Basic Information

Insect: Stenurella melanura
Gene Symbol: RREB1
Assembly: GCA_963583905.1
Location: OY757310.1:160604393-160610345[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.8e-05 0.004 19.7 0.9 1 23 59 81 59 81 0.99

2 16 0.0017 0.24 14.2 0.2 1 23 94 116 94 116 0.98

3 16 0.00013 0.019 17.6 6.4 1 23 122 144 122 144 0.98

4 16 0.26 36 7.3 0.1 1 23 205 229 205 229 0.87

5 16 0.16 23 7.9 1.2 2 23 235 257 235 257 0.96

6 16 5.4 7.6e+02 3.1 1.3 1 20 303 322 303 324 0.86

7 16 0.16 22 8.0 0.1 1 23 451 473 451 473 0.96

8 16 3.3e-05 0.0046 19.6 0.8 1 23 482 504 482 504 0.99

9 16 0.0018 0.26 14.1 3.1 1 23 510 533 510 533 0.97

10 16 0.0011 0.15 14.8 3.0 1 23 935 958 935 958 0.97

11 16 0.0011 0.15 14.8 0.4 2 23 1175 1196 1174 1196 0.97

12 16 0.28 39 7.2 6.3 1 23 1202 1225 1202 1225 0.97

13 16 0.093 13 8.7 1.1 1 20 1254 1274 1254 1275 0.94

14 16 0.19 27 7.7 0.9 1 23 1335 1358 1335 1358 0.96

15 16 0.037 5.2 10.0 0.4 3 23 1405 1425 1403 1425 0.93

16 16 0.017 2.3 11.0 5.9 1 23 1431 1453 1431 1453 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.8e-05	0.004	19.7	0.9	1	23	59	81	59	81	0.99
2	16	0.0017	0.24	14.2	0.2	1	23	94	116	94	116	0.98
3	16	0.00013	0.019	17.6	6.4	1	23	122	144	122	144	0.98
4	16	0.26	36	7.3	0.1	1	23	205	229	205	229	0.87
5	16	0.16	23	7.9	1.2	2	23	235	257	235	257	0.96
6	16	5.4	7.6e+02	3.1	1.3	1	20	303	322	303	324	0.86
7	16	0.16	22	8.0	0.1	1	23	451	473	451	473	0.96
8	16	3.3e-05	0.0046	19.6	0.8	1	23	482	504	482	504	0.99
9	16	0.0018	0.26	14.1	3.1	1	23	510	533	510	533	0.97
10	16	0.0011	0.15	14.8	3.0	1	23	935	958	935	958	0.97
11	16	0.0011	0.15	14.8	0.4	2	23	1175	1196	1174	1196	0.97
12	16	0.28	39	7.2	6.3	1	23	1202	1225	1202	1225	0.97
13	16	0.093	13	8.7	1.1	1	20	1254	1274	1254	1275	0.94
14	16	0.19	27	7.7	0.9	1	23	1335	1358	1335	1358	0.96
15	16	0.037	5.2	10.0	0.4	3	23	1405	1425	1403	1425	0.93
16	16	0.017	2.3	11.0	5.9	1	23	1431	1453	1431	1453	0.98

Sequence Information

Coding Sequence: ATGGAGGCATCTCCCTCACCAAATCAAATGGCCAAAGAAAGCTTAGCTAACCGAAGCGACTCAGGCATCTTCTCTGCTACCACCAACACGACAATCGACCACAGCGACTTTTCAAAAAACTCCGAAAATTGCGACACAGACAACAGAAGCGACTGCTCCTCACCAGAAAGAAAATACGTGTGTCCCATCTGTGACAGAATGCTAACATCTCAACATGAATTTACTTTGCATATCAGGTCTCATAATAACGAGAATGAGGTTCAAGACAGCGAAAAAGGCTACACTTGCAGGATATGCCTGAAGGTTTTAAGTTCGAGTAGTAGCCTGGATCGTCACGTACTGGTGCATAGCGGAGAACGTCCATTCCACTGCAAATACTGTGGAGACACTTTCACAACGAATGGCAACATGCACAGGCATATGAGGACTCACTCCCACAAAACTGAAAACAGCTATGAGTCGGACGGGAGCACCGACAGTAATAGTTCGAAGAGTACCGAGTTCAACAACAACAAAGTGGAGAAGTAcaacaacaaaagaaaaaatgaGAACCCGGAGACAACTACTAAGAGACAGCGTGAAAGCTGTAGCGACACAGACACAAGTCAGTCCTTTAAATGTCCTGTGTGCGAGCGAAGCGATTTTAACTCTGTCTCTAACTTAGAAGCACATTTGGAGGATAATCATCCAGACTATCCCGCCAAGTGCAACCAATGCCAGCAGGTTTTCTTAAACAACAAAAAGTTAACAATTCACAAGGCAACTGTTCACGAAAACGTAATTTCTCGACACCCGGTTGTTGGTTTCAAAGATTTGACCTACCTGGATTTTTCTAGCGAAAAATTTCCTCACATAGCTCGAAGAGAGTGTGAAATGAATCTACATAAAGCTTCAGGAGGTTTGAAATTTCAATGCAGGAGATGCAACAGAGCATTTCCCTGTACCAACTCGCTAGAAATACACGAGAAAAGCTGTGTTTTGATAGAATGTGCCAACGGACTGGACCTTAGCACTATATCTCAACCAGAAATAAGGCGCATGGAATTCTTCTCGCGGCTAAACTTGGTGGATAAGTCTCCTGAAAAACAACCATTAGCTATTCAACTTGAAAAAAACCCTAACAAACTTAGAGAGCATCTTGTCAAAGCAATGGACAATACTAAAGATTTAGCTGATATTCAGTCCATCTTGTCCAATATAAATCTGCAGCAGCTGCAAGCCAAGCAGCATGAGTTGCGGCTGCCTCCTAAACCGCTCTCTGAGCAATGTGATTATCAAAAGAATGAGCAGGAGGAAGAATCGCAGGATTTATTTGCCGTGGAATTTAGGAAGATGAAACTGCGAGGCGAGTTTCCCTGCAGACTGTGCACGGCAGTTTTCCCCAACTTGCGCGCACTTAAAGGTCACAATCGCGCTCACCTCAATGGCAACACGAATGGTACTTACTACTGTAACATGTGCCCTCATTCGTCAATCGACAAAGCAGCTCTAATTCGCCACATGCGCACACATAATGGCGACAGACCTTACGAGTGCTCCTTGTGTAATTACGCTTTCACTACCAAAGCCAATTGCGAAAGACATTTGAGAAATAGGCACGCTAAAACTACTAGAGAGGATGTGAAGAAGTCAATAATATACCACCCATCAGAGGACCCCACTAACGAGGACCTAAACAAGTTAACAACCAAAGAGGAACCTAAGAAATTAAGCGTCACTTCGTTTGTAGAAACTAGAGATTTAAGTCCAGAAAAGGTACATTGCTCTACACCGAAAATTCCTGAAATAGTGCGAAACCACGCATCTGAAATAAAATCTGAAATTAACTTACATAAACCAAATATAGCACCGCTAATCCCAGAGCTACCTTTATTGAAACCTACCAAGATAGCTTCTAATATTAATGATATTATTCGTAACGAGAACCTCAGGTCTTTAAAGGAACATAAGCTGATGCACAATGGAGTAGTTCCAATGATTCAGCATAGTTTCGGATATTCACCACAAAAAATTCAAGTGAAGAGTTTGGAAGCATTGAAAGAGAACAATGTATACGATAATGAATCTGAAGAGGAATACATAGAGGAAGATGAGCAGCCCATGGATTTAGTTTTAGATTtaagtaaaaagaaattcaacGAGGACAACAAGCGCATTCCGGAAGACCTGCCGCAAGATTTAACAAAGAAAACACCTCCCCCTCCAAGTCCAGTTGCTACTCAGTTACCTCCGAATATGGGGGAAATATTTGCTCAACAGTTACTGAAGACACCTCCAAAAATCGACCCTGCCGCTTTATACGCTTCCCAATTAGCCCACCTTTACCGAAGCGGCTTCCCTGCCTTATCCAACTGGACTGGTTTTCCTCTCAATCcattactctttcccacattgCCTCCATCTTTACCACAGAATCCACAAGATATTAAAGAACGAATGCAGAGGTTTCAACTGTGCGGTGGGTCCATGATCGCAGAGGATTTGAAAAATTTGCAAAACCTTCAAAGTTTGCAGCACCAGACACTTCGCAGTCCAAATATAAACTACAACGGTTATAAATTAGAACATAAACCTGAGATgaaaatggaaaacaatttttctacTCCAAAGAAACCGGAAGACTTAAAACCTCTGAGCCTGAATGTCGATACTAATTTTAGTGAAAATCTAGCTAAATTACAAAGCCCCATACCTCAAAACAAATCTGACTTAATGCAGTCACCTAACTCCGTAAAAATGGTGATAAAGAATGGTGTTTTGATGCCAAAGCAGAAGCAGAGGCGGTATAGGACCGAGCGGCCGTTTACCTGCGAACATTGCTCGGCCAGATTTACTTTGAGGTCGAATATGGAACGCCATATTAAGCAACAACATCCCCAGTTTTGGTCGCAAAGGCAGAGGGGTAGCGTGGGTAATCCTGGACGGAAAGCTCAAACTTTGCCTGTGAAGTCCAACTATTGTGACCTTAGCATACCTAATTACGAAGCACCAAGGAGTCAAGACTATAACGACAGTAAAGAGCTTTTGAATGAAAAACTTAAATTTGCTATTTTGGCGCAGCAGCTTAGAGCAAACCAAAACGCCAATCTGGAAATGAAAAAGGACGAAGACGAAGACTGCGATCTAGTTATAGATGAAAATGACGAAAAGAACGAACCAAAGACTGAGGAACTCAACCAAAGAAATGATTACGAAAGAAGCAGAATTTTAGAAGAGAAGCTTAAAGAATTGCAACAGTTTAAGACTGAAGCCAAAAATACTAAAAGTGAGGAGAATCAGGATTTGGTACCTGTATCGCGACTTCTGGATAACGCTTCCCAGCAACAATTCAAAGAATATTTTAAGAGGGAGGGAGAGGAACATGAGGTGGGCGGAGTTAGTGAAGAGGATGAAGAGGGTCTGGTGGCAAGCGGGAGCACGAGTGAAGGAAACGTTTCCGGAACAGATGAGAACAGATCTGAATCCGAGACAACTCAACCAGTAAAAAAAAAGTCTGCATACTCGCTGGCTCCAAATCGAGTTAGCTGTCCCTATTGCAGTCGCAAGTTTCCTTGGACCTCTTCCTTACGCAGGCATATTCTCACACATACCGGGCAAAAACCTTTCAAGTGCAGCCACTGTCCGCTTCTCTTCACTACCAAATCCAACTGTGACCGCCATTTACTGCGCAAGCACGGTAACGCGGCCACTACGATCAGCAACGATGCCAGTAATAACAACAACGCCAACTACTTGATGCGAAACGTCCCAGAGCGACCTTTTAAGTGCTCTAGTTGTCCAAGCAGCACATTCTCGACATactccaatttaaaaaaacatattagcTGCAAACATTCCACCAACGCCCAAGGGGACGACATTAAAGCTCAGGGGTACGAGGCGGGCAGCTCTGAGGATGAGAAAATTCCAAATTTCGAAACTAAGAATGACTGGGAAACTCAGTTGGCCTACAGCAAGTTAAACGTAGACCAATCGCAGACAGTACAAAACTCTGATCTACCATTCAAGTGTCATCTATGTGAAGGATCTTTTTCAGAAAGGCAAGATGCCTTAGATCACATTCGTGACAGACATGCTTCCGAGTACGATTTGCTCATGTCAAAGAATGCCTTGGACAGCAATGCTACTACCCCTGACGACGCGTCTCATCAAGAAGATGATGAGAGCGAGATCCGTGGGAAATTTCCAGATTACTCCAATCGAAAAGTTATTTGTGCCTTTTGTATGCGCAGATTTTGGTCTGCGGAGGACTTAAGACGTCATATGCGTACGCACACTGGCGAACGACCTTTTAGCTGCGACATATGCCGTCGTAGATTTACTTTGAAACATAGTATGCTGCGACATAGAAAAAAACACaatgtcaattttgaaaatgAGAACATCAATAGTGACGAAGACGGAAATAATATTTCCCCGGTATATGACAAGTATGTTAAAGGCGAAAATAATAACTCTATGCAAAAGGGTGTCGAGAAAACTGATGAATCAGATTGTACTGAGGGAGGAGATTTAATAAGTAACCTCTTAGGGTTAAGGGACAGATCTATTATCGATAAGGTCTTGGCAGCTTCGGCAGACGATGCTGCCAAACTCTTAGGGGTTAAAAACGGGGTTAGGGAAtag
Protein Sequence: MEASPSPNQMAKESLANRSDSGIFSATTNTTIDHSDFSKNSENCDTDNRSDCSSPERKYVCPICDRMLTSQHEFTLHIRSHNNENEVQDSEKGYTCRICLKVLSSSSSLDRHVLVHSGERPFHCKYCGDTFTTNGNMHRHMRTHSHKTENSYESDGSTDSNSSKSTEFNNNKVEKYNNKRKNENPETTTKRQRESCSDTDTSQSFKCPVCERSDFNSVSNLEAHLEDNHPDYPAKCNQCQQVFLNNKKLTIHKATVHENVISRHPVVGFKDLTYLDFSSEKFPHIARRECEMNLHKASGGLKFQCRRCNRAFPCTNSLEIHEKSCVLIECANGLDLSTISQPEIRRMEFFSRLNLVDKSPEKQPLAIQLEKNPNKLREHLVKAMDNTKDLADIQSILSNINLQQLQAKQHELRLPPKPLSEQCDYQKNEQEEESQDLFAVEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNTNGTYYCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREDVKKSIIYHPSEDPTNEDLNKLTTKEEPKKLSVTSFVETRDLSPEKVHCSTPKIPEIVRNHASEIKSEINLHKPNIAPLIPELPLLKPTKIASNINDIIRNENLRSLKEHKLMHNGVVPMIQHSFGYSPQKIQVKSLEALKENNVYDNESEEEYIEEDEQPMDLVLDLSKKKFNEDNKRIPEDLPQDLTKKTPPPPSPVATQLPPNMGEIFAQQLLKTPPKIDPAALYASQLAHLYRSGFPALSNWTGFPLNPLLFPTLPPSLPQNPQDIKERMQRFQLCGGSMIAEDLKNLQNLQSLQHQTLRSPNINYNGYKLEHKPEMKMENNFSTPKKPEDLKPLSLNVDTNFSENLAKLQSPIPQNKSDLMQSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGSVGNPGRKAQTLPVKSNYCDLSIPNYEAPRSQDYNDSKELLNEKLKFAILAQQLRANQNANLEMKKDEDEDCDLVIDENDEKNEPKTEELNQRNDYERSRILEEKLKELQQFKTEAKNTKSEENQDLVPVSRLLDNASQQQFKEYFKREGEEHEVGGVSEEDEEGLVASGSTSEGNVSGTDENRSESETTQPVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNAATTISNDASNNNNANYLMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKIPNFETKNDWETQLAYSKLNVDQSQTVQNSDLPFKCHLCEGSFSERQDALDHIRDRHASEYDLLMSKNALDSNATTPDDASHQEDDESEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVNFENENINSDEDGNNISPVYDKYVKGENNNSMQKGVEKTDESDCTEGGDLISNLLGLRDRSIIDKVLAASADDAAKLLGVKNGVRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01227639;
90% Identity: iTF_00886792; iTF_01290705;
80% Identity: -