Basic Information

Gene Symbol
-
Assembly
GCA_900480045.1
Location
UXGC01000053.1:45177-67547[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 8.1e-06 0.00086 20.3 1.0 1 23 222 244 222 244 0.98
2 30 0.0035 0.37 12.0 1.9 1 23 267 290 267 290 0.96
3 30 0.00056 0.06 14.5 0.5 2 23 297 319 296 319 0.96
4 30 0.00042 0.044 14.9 0.5 1 21 339 359 339 360 0.95
5 30 0.0051 0.54 11.5 0.0 2 23 464 485 463 485 0.96
6 30 0.011 1.1 10.5 0.3 2 23 492 514 491 514 0.91
7 30 0.00015 0.016 16.3 0.1 1 23 584 607 584 607 0.96
8 30 0.094 10 7.5 0.4 1 23 613 636 613 636 0.96
9 30 0.16 17 6.8 1.5 1 23 649 671 649 671 0.97
10 30 0.0023 0.24 12.6 2.2 3 23 716 737 714 737 0.95
11 30 0.048 5.1 8.5 0.9 2 23 797 820 796 820 0.93
12 30 4 4.3e+02 2.4 0.0 2 23 829 851 829 851 0.84
13 30 0.26 28 6.2 0.1 2 23 858 880 857 880 0.93
14 30 1.7e-05 0.0018 19.3 1.2 1 23 888 910 888 910 0.98
15 30 0.00027 0.029 15.5 3.3 1 23 986 1009 986 1009 0.97
16 30 0.0071 0.76 11.1 0.4 2 23 1016 1038 1015 1038 0.95
17 30 0.00092 0.098 13.9 4.8 1 21 1077 1097 1077 1098 0.94
18 30 0.0035 0.37 12.0 1.8 2 23 1112 1133 1111 1134 0.93
19 30 1 1.1e+02 4.3 2.6 1 23 1137 1159 1137 1160 0.95
20 30 0.032 3.4 9.0 0.8 2 23 1167 1190 1166 1190 0.91
21 30 1.3 1.3e+02 4.0 0.2 2 23 1198 1220 1198 1220 0.95
22 30 4.7 5e+02 2.2 0.0 2 23 1227 1249 1226 1249 0.87
23 30 0.29 31 6.0 2.7 2 23 1258 1280 1258 1280 0.96
24 30 0.16 17 6.8 0.9 2 23 1286 1308 1286 1308 0.93
25 30 0.071 7.5 7.9 0.4 1 23 1375 1398 1375 1398 0.96
26 30 0.027 2.9 9.2 2.0 1 21 1428 1448 1428 1449 0.92
27 30 0.41 44 5.5 1.9 2 23 1544 1566 1543 1566 0.94
28 30 0.56 59 5.1 0.4 2 23 1573 1595 1572 1595 0.95
29 30 0.22 23 6.4 1.8 1 23 1606 1628 1606 1628 0.97
30 30 0.016 1.7 10.0 0.2 1 20 1635 1654 1635 1656 0.94

Sequence Information

Coding Sequence
ATGGATACGTCCAGGGACAGGTACGACGAGCTCTGCAGGCTCTGCGCCTCCTACGATGCCGTCAAGATGGACATCTTCGGCCAGGAAGGCAAGAACCGCCAGCTAGTCGACAAGATCCAGACCTGCCTGCCCTTCAAGATTGCGGAGGATGATCGATTACCAAAATGCCTTTGCTACAGATGCATGTACAATTTGGAGAACTTCTATGATTTTAGAACAGCCTGCGTCAATGCGGTCGCACTGCTGGAAAGATGTTTACCGGCGGACAGGGAGCAACCGCAGATAAAGCAGGAGCAGACCGAGGATGCGGAGCCATACTCGGAATTGCGTATGGAGCTCTTGAAAGAGAAGGAGACAACGCCGATGCTCATACCCGAGGCGCCTGTGGTAAATCCCAACGCGGCTCTCGGTACTCCACCGAGACTCAGGTCGGAGGATGGCGAGCAAGACGGCGAGGGTTTGCCCCAGGAGAACAACGACGAACACCTTGAGGACCACGACGATGATCACAAGTCGGACGAGTACGACATGGAGGTGGAGATGAATCCGAGTGACTTCCTGGAGATGAGCGCGATGATGCCCGAGGAGGAGAACCACGGGCTGCCGCAGCCCTCGGCCCAGGACACCGGCGTCTTCCAGCACCGCAACGAGCAGCACGAGGTTTACGTCTGCTCGCTCTGCAACAAGGCCTTCAGCTCCAAGGGCCACTTGTCCCTCCACGCCCGGATTCACGTGGGCGCCGGCGACGTCATCGGCGAGAAGGTCATCACCGACGATCACACCTCGTACAAGAGGCCTTACCAGTGCGACCTCTGCAACAAGTCGTACTCCACCGCGAAGCATCGCTGGGGACACGTATCTACCACGCATCGgggACATCCTGCAGTGACGTGCGGCTACTGTTCGCGTATCTATTCGACGCGCACGAATCTTGAGGAACATGTAAAGTCTCGACATGCGGGCCTGCCACCGCCACCGGAGATACCCGTGCCGTACGTTCAGCCGGACTCTCGATTCCAGTGCAAGACGTGCCCCAAGATGTACACGAATATCACGGATCTCAACAAGCACAGCAGAGTTTGTCAGGGCGATCAGCGTAAGGACTTAGCCAACAACAGCTTCAATGCCCACAGCTTTAGCTCAAAACTTAAAAACGCATTAGAGCCGAATTCAGACATGTCAAGTGTAGATTCGGATTATGAGAATAGAGATTACAAGAGTGCTGAGGCAAAACTTGCCAAAAATCCACAGTTAACTATTCTCAAACAAGCTCTAATCAAGGGCGAAAGTGTTAAGAAGGAGTATGAAGAAAGGCAGAAAATGTTGAGCAAAGCGAAAAAACAAAGCAACTCAACAAACAAAGaTTCCGAGACTGAAGGCAAAAGGTGGTATTGTGAGGTTTGTCCCGTCAACTTTGCTACAGTAGACGAATTGAGGCAGCATGAAAAATCACACGATGCTGACAAGCCTTTCATATGTATTTTGTGTGAGAAGGACTTCGTTCTCAAATCATCCTTGAGCAGGCATATACTTACGTCTCATGGAGTAGATCCGACACCGTTAGTGGAGAGTGACAAATGCCTGAAAAAATCGGTGCAAGAGTCTAATAATCATCCGGAAACGATAGTAAAGGAAGAAATAAACATTACCAAAGATAATTCCTCATCCCCATTTTCTGCCGATAATATGGAAAATGACGATGAAGAACAAGAAAACGGAAATGAAAACATGCTCGAAATGGAGACTGTATTTGTTTGTGAAATTTGTACGCGAGACTTTAACGATCGAGCGTCACTTTGGTTACACATTCGTGCTACTCATAAAGAGTATGCAGCCTTTGCCTGTGGAGTTTGTCTGAAAATCTGCCAGGACAATGCGCAACTACTGAATCATGTCAATATGTATCATGGAGGTTCAAAACTTTTGATGTCTGAACAGAGAAGgTACAGTTGTACAATCTGCGGAAGGCAACACGATTCGAGGAAGAAACTTATAACTCACGTGTCTATCCACAACGTGGATTCGTCTTATGATCCAGCTAGTTTCGTACAATTGAATACAAACTActataatgaaaatgttaatagcAATGAGGGTAATGATGGATTAATCATGGATTGCGATGAAGACAGTGAGAAGATAGACTGCTACATTTGCTGCAAGTCGTTCCCTAACGAAGATCATCTCATTCGCCATCAAAGGAATGCTCACAAATCTGAACAGATGGGTACTGGCGAATATCCAGGTGGATCGCCTGGTCAAAATGGAACGGGTAATCGCGCCCAATATCATCTTTTCTTTGTATGCGAACTTTGCGGCAGTTCGCACCCCAGTAAGTGGGAACGTTGGCTACACGTCAGTAGTGCTCACGGAAATGAAACTACTATAAGGtgcGAACGTGACGATTGCGGTAAAATTTTCGCGACAAAGACGTTGCGCAACGAGCATGCTCAGCATCACCAACTGCAAGGCAATTCGCCCAATACCTGTGAGATCTGCGGAAAATTGTGGGGCAGTCGAGTAGATTATTGGAAGCATGTGATGGGCGTGCATGCAGACACGGTGCCACTCATCTGCGGCGTCTGTCTCAAAGTCTTCCCGGACGTGTTGCAACTGAGTCAGCACGTCAAGCTTAAGCACTGGCCTTTGACCAACGGCGATTTCAGTTGCGACATCTGCGGTCGGCCCTACTCAAACAAGAGCAAAATGTCGAGACACCGCAAGATCCACGGACTCGATGGCGAAGTTTACAATCCAGCTGCAACCAACAGCAGCCTTGTTATTAACGATGCTATGAGTGAAATGTCTTcTCTTCCGGTATCGGTGCAAATGGATAACGGTTTACCTCAACCGGTAGATCCAGCCTCAATGGACTTGAGCTGCGAGATGTGCGGCGATCTTAAATTCCCCTGTTTAGAAGATCTGTGCAATCATAGAAGAATTGCACACAACCTTTTCCCATGCGATTTGTGCAACAAGTGTTACGGTCGAACTTCTCACCTTTGGAAGCACGTAAATCGTGTGCACAAAGGTCATGAGGATGTCACTTGCcgttattgtttaaaaacaagCGCATCTAAAGAGCACCTAGCGGCCCACATCGCTAAAATACACCGGTATGAGCCTGAGGTAAAGAGCGAGTTTAAAGACACGTTGAACTTCAAGCAGAGCTATAACATGGCCGCGGCGGCTGCCGCTGCTGCAGCTGCTGCTGAGGAAGACGGTCTGCACTTCTGCGAAAAGTGTAACAAATCGTTCCacaaaaggtaCTTGTTACGTCGTCATATGAAGGGTTGTCAGAACTATCGAAAGGATCCGGGTGCCCTGTTAACAAGATGCCGCGCTTGCGAGCGAATCTTCAAGGATCGCGCGAGCTTACAAAAACACATCGAGAACCACCACAGTTCGTACGAATGTCACCTCTGCAAGGAGACCATCACCTCTAAGCTCGGCATAATGACACATAATCGTGTGCATCACATGCAACATCCTGACCTCACCTGCGAGCTCGAGAGTTGCCGCAAACTGTTCAGGACAAAAGAAGATCTCGAATCCCACCGCAAAGATCATAAACATTTCGGCATGCCTAACGTTTGCGATTTCTGCGGCGACACCGTTGagaataaactaaaattgaaaatgcacATACTGAGCTTGCATAGGAATGAGATTGGTGTTTCCTGTGGAGTTTGTCTCATTCCCATGAAGGATCCAAAGGATCTCAAGAAACACGTGGAAGATGTTCACGCGAGCATACTGCAGAGACCAAATACTTGTcagGTTTGCGGCAAGCAATACGCTTCGAAGTGGAAAGCGTTCGACCACACGAAGAAGTGCCACGGTAAAGTATTCCGTACTTGCAAGCAGTGCCTGGCAGTATTCACTTCGGACGAGGACCTGCGCTCGCATTACGAGCACGTGCACAACATTCCGAAAGATCAGCTTGACGCTTATCAGTATCGCCTCGAGGTGTCTGGAGTCAAAATGGAAGATTACGACCTCGGCCCGCTTGAAGTCGTCGTGAAGGAAGAGCCCGACGAGCTCGATTTCGATGTCGATGCGTTCGAAGATGACAATGGCAACTCGAACGATTCCAAGCGACGCCGATCCGTCACCGACACGTTTGACTGCGAAATCTGTCCGGAGATATTCCTGAATCACGAGCTGCTGTCCTCGCATTATCGCAACGTGCACAATACCGACCCGGAGCGTATGTTCAAACGCGTGAAACTTGAATTTACGCCTAACAAGGCTAAGAAGAAGATGCGAGAGCGCGAGAACTACGAGTGTAAAAACTGCCAAAAACAGTTCTGCACTAAGACACTGTACCTGGGTCACGTGAACGTGTGCACGCGTAAATCTGTGCCTGGTCCACCTACGTCGATTCTGGAGGCGCACTTGAAGAACAACAATCAGATTCATCAGATAAAGCGCGAGGAACCCGAGCCGATTCTCTGTGAGACGAATCTCAACATTCCAGACTTCAACCTCTTCGAAGATATCAATATGCAGTTGTCTGGACAAAAACCGGTGCCGAGTCTTATGCCGCTCGGTCACTCGTCCAAGTCCGCCAAGTACTCGCGCAAAGATTCGCGCAAGGTGTACGACGAGTCAACGAATACCGAGTGCACCTGCGAGGTTTGCGGCAAACAGTGGCCGGCTAAGAAGCACCTGTGGCAGCATTTGATACGTTTCCACCGTGCGGAGGCGGCTGTCACATGCGGCGTCTGTCTTAAGCTGTGCGCTACTTATGACGATCTGTCGGAGCACTTGAAGAACGTGCACCCGGCGATCCTCTCCACGGCCGGTAACAACTTTACCTGCAAAATCTGCGGCAGGTATCACAATGCGCGAAGCAAACTGCTGCTGCACATGAGCATCCATATCAACTGCAAGAACAACTTCATGTGTGGTCGGTGCAACAGGAGCTTTGAGAACGACGAGAAGCTGAAGGAGCATATTGGAACGTGCCTCGGCGTGAAGGAGGAACAGACTGCCGAAGCCGATGCTGACAGTATCGTCGTAAAAGAGGAGAACGAGGAGAAGGGTAGCTTGATTGGCGATGAAGAAGAGGCGCCCGAAGAGAACGAATATGAATCGGAGGACAATTCGGATAACGGAAATAGTAGCTCCAATGACTCCGACAGCAACAGCAGTAACAGCAACAGCGATAGTTCTAGCGACAACAGCGATGATGACAGCAGCGATGACGAAGATGGTCGATCTCGCAATGTTGATGAGGACAGTAGCAATAGCAAGGAGTCTGACAACGTTGATCAAGTTCAAGTGCAGCAGGCTGCGGTAAAGATTGAGGAAAACGAGACGATGAGTCTAGGCGAGGATGACGAAGATGAGGAGGATGAGGATGAGGACGAGGAGAAGCCGTCGAGGTACGGTGTGATGTCCGAGTCCGAAGATGACGAgaaaattaaatataaaacctTTACAGGTGAGGAAGAGCAAGAAGAAGGCGAAATGCAGGAAGTAGAAGAGGAGCAAGAAGAAGGAGAGGAGGTTGAGGCTGAGGTCGAGGCtgaagaggaagaggaggaaggcGAGGTCGAAGAGGAAGTGCAGGATCAAGAACAAGAACAAGAACACGAGGAGCAAGAAGAGCTGGAAGAAGTTGAGGAACAAGAGATGCAAGAGGTCGAAGAGGGCGAGGAGGAAGAAGTCGAGCACGATATGAACGAAGCGGAGGTGCTGGAAGTCGATGAGAACGACATGCACAACCTGAACGGCACCGTACTGATGCTCACCAACGACGCCGACGGCAATCAGATCCTCATCCAGCGCAATATGTCCGACCTCGAGAACGACGAGTCGGTCCACGATATGGCGCAGTACGTATTCCAAGACGGCACTGGTTTTGCTCTCGAGGACTACGAAGCGATCGTGGAAAGCCAAGCCGACGAAGAAGACGAGGAACATCAGCAGCACCAACACTTCGAGATGGAAATCGGTCAAGAAGTCGAGGAGCACGAGCACGTGCAAGAGGAGGAGGCTGAGGAagtcgaggaggaggaggtggaggcgCCGATGGCGAACGATGAGGAACACAGTTCCAGTGCCAAAAGCTAA
Protein Sequence
MDTSRDRYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPADREQPQIKQEQTEDAEPYSELRMELLKEKETTPMLIPEAPVVNPNAALGTPPRLRSEDGEQDGEGLPQENNDEHLEDHDDDHKSDEYDMEVEMNPSDFLEMSAMMPEEENHGLPQPSAQDTGVFQHRNEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHVKSRHAGLPPPPEIPVPYVQPDSRFQCKTCPKMYTNITDLNKHSRVCQGDQRKDLANNSFNAHSFSSKLKNALEPNSDMSSVDSDYENRDYKSAEAKLAKNPQLTILKQALIKGESVKKEYEERQKMLSKAKKQSNSTNKDSETEGKRWYCEVCPVNFATVDELRQHEKSHDADKPFICILCEKDFVLKSSLSRHILTSHGVDPTPLVESDKCLKKSVQESNNHPETIVKEEINITKDNSSSPFSADNMENDDEEQENGNENMLEMETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICQDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDSSYDPASFVQLNTNYYNENVNSNEGNDGLIMDCDEDSEKIDCYICCKSFPNEDHLIRHQRNAHKSEQMGTGEYPGGSPGQNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSAHGNETTIRCERDDCGKIFATKTLRNEHAQHHQLQGNSPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPDVLQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEVYNPAATNSSLVINDAMSEMSSLPVSVQMDNGLPQPVDPASMDLSCEMCGDLKFPCLEDLCNHRRIAHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCLKTSASKEHLAAHIAKIHRYEPEVKSEFKDTLNFKQSYNMAAAAAAAAAAAEEDGLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYECHLCKETITSKLGIMTHNRVHHMQHPDLTCELESCRKLFRTKEDLESHRKDHKHFGMPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHASILQRPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDLRSHYEHVHNIPKDQLDAYQYRLEVSGVKMEDYDLGPLEVVVKEEPDELDFDVDAFEDDNGNSNDSKRRRSVTDTFDCEICPEIFLNHELLSSHYRNVHNTDPERMFKRVKLEFTPNKAKKKMRERENYECKNCQKQFCTKTLYLGHVNVCTRKSVPGPPTSILEAHLKNNNQIHQIKREEPEPILCETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGHSSKSAKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCATYDDLSEHLKNVHPAILSTAGNNFTCKICGRYHNARSKLLLHMSIHINCKNNFMCGRCNRSFENDEKLKEHIGTCLGVKEEQTAEADADSIVVKEENEEKGSLIGDEEEAPEENEYESEDNSDNGNSSSNDSDSNSSNSNSDSSSDNSDDDSSDDEDGRSRNVDEDSSNSKESDNVDQVQVQQAAVKIEENETMSLGEDDEDEEDEDEDEEKPSRYGVMSESEDDEKIKYKTFTGEEEQEEGEMQEVEEEQEEGEEVEAEVEAEEEEEEGEVEEEVQDQEQEQEHEEQEELEEVEEQEMQEVEEGEEEEVEHDMNEAEVLEVDENDMHNLNGTVLMLTNDADGNQILIQRNMSDLENDESVHDMAQYVFQDGTGFALEDYEAIVESQADEEDEEHQQHQHFEMEIGQEVEEHEHVQEEEAEEVEEEEVEAPMANDEEHSSSAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01380123;
90% Identity
iTF_01380779;
80% Identity
-