Ecal001610.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eurytoma californica
Gene Symbol
-
Assembly
GCA_035586675.1
Location
JAXIUT010000001.1:24116801-24139593[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 9.2e-06 0.0012 20.2 1.0 1 23 221 243 221 243 0.98
2 30 0.004 0.51 11.9 1.9 1 23 266 289 266 289 0.96
3 30 0.0002 0.025 16.0 0.5 2 23 296 318 295 318 0.96
4 30 0.00047 0.061 14.9 0.5 1 21 338 358 338 359 0.95
5 30 0.0058 0.74 11.4 0.0 2 23 463 484 462 484 0.96
6 30 0.012 1.5 10.4 0.3 2 23 491 513 490 513 0.91
7 30 0.00017 0.022 16.2 0.1 1 23 583 606 583 606 0.96
8 30 0.11 14 7.4 0.4 1 23 612 635 612 635 0.96
9 30 0.18 23 6.8 1.5 1 23 648 670 648 670 0.97
10 30 0.0026 0.34 12.5 2.2 3 23 715 736 713 736 0.95
11 30 0.025 3.2 9.4 1.3 2 23 796 819 795 819 0.93
12 30 4.6 5.9e+02 2.3 0.0 2 23 828 850 828 850 0.84
13 30 0.11 14 7.4 0.1 2 23 857 879 856 879 0.93
14 30 1.9e-05 0.0025 19.2 1.2 1 23 887 909 887 909 0.98
15 30 0.00031 0.04 15.4 3.3 1 23 985 1008 985 1008 0.97
16 30 0.0081 1 11.0 0.4 2 23 1015 1037 1014 1037 0.95
17 30 0.001 0.13 13.8 4.8 1 21 1076 1096 1076 1097 0.94
18 30 0.004 0.51 12.0 1.8 2 23 1111 1132 1110 1133 0.93
19 30 0.33 42 5.9 2.3 1 23 1136 1158 1136 1159 0.95
20 30 0.036 4.6 8.9 0.8 2 23 1166 1189 1165 1189 0.91
21 30 1.4 1.8e+02 3.9 0.2 2 23 1197 1219 1197 1219 0.95
22 30 5.3 6.9e+02 2.1 0.0 2 23 1226 1248 1225 1248 0.87
23 30 0.33 43 5.9 2.7 2 23 1257 1279 1257 1279 0.96
24 30 0.18 23 6.7 0.9 2 23 1285 1307 1285 1307 0.93
25 30 0.08 10 7.8 0.4 1 23 1374 1397 1374 1397 0.96
26 30 0.031 4 9.1 2.0 1 21 1427 1447 1427 1448 0.92
27 30 0.47 60 5.4 1.9 2 23 1543 1565 1542 1565 0.94
28 30 0.63 81 5.0 0.4 2 23 1572 1594 1571 1594 0.95
29 30 0.25 32 6.3 1.8 1 23 1605 1627 1605 1627 0.97
30 30 0.0097 1.2 10.7 0.3 1 20 1634 1653 1634 1655 0.94

Sequence Information

Coding Sequence
ATGGATACGTCCAGGGACAGGTACGACGAGCTGTGCAGGCTCTGCGCCTCCTACGACGCCGTCAAGATGGATATCTTCGGCCAGGAAGGCAAGAACCGCCAGCTAGTCGACAAGATCCAGACCTGCCTGCCCTTCAAGATTGCGGAGGATGATCGATTACCAAAATGCCTTTGCTACAGATGCATGTACAATTTGGAGAACTTCTATGATTTTAGAACGGCCTGCGTCAATGCGGTCGCGCTGCTGGAAAGATGTTTACCGCCGGACAGGGTGCAACCGCAGATAAAGCAGGAGCAAACCGACGATGCGGAGCCATACTCGGAATTGCGCATGGAGCTCTTGAAAGAGAAGGAGACGACGCCGATGCTCATACCCGAGGCGCCCGTGGTAAATCCCAATGCGGCTCTCGGTACTCCGCCGAGACTAAGGTCGGAGGATGGCGAGCAGGACGGCGAGGGTTTACCCCAGGACAACAATGACGAACGCCTGGAGGACAACGAAGATCACAAGTCGGACGAGTACGACATGGAGGTGGAGATGAATCCAAGCGACTTCCTGGAGATGAGCGCGATGGTCCCCGAGGAGGAGAACCACGGGCTACCACAGCCCTCGGCCCAAGACACGGGCGTCTTCCAGCACCGCAACGAGCAGCACGAGGTATACGTCTGCTCGCTCTGCAACAAGGCCTTCAGCTCCAAGGGCCACCTGTCCCTCCACGCCCGGATTCACGTAGGTGCCGGCGACGTCATAGGCGAGAAGGTCATCACCGACGATCACACCTCGTACAAGAGGCCTTACCAGTGCGACCTCTGCAACAAGTCGTACTCCACCGCAAAGCATCGCTGGGGACACGTATCTACCACGCATCGggGACATCCTGCGGTGACGTGCGGTTACTGCTCGCGTATCTACTCGACGCGCACGAATCTTGAGGAACATATAAAGTCTCGACATGCGGGCCTGCCACCGCCACCTGAGGCACCCGTGCCGTATGTTCAGCCGGATTCTCGATTCCAGTGTAAGACGTGCCCCAAGATGTACACGAATATCACGGATCTCAACAAGCACAGCAGAGTTTGTCAGGGCGATCAGCGCAAGGACTTCGCCAACAACAGCTTCAATGCCCACAGCTTTAGCTCTAAACTTAAAAACGCATTAGAGCCGAATTCAGACATGTCAAGTGTAGATTCGGATTATGAGAATAGAGATTACAAGAGTGCTGAGGCAAAACTTGCCAAAAATCCACAGTTAACTATTCTCAAACAGGCTCTAATCAAGGGCGAAAGTGTTAAGAAGGAGTATGAAGAAAGGCAGAAAATGTTGAGCAAAGCGAAAAAACAAAGCAACTCAACAAACAAAGattcCGAGACTGAAGGAAAAAGATGGTATTGTGAAGTTTGTCCCGTCAACTTTGCAACGGTGGACGAATTGAGGCAGCATGAAAAATCACATGACGCTGACAAGCCTTTCATATGTATTTTGTGTGAGAAGGACTTCGTTCTCAAATCATCCTTGAGTAGGCATATACTTACGTCTCATGGAGTAGATCCGACACCGTTGGTCGAGAGTGACAAATGCCTGAAAAAATCGGTGCAAGAGTCTAATAATCATCCGGTATCGGTAGTAAAGgaagaaataaacattaccAAAGATAATTCCTCATCCCCATTTTCTGCCGATAATATGGAAAATGACGATGAAGAACAAGAAAACGGAAATGAAAACATGCTCGAAATGGAGACTGTATTTGTTTGTGAAATTTGTACCCGAGACTTTAACGATCGAGCATCACTTTGGTTACACATTCGCGCTACTCATAAAGAGTATGCAGCCTTTGCCTGTGGAGTTTGTCTGAAAATCTGCCAGGACAATGCACAACTACTGAATCATGTCAATATGTATCATGGAGGttcaaaacttttaatgtCTGAACAGAGAAGgTACAGTTGTACAATTTGCGGAAGGCAACACGATTCAAGGAAGAAACTTATAACTCACGTGTCTATCCACAACGTGGATCCGGCTTACGATCCAGCCAGTTTTGTACAATTGAATACGAACTACTACAATGAAAACGTTAACAGCAATGAAGGAAATGATGGATTAATCATGGATTGCGATGAAGACAGCGAGAAGATAGACTGCTACATTTGCTGCAAGTCGTTTCCTAACGAAGATCATCTCATTCGCCATCAAAGGAATGCTCACAAATCTGAACAGATGGGTACTGGCGAATATCCAGGTGGATCGCCTGGTCAAAATGGAACAGGCAATCGCGCCCAGTATCACCTTTTCTTTGTATGCGAACTTTGCGGCAGTTCCCATCCCAGTAAGTGGGAACGTTGGCTACACGTCAGTAGTGCTCACGGAAATGAGGCTACTATAAGGtgCGAGCGCGACGATTGCGGTAAAATTTTCTCGACGAAGACATTGCGCAACGAGCACGCTCAGCATCACCAACTGCAAGGCAATTCACCCAATACCTGTGAGATCTGCGGAAAATTGTGGGGTAGTCGAGTAGATTATTGGAAGCATGTGATGGGCGTGCATGCAGACACGGTGCCACTCATTTGCGGCGTGTGTCTCAAAGTCTTCCCGGACGTGATGCAACTGAGTCAGCACGTCAAGCTTAAGCACTGGCCTTTGACCAACGGCGACTTCAGTTGCGACATCTGCGGTCGACCCTACTCAAACAAGAGCAAAATGTCGAGGCACCGCAAGATCCACGGGCTTGATGGCGAAGTTTACAATCCTGCTGCGACCAACAGCAGCCTTGTTATTAACGATGCAATGAGTGAAATGTCCTCTCTTCCGGCATCGGTGCAAATGGATAACGGTTTACCTCAACCGGTAGATCCAGCCTCGATGGACTTGAGCTGTGAGATGTGTGGTGATCTTAAATTCCCCTGTTTAGAAGATCTGTGCAATCATAGAAGAATTGCACACAACCTTTTCCCATGCGATTTGTGCAACAAGTGCTACGGTCGAACTTCTCACCTTTGGAAGCACGTAAATCGTGTACATAAGGGTCATGAGGATGTCACTTGCCGTTACTGTTTAAAAACGAGCGCATCTAAGGAGCACCTAGCGGCCCACATCGCTAAAATACACCGGTATGAGCCTGAGGTAAAGAGCGAGTTTAAAGACACGTTGAATTTCAAGCACAGTTATAACATGGCCGCggctgctgccgctgccgcaGCTGCTGCTGAGGAAGACGGTCTGCACTTCTGCGAAAAGTGCAACAAATCGTTCCacaaaaggtaCTTGTTACGTCGTCATATGAAGGGTTGTCAGAACTATCGTAAGGATCCCGGTGCCCTGTTAACAAGATGCCGCGCCTGCGAGCGAATCTTCAAGGATCGTGCAAGTTTGCAAAAGCATATCGAGAATCATCATAGTTCATACGAGTGTCATATCTGTAAGGAGACTATCACCTCTAAGCTTGGTATAATGACACATAACCGCGTGCACCACATGCAACATCCTGATCTCACCTGTGAACTCGAGAGTTGTCGCAAACTGTTCAGGACAAAAGAAGATCTCGAATCCCATCGCAAAGATCATAAACATTTCGGCATGCCTAATGTTTGCGACTTCTGCGGCGACACCGttgagaataaattgaaattgaaaatgcacATACTGAGCTTGCACAGGAATGAGATTGGTGTTTCCTGTGGCGTTTGTCTCATTCCCATGAAGGATCCAAAGGATCTCAAAAAACACGTGGAAGATGTCCACGCGAGCATACTGCAGAGACCAAATACTTGCcaggtTTGCGGCAAGCAATACGCTTCGAAGTGGAAAGCGTTCGACCACACGAAGAAGTGCCACGGTAAAGTATTCCGTACTTGCAAGCAGTGCCTGGCAGTGTTCACTTCGGACGAGGACCTGCGCTCGCACTACGAGCACGTGCACAACATTCCGAAGGATCAACTCGACGCTTACCAGTATCGCCTCGAGGTGTCTGGAGTCAAGATGGAAGATTACGACCTCGGACCGCTCGAAGTCGTTGTGAAGGAAGAGCCCGACGAGCTCGACTTCGATGTCGACGCATTCGAAGATGACAATGGCAACTCAAACGACTCCAAGCGACGCCGATCCGTCACCGACACGTTTGACTGCGAAATCTGCCCGGAGATATTCCTTAATCACGAGCTGCTCTCCTCGCACTATCGCAACGTGCACAATACCGACCCGGAGCGTATGTTCAAACGCGTGAAACTGGAATTTACGACTAACAAGGCTAAGAAGAAGATGCGAGAACGCGAAAACTACGAGTGTAAAAACTGTCAAAAGCAGTTCTGCACTAAGACTCTGTACCTGGGCCACGTGAACGTGTGCACGCGCAAATCTGTACCTGGTCCGCCTACGTCGATTCTAGAGGCGCACTTAAAGAACAACAATCAGATTCATCAGATAAAGCGCGAGGAGCCCGAGCCGATCCTCTGCGAGACGAATCTCAACATTCCGGACTTCAACCTCTTCGAAGATATCAATATGCAGTTGTCCGGACAAAAGCCGGTGCCAAGTCTTATGCCGCTCGGTCACTCGTCCAAGTCCGCCAAGTACTCGCGCAAAGATTCGCGCAAGGTGTACGACGAGTCAACTAACACCGAGTGCACCTGCGAGGTTTGCGGCAAACAGTGGCCGGCTAAGAAGCACCTCTGGCAGCATTTGATACGCTTCCACCGTGCGGAGGCGGCTGTCACATGCGGCGTGTGTCTTAAGCTGTGTGCTACTTACGACGATCTGTCGGAGCACTTGAAGAACGTGCACCCGGCCATCCTCTCCACGGCCGGTAACAACTTTACCTGCAAAATCTGCGGCAGGTATCACAACGCTCGAAGCAAACTGCTGCTGCACATGAGCATCCATATCAACTGCAAGAACAACTTTATGTGCAGCCGGTGCAACAGGAGCTTCGAGAACGACGAGAAGCTGAAGGAGCACATTGGAACGTGCCTCGGCGTGAAGGAAGAACAGACTGCCGAAGCCGATGCTGACAGTATCGTCGTAAAAGAGGAGAACGAGGAGAAGGGTAGTTTGATTGGCGATGAAGAAGAGGCACCCGAAGAGAACGAGTACGAATCGGAGGACAATTCGGACAACGGAAACAGCAGCTCCAATGACTCcgacagcaacagcagcaacagcaacagcgaTAGTTCTAGCGATAACAGCGACGACGACAGCAGCGATGACGAAGATGGTCGCTCGCGCAATATTGATGAGGACAGTAGCAATAGCAAGGACTCTGATAACGTCGATCAAGCTCAAGTGCAGCAGACCGCAGTAAAGATTGAGGAAAACGAGACGATGAGTCTAGGCGAGGATGACGAAGAAGACGAGGAAGAGGACGAGGACGAGGAGAAGCCGTCGAGGTACGGCGTGATGTCCGAGTCCGAAGAGGACGAGTACCTGAAACAGCAGCAAatgcagcagcaacaacaaatGCAACAGCATCAgatgcagcagcagcaaatGAAGCAGCGCTACGAGATGGTTCAGAAGGAGCCCATGCTCGTCAATTATTCGGACGACGAGGGCCCGCCTGCTCTCAGTCCTATGCTGCCTATGGCGATCAAACAAACAATCAGCGAGCAAAACGAAGACAGTCAAGAGGAACTGCGGGTACATGCACTCAACGACTCGATAAACGTCAAGAAAGAGGATGTTAAGAGCGATGACAGCGATGAGGACAGTAGCGACGAGGATGATGCTGAGGATTCTGAGGAGGGAGTTGTCCCACAGGCCGAAGTGGTCGACCCGAATGCTGCTTTCCACGTAGATAATTCGAGGAGTAGTAATGAAGGTGAGGGAGAGCAAGAAGAAGGCGAAATGCAGGAAGTAGAAGAGGAGCAAGAGGAAGGAGAGGAGGTTGAGGCTGAGGTCGAGGCtgaagaggaagaggaggaaggCGAGGTCGAAGAGGAAGTTCAGGAACAAGAACAAGATCAAGAACACGAGGAGCAGGAAGAGCTGGAAGAAGTTGAGGAACAGGAGGAGATGCAAGAGGTTGAAGAGGGCGAGGAGGAAGAGGTCGAGCACGACATGAACGAAGCGGAGGTGCTGGAAGTCGACGAGAACGACATGCACAACCTGAACGGCACCGTACTGATGCTCACCAACGACGCGGACGGCAATCAGATCCTCATCCAGCGCAATATGTCCGACCTCGAGAACGACGAGTCGGTCCATGATATGGCGCAGTACGTATTCCAGGACGGCACTGGCTTCGCTCTCGAGGACTACGAGGCGATCGTGGAAAGCCAAGCCGACGAGGAAGACGAGGAACATCAGCAACACCAACACTTCGAGATGGAGATCGGTCAAGAAGTCGAGGAGCACGAGCACGTGCAAGAGGAAGAAGCTGAGGAAgtcgaggaggaggaggtggaggcGAACGATGAGGAACACAGTTCCAGTGCCAAAAGCTAA
Protein Sequence
MDTSRDRYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPDRVQPQIKQEQTDDAEPYSELRMELLKEKETTPMLIPEAPVVNPNAALGTPPRLRSEDGEQDGEGLPQDNNDERLEDNEDHKSDEYDMEVEMNPSDFLEMSAMVPEEENHGLPQPSAQDTGVFQHRNEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPPPPEAPVPYVQPDSRFQCKTCPKMYTNITDLNKHSRVCQGDQRKDFANNSFNAHSFSSKLKNALEPNSDMSSVDSDYENRDYKSAEAKLAKNPQLTILKQALIKGESVKKEYEERQKMLSKAKKQSNSTNKDSETEGKRWYCEVCPVNFATVDELRQHEKSHDADKPFICILCEKDFVLKSSLSRHILTSHGVDPTPLVESDKCLKKSVQESNNHPVSVVKEEINITKDNSSSPFSADNMENDDEEQENGNENMLEMETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICQDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPAYDPASFVQLNTNYYNENVNSNEGNDGLIMDCDEDSEKIDCYICCKSFPNEDHLIRHQRNAHKSEQMGTGEYPGGSPGQNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSAHGNEATIRCERDDCGKIFSTKTLRNEHAQHHQLQGNSPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPDVMQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEVYNPAATNSSLVINDAMSEMSSLPASVQMDNGLPQPVDPASMDLSCEMCGDLKFPCLEDLCNHRRIAHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCLKTSASKEHLAAHIAKIHRYEPEVKSEFKDTLNFKHSYNMAAAAAAAAAAAEEDGLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYECHICKETITSKLGIMTHNRVHHMQHPDLTCELESCRKLFRTKEDLESHRKDHKHFGMPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHASILQRPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDLRSHYEHVHNIPKDQLDAYQYRLEVSGVKMEDYDLGPLEVVVKEEPDELDFDVDAFEDDNGNSNDSKRRRSVTDTFDCEICPEIFLNHELLSSHYRNVHNTDPERMFKRVKLEFTTNKAKKKMRERENYECKNCQKQFCTKTLYLGHVNVCTRKSVPGPPTSILEAHLKNNNQIHQIKREEPEPILCETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGHSSKSAKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCATYDDLSEHLKNVHPAILSTAGNNFTCKICGRYHNARSKLLLHMSIHINCKNNFMCSRCNRSFENDEKLKEHIGTCLGVKEEQTAEADADSIVVKEENEEKGSLIGDEEEAPEENEYESEDNSDNGNSSSNDSDSNSSNSNSDSSSDNSDDDSSDDEDGRSRNIDEDSSNSKDSDNVDQAQVQQTAVKIEENETMSLGEDDEEDEEEDEDEEKPSRYGVMSESEEDEYLKQQQMQQQQQMQQHQMQQQQMKQRYEMVQKEPMLVNYSDDEGPPALSPMLPMAIKQTISEQNEDSQEELRVHALNDSINVKKEDVKSDDSDEDSSDEDDAEDSEEGVVPQAEVVDPNAAFHVDNSRSSNEGEGEQEEGEMQEVEEEQEEGEEVEAEVEAEEEEEEGEVEEEVQEQEQDQEHEEQEELEEVEEQEEMQEVEEGEEEEVEHDMNEAEVLEVDENDMHNLNGTVLMLTNDADGNQILIQRNMSDLENDESVHDMAQYVFQDGTGFALEDYEAIVESQADEEDEEHQQHQHFEMEIGQEVEEHEHVQEEEAEEVEEEEVEANDEEHSSSAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01380123;
90% Identity
iTF_01380779;
80% Identity
-