKSAKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCATYDDLSEHLKNVHPAILSTAGNNFTCKICGRYHNARSKLLLHMSIHINCKNNFMCGRCNRSFENDEKLKEHMGTCLGVKEEPTAEADAENITVKEENEEKGSLIGDEEEAPEENEYESEDNSDNGNSSSNDSDSNSSNSNSDSSSDNSDDDSSDDEDGRSRNIDEDSSNSKDSDNVDQVQVQQSAIKIEEHETMSLGEDDEEEEDEDEDEDEEKPSRYGGLSESEEDEYLKQQQVQQQQQMQQHQMQQHQMQQQQMQQHYEMVQKEPMLVNYSDDEGPPALSPMLPMAIKQTISEQNEDSQEELRVHALSDSISGKKDDTKSDDDSDEDSSEDEADDSEEGVVPQAEVVDPNAAFHVDNSRSSNEGEEEQEEAELQEVEEQEEGEEVEVEEEQEEEEEEEEGEEGEVEEEIQEHVHEHEELEEVEEMQEVEEGEEEEVVEHDMNEAEVLEVDENDMHNLNGTVLMLTNDADGNQILIQRNMSDLENDESVHDMAQYVFQDGTGFALEDYEAIVESQADEEDEEHQQHQHFEMEIGQEVEEHEHVQEAEAEELEEEEVEAPMANDEEHSSCAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01380123;
90% Identity
iTF_01381524; iTF_00713110; iTF_00714584; iTF_00713823;
80% Identity
-