Onig034801.1
Basic Information
- Insect
- Oxycera nigricornis
- Gene Symbol
- ttk
- Assembly
- GCA_963942545.1
- Location
- OZ012662.1:49875861-49877233[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1e-12 1e-09 39.5 0.1 3 43 251 291 249 293 0.90 2 3 0.6 2.8e+02 2.9 0.0 28 39 322 333 300 339 0.88 3 3 1.9e-15 8.9e-13 49.3 0.0 3 38 357 391 355 394 0.95
Sequence Information
- Coding Sequence
- ATGCATCATCTGAAATGGATGACCCATGCAGACACCATCATGGAGATGCAGCGCAGCCTGCTCCACAGCGACGCCGCGTCCTGCGACGTGGTGCTGGCGTCCGACAAAGGAGTCGTTTTCCGCGCGCACCGATTCCTGCTGTGTTTCTGTAGCGACTATTTCAAAGAAATGTTCCGGGACGTTCCAGGCGGCCAGGAAGTGACGATTATCGTGCCGGAAGTGCGCCCGAGCATACTCAAGACAATCCTGGACTTCATATACACGGGCGAAGTGTGCGTCTCGTCCACGGACATGACGGACTTCTTCAACACGTTCAACCTGCTGGAAATCAAAAGCGGGATCAACTGCGAGCGGCGAGTGGCGCCCAAGTTGGAACAGTACCGGGAGGAGCTGACCATCGAGCCCGTGGACGAAATCGAGATCGAGGTGCAGCAGCAGCCCGAAAACGTGGACAAGACCGAGGAAACAGATGGCATGCAATCGGAAAAGGAGTTGGAATACCTCGAAGTGTACAGCTCGCACGAGAAATTCGCGCAGTACGCCATCGAGCAGGCCAACAGCGACTACATTCtaacggaaacgacggaaccgGGCTTTGTGCTGCCACTCGAAAAGGCCGACAATGAAATCACGATAAGCGCGGACGAAGTGCGGACTCCGGCCACAGTCGAGCTCGAGTCCAAGTTCAAGCTGCCCAAGGGCCAAAAACTGTTCAAGGCGGACGAGCTGCAGGGCGTCCCGTCGCGGGGAGAAGCGTTCGAGGCAGCCGTGCAGGAAGTGCTGCACTTGGGCACGAGTTTGCAGAAGGCGGCGACCAAGTACAACATCTCGAAGACGGTCTTGTGGCGACGCGTGCGGAAGAACAGCGCGTACAAGGCGGAGCGCGAGCACCCCATGCTCAGCGCCGCCATCAAAATGCTCGAGAAGGGCGAATCGCTCAAGACAATCAGCCAGATGATCAAGATCCCGATTTCGACGCTGCACCGGCACAAAGTGCGACTGTTGCACGAGGGCCGTCTGCCGCAGCACATACAGGTCAAGCGTCGGGATGCCAACGACAACCTGAAGGAGCGACTGGCGGACGCAATCAATGCTTGTGCGGGCGGCATGTCCCAAAACCAGGCGGCCAACGTGTATTCCGTGCCCAAATCCACTTTGTGGCGGCACCTGCAGAAGCAAGCGTGCACCGTGAAAATCGAGACTCAAATGGCGGACGAGATGTCCTTGCCCAGCTAA
- Protein Sequence
- MHHLKWMTHADTIMEMQRSLLHSDAASCDVVLASDKGVVFRAHRFLLCFCSDYFKEMFRDVPGGQEVTIIVPEVRPSILKTILDFIYTGEVCVSSTDMTDFFNTFNLLEIKSGINCERRVAPKLEQYREELTIEPVDEIEIEVQQQPENVDKTEETDGMQSEKELEYLEVYSSHEKFAQYAIEQANSDYILTETTEPGFVLPLEKADNEITISADEVRTPATVELESKFKLPKGQKLFKADELQGVPSRGEAFEAAVQEVLHLGTSLQKAATKYNISKTVLWRRVRKNSAYKAEREHPMLSAAIKMLEKGESLKTISQMIKIPISTLHRHKVRLLHEGRLPQHIQVKRRDANDNLKERLADAINACAGGMSQNQAANVYSVPKSTLWRHLQKQACTVKIETQMADEMSLPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01375646;
- 90% Identity
- iTF_01127606;
- 80% Identity
- iTF_01127606;