Oorn126664.1
Basic Information
- Insect
- Odontomyia ornata
- Gene Symbol
- ken
- Assembly
- GCA_963969285.1
- Location
- OZ017741.1:309342333-309343628[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.6e-11 1e-08 37.9 0.3 4 43 253 292 251 294 0.90 2 3 3.2 1.2e+03 2.4 0.0 28 38 323 333 322 339 0.88 3 3 2.1e-14 7.9e-12 47.8 0.0 3 38 358 392 356 395 0.95
Sequence Information
- Coding Sequence
- ATGCACCATTTAAAGTGGATGACCCATGCAGATACTCTCATGGAAATACAACGGAACTTGCACAATGACGAGTCGTCGTGCGATGTGCTGTTGACTTCCGACAAAGGAATCTTTTTCCGAGCCCACCGATTTTTGTTGTGTTTCTGTAGTGACTATTTCAAAGACATGTTCCGGGACGTTCCGGCCGGCCAGGAAGTGACGGTTATTATTCCGGATGTACGTCCGAGCATATTAAAAACGATCCTCGATTTCATTTATACTGGCGAGGCTTGTGTGTCCTCGACAGATATGACCGATTTTTTCAATACAttcaatttacttgaaattaagAGTGGAATCAACTGCGAACGTCGAACCGTGCCCAAGACAGAAGCAGTGCAACAATATCAAGAAGGATTGACGATAGAACCCGTGGACGACATCGAAATAGAAATCCAGCAGCCCAATGACACTGTGGAAAAATCAGAGGAGACTGATGGTATGCAGTCAGAAAAAGAACTTGAATATCTAGAAGTATATAGTTCTCATGAGAAATTCGCACAGTATACCATCGAGCAGTCCAATAATGACTACATCTTAACGGAAACAACCGAACCAAGTTTTGTGCTGCCAGTAGAGAAGGCTGAGAATGAAATAACGATAAACCCGGACGAAGTACAAGATGTGGAAACGATGGAACTGGAGAAGAATTATAAAGTACAAAAGCcacaaaaaatttacaaagaagACGTCCAAGGAAGTCCGTCTAGAGTGGCTGCATTTGAAGCTGCAGTACAAGAGGTACTGCGGCTGGGGGTCAGCTTACAAAAAGCAGCGACGAAATATAATATTTCAAAAACAGTTCTCTGGCGAAGAGTTCGAAAGAACAGCGCGTATAAGGCCGAAAGGGAGCATCCGATGCTGAGTTCAGCGATCAAGATGCTTGAGAAGGGCGAATCGTTAAAGTCAATCAGTCAAATGATAAAGATCCCAATATCCACGTTGCATCGACATAAAGTCCGTTTATTGCAGGAAGGACGCCTGCCTCAGCACATACAAGTAAAACGTCGCGATGCCAACGACAATCTAAAGGAAAGGCTAGCAGAAGCGATCAGCGCTTGCGGTCGTGGAATGTCGCAAAACCAAGCAGCTAATCTTTTTTCAGTGCCCAAATCAACCTTATGGCGACATCTGCAGAAGCAAAGTTGTACTCTGAAATTGGAGGGTGATGTGAAAGAAGAGATTTTGCCAAATTAA
- Protein Sequence
- MHHLKWMTHADTLMEIQRNLHNDESSCDVLLTSDKGIFFRAHRFLLCFCSDYFKDMFRDVPAGQEVTVIIPDVRPSILKTILDFIYTGEACVSSTDMTDFFNTFNLLEIKSGINCERRTVPKTEAVQQYQEGLTIEPVDDIEIEIQQPNDTVEKSEETDGMQSEKELEYLEVYSSHEKFAQYTIEQSNNDYILTETTEPSFVLPVEKAENEITINPDEVQDVETMELEKNYKVQKPQKIYKEDVQGSPSRVAAFEAAVQEVLRLGVSLQKAATKYNISKTVLWRRVRKNSAYKAEREHPMLSSAIKMLEKGESLKSISQMIKIPISTLHRHKVRLLQEGRLPQHIQVKRRDANDNLKERLAEAISACGRGMSQNQAANLFSVPKSTLWRHLQKQSCTLKLEGDVKEEILPN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01375646;
- 90% Identity
- iTF_01088641;
- 80% Identity
- iTF_01088641;