Scau004650.1
Basic Information
- Insect
- Stenodera caucasica
- Gene Symbol
- tfip11
- Assembly
- GCA_037414795.1
- Location
- JAZBGZ010000440.1:11168-14316[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-95 2.5e-91 305.8 14.7 3 275 396 673 394 673 0.95 2 2 0.16 1.1e+03 -1.4 0.1 158 187 686 714 677 723 0.50
Sequence Information
- Coding Sequence
- atgtcagatgaagaaatggaaaaattcgaaatatctGATTATGATTTAGATAATGAATTTTATCGtagtcgaaaaaaattaactaaacATCAACAGATTTATGgtatatgggctgatgatagtgataatgatgatgatggtgataatCGTTCATCATTTAAaacgaataaaaacaaaaattatacaacacCAATTGGTTTCGTTGCTGGTGGTGTCCAACAAGCTGgcaaaaaagataaaaaagaaaacgaaaataacGATGAAGATGCAACCAATGAATCTGATGATGAAAAACCGACAACTTCGTTCAAAACCAGAAATAGTTCGAGCGAATCAGATGAAGAAGCACCACGATTAGGTTTCGGCTcattgaaatcgaaaaatcaaccGACAGTCACAGAAATTACAGCCGATATAGCCGGATTACGTACAAAACGTAATTTATCTAGtggaaatttaataaatagtgGTGTTGGTGGTTGGGAGAAACACACAAAAGGAATCGGtgcgaaattattattgcaaatgGGCTTCCAACCCGGTAGAGGTTTAGGGAAAGATCTGCAAGGTATATCGGCACCTGTTGAGGCGCATTTGCGTAAAGGACGTGGCGCTATTGGAGCTTATGGTCCAGAAAAGAGTGCTACTATACCAAAAATTAAGGAAATCAAAGAGGAGATTGATTATGAGGATAATGGTGATGAGCGTGACAAATCGAAGAAGAAAACGCGATATTATTATAGAAGTGTTGATGATGTTATCGAGAAAGGTAAACGACCTGGCAATCTCCGAAATTCGACACCATCCAGTGACTTAAGTAAAGTGAAAGTGATCGATATGACTGGGCCTCAACAACGAATCCTAAGCGGTTATCATGCATTAAGCGGTCTAAAAGCACCACCAGGTGTTGAACATTATGAAGATGTCATCCATAAGAAATgctcaaatttttcattacCAGAAATACAGCataatttagatattttagTCGATATGTGTGAACaagatattatcaaaattgatcgtgATACACGATACAATCACGATAGAATTATTACATTGAAGCAAGAACAagagaattcaattaaaattcttgaaaaagaGGAgatattgatcaaaaatttgaaaaatgttatGGATtatgttgataaattattagatcCATCATTGGGTCTATCTCTATTTCAAATTGCTCAAATTTTCAGAGAATTACAagggaatcattttgatgaatatttacgTTATGAATTAGGCGAATTGGCTCCAGGTCTTGTTGGTCCATTATTAACATCAGCATTAGCTAGTTGGTCACCATTAAATTTACCAAATCAATATATTGATGTATTTAAACAATGGAAGGATATTTTGGATaaaccaaaacaacaacaacaacaacaacaatatcaacgtGGGACACTAGAAGGTAATAATATGGGAATACAGCCATATGATAGTCTCTTATGGCATAATTGGATGCCTGTTATGAGAATTTGTGTTAGTTCTTGGAATCCACGTGATTGTGATCCTTTAATAACATTAATTGAAACATGGCTACCATTATTACCACAATGGATCGTTGATAATTGTTATGATCAATTAATATTGCCACGTATACGTAGTGAAGTTGATGCATGGAACCCATTAACAGATACTGTACCAATACATATATGGATACATCCATGGATACcattaataaatgataaactacataaaataatttatccaATAATACAAGATAAATTAGGTGTTGCATTAACTAATTGGCATCCATCAGATCCATCAGCTAAACCAATGTTGAAACCATGGCAAAGAGTCCTACCAGATGGTACATTTTTAgcgtttttattgaaacatattgtaccaaaattacaattatgtaTGCaacaatttgttataaatcCACATCAACAACATCTCGaACCGTGGCATTGGGTGATGGATTGGAACGATATGTTATCAGTTGGAAATATGACACTAATTTTAGACAAATTCTTCTTCCCCAAATGGCTTCAAACGCTAGCAATGTGGCTAAATCACAATCCTAATTATACACAAGTAACTGAATGGTATTCGGGATGGAAAAATATGCTTCCAGAAGAAATATTAATGCAGCCTACAATTAAAGaaaatttccataatgcCTTGGAGATGATGAGTAGAGCGGTGAATTTCGGCCAACAACCCGGCGCTAAAGAATCAATTTCCTATTTGAATAGTATGGAAAATAATGCGAAACCgacaccaccgccaccaccaccaccaaaaGTTGACAGTTTTGCCGAAACTGTACAttcattatcgaaaattccacCTCTATACAAGGATTTGGTTGCGAAACGTTGTGAAGAACGCGGTATACTTTTTGTACCAATaccaaataaatattatgaaGCTAAACAAGTTTATCGTATCGGTACAAATGGTCTTCAATGTTATATTGATAggaatgtaattttttcatcgcataacaatttgaattggGCACCAACTTCATTGAATCGTCTACTCGATATGGCGTAA
- Protein Sequence
- MSDEEMEKFEISDYDLDNEFYRSRKKLTKHQQIYGIWADDSDNDDDGDNRSSFKTNKNKNYTTPIGFVAGGVQQAGKKDKKENENNDEDATNESDDEKPTTSFKTRNSSSESDEEAPRLGFGSLKSKNQPTVTEITADIAGLRTKRNLSSGNLINSGVGGWEKHTKGIGAKLLLQMGFQPGRGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKSATIPKIKEIKEEIDYEDNGDERDKSKKKTRYYYRSVDDVIEKGKRPGNLRNSTPSSDLSKVKVIDMTGPQQRILSGYHALSGLKAPPGVEHYEDVIHKKCSNFSLPEIQHNLDILVDMCEQDIIKIDRDTRYNHDRIITLKQEQENSIKILEKEEILIKNLKNVMDYVDKLLDPSLGLSLFQIAQIFRELQGNHFDEYLRYELGELAPGLVGPLLTSALASWSPLNLPNQYIDVFKQWKDILDKPKQQQQQQQYQRGTLEGNNMGIQPYDSLLWHNWMPVMRICVSSWNPRDCDPLITLIETWLPLLPQWIVDNCYDQLILPRIRSEVDAWNPLTDTVPIHIWIHPWIPLINDKLHKIIYPIIQDKLGVALTNWHPSDPSAKPMLKPWQRVLPDGTFLAFLLKHIVPKLQLCMQQFVINPHQQHLEPWHWVMDWNDMLSVGNMTLILDKFFFPKWLQTLAMWLNHNPNYTQVTEWYSGWKNMLPEEILMQPTIKENFHNALEMMSRAVNFGQQPGAKESISYLNSMENNAKPTPPPPPPPKVDSFAETVHSLSKIPPLYKDLVAKRCEERGILFVPIPNKYYEAKQVYRIGTNGLQCYIDRNVIFSSHNNLNWAPTSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00814402; iTF_00987124; iTF_00841845; iTF_00929571;
- 90% Identity
- -
- 80% Identity
- -