Ssin026449.1
Basic Information
- Insect
- Stratiomys singularior
- Gene Symbol
- ken
- Assembly
- GCA_954870665.1
- Location
- OX940880.1:2644079-2646711[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.3e-12 2.4e-09 37.9 0.3 4 43 254 293 252 295 0.90 2 3 1 2.9e+02 2.4 0.0 28 38 324 334 323 340 0.88 3 3 1.5e-15 4.3e-13 49.9 0.0 3 38 359 393 357 396 0.95
Sequence Information
- Coding Sequence
- atgcATCATCTGAAATGGATGACCCATGCCGACACTATAATGGAGCTGCAGCGGGGCCTACACAATGACGAAGCGTCATGCGATGTTCTGCTTACTTCTGACAAAGGCATCTTTTTCCGGGCTCACCGATTTTTATTGTGTTTCTGTAGTGACTATTTCAAAGATATGTTCCGGGACGTTCCGGCCAACCAGGAAGTGACGGTTATTATCCCGGAAGTGCGACCTAGTATATTGAAAACAATCCTCGACTTCATCTATACTGGAGAAGCGTGCGTTTCTTCAACAGATATGAcagattttttcaatacatttaacCTGCTCGAAATTAAAAGCGGGATAAACTGCGAACGTCGAATTCTACCCAAGCAAGAACCCACTGCACAGTATCAAGAAGGACTTACGATAGAACCTGTTGATGATATTGAGATCGAAGTACAACAACAAGCTGACACGGTGGATAAATCCGAGGAAACGGATGGAATGCAATCAGAAAAGGACCTTGAATATCTGGAAGTGTATAGTTCTCATGAGAAATTTGCCCAATATGCCATTGAACAGTCGAATAATGACTACATATTAACCGAAACAACAGAACCCAGCTTCGTCCTACCAGAGGAGAAGGCTGAAAATGAAATCACAATAAATGCGGACGAAGTCGAAGATGCTGAAACAATGGAACTCGAGCCAAAGTTTAAACTGCAAAAAACTGCGAAGATGTACAAGACAGAGGAGGTGCAGGGAAGCCCATCGAGAGTAGCGGCGTTCGAGGCGGCAGTGCAGGAGGTATTGCGGCTCGGTGTGAGTCTACAAAAAGCAGCAACGAAAtataacatttcaaaaacagTTCTTTGGCGAAGAGTGCGGAAAAACAGTGCGTATAAGGCCGAACGCGAACATCCAATGCTCAATTCAGCGATCAAAATGCTCGAAAAAGGAGAATCACTAAAGACAATCAGTCAAATGATAAAGATTCCGATCTCGACGTTGCACCGCCATAAAGTGCGTCTTTTGCAAGAAGGCCGTCTACCACAACATATTCAGGTGAAACGACGCGACGCCAACGACAATCTGAAGGAACGACTGGCTGATGCGATAAACGCCTGCGCTCGTGGTATGTCACAAAATCAAGCTGCCAACGTTTATTCTGTGCCAAAGTCGACGCTATGGCGGCACTTGCAGAAGCAAGCTTGCTCTGTAAAACTGGAACACCAAAGCAAAGACGACATCGCTATGTCGAGTTAA
- Protein Sequence
- MHHLKWMTHADTIMELQRGLHNDEASCDVLLTSDKGIFFRAHRFLLCFCSDYFKDMFRDVPANQEVTVIIPEVRPSILKTILDFIYTGEACVSSTDMTDFFNTFNLLEIKSGINCERRILPKQEPTAQYQEGLTIEPVDDIEIEVQQQADTVDKSEETDGMQSEKDLEYLEVYSSHEKFAQYAIEQSNNDYILTETTEPSFVLPEEKAENEITINADEVEDAETMELEPKFKLQKTAKMYKTEEVQGSPSRVAAFEAAVQEVLRLGVSLQKAATKYNISKTVLWRRVRKNSAYKAEREHPMLNSAIKMLEKGESLKTISQMIKIPISTLHRHKVRLLQEGRLPQHIQVKRRDANDNLKERLADAINACARGMSQNQAANVYSVPKSTLWRHLQKQACSVKLEHQSKDDIAMSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01375962; iTF_01127606; iTF_01127237; iTF_01087928; iTF_01088641; iTF_01043545; iTF_01043990;
- 90% Identity
- iTF_01375962;
- 80% Identity
- iTF_01375962;