Ltri004222.1
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- tfip11
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010000528.1:1-4564[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-94 1.9e-90 302.9 19.9 2 275 414 694 413 694 0.96 2 2 0.1 7.2e+02 -0.8 0.3 242 270 706 734 697 739 0.73
Sequence Information
- Coding Sequence
- atgtCCGATGAGGAAAtggaaaaattcgaaatatccgattatgatttaaataatgaattttatcgtaatcgaaaaaaattaactaaacaTCAACAGATTTATggtatatgggctgatgatagtgataatgatgatgatgatgatgatgatagtaataatcgtacatcatcatttaaaacgagaaaaaataaaaattatgcagCACCAATTGGTTTTGTTGCTGGTGGTATACAACAAGCTGGcaaaaaagataataaaacgAAAGATGAAAATcttaaagaagaaataaacGAATCTGATAATGAGAAACCTACaacatcatttaaaataaaaaatagttcTAGTGATGAATCAGAAGAAGATACACCACGATTAGgATTTGGTGCTTccacaacaaaatcaaaattaacaacaacacaatcaacAGTAACAGAAATCACAGCCGATATAGCTGGATTACGTACGACAAAacgtaattattcaaataaaaatttggtaaatagTGGTGTTGGTGGTTGGGAGAAACATACAAAAGGTATTGgtgctaaattattattacaaatggGCTATCAACCTGGTAAAGGTTTGGGTAAAGATCTACAAGGTATATCAGCACCAGTTGAGGCACATTTACGTAAAGGACGTGGTGCTATTGGTGCTTATGgtccagaaaaaaaaacatctatctcaaaattaaaagatacaattgatgataataataaagaatttattgatgattatgataatgatgatgatgatgataatagaacGAAAAAGAAGACACGCTATTATTATAGAAGTGTAGATGATGTTATTGAGAAAGGTAAACAACGGCCgggcaattatcaaaatttaggAGCGTCAAGtgAATTGAGTAAAGTGAAAGTGATCGATATGACTGGTCCACAACAGAGGGTTTTAAGTGGTTATCATGCTTTAAGTGGTTTAAAAGCACCACCAGGTGTTGAACATTATGAAGATGTTATACATAAGAAAtgttcaaatttttcattaccagaaattcaacataatttaGATATTTTAGTGGATATGTGTGAACaagatattattaaaattgatcatGATACACGTTATAATCATgatagaattgttttattaaaacaagaacatgatatattgaaaaatacgaTTAATAAAGAggagattttaattaaaaatttacaaaatatcatgagatatgttgataaattattagatcCATCATTAGGTTTATCATTAATGCAAGTTGcacaaatttttaaagaattacagGAGAATCATTTTGAAGAATACGTACGTTATGAATTGGGTGAATTGGCGCCAGGTCTTGTTGGTCCATTATTAACATCAGCATTAGCTAGTTGGTCACCATTAACATCACCAAATCAATATAccaatatatttaaacaatggAAGGTTATATTAGAGAAGccaaaacaacatcaacaacaacaacaacaacaacaacaacgtggGACAATAGAAGGTAATAATATGGGAATTCAGCCATATGATAGTCTCTTATGGCATACTTGGATGCCTGTTATGAGAATTTGTGTTAGtACATGGAATCCACGTGATTGTGATccattaataacattaattgaaacatGGTTAACATTATTACCACAATGGataattgatcaattatttgatcaattaataataccaCGTATACGTAATGAAGTAAATGAATGGAATCCATTAATTGATACAATACCAATACATATATGGATACATCCATGGATAccattaataaatgataaattacataatattATTTATCCAATAATACAAGATAAATTAGGTGTTGCATTAAATAATTGGCATCCATCTGATCAATCAgcaaaattaatgttaaaaccATGGCAACGTGTATTACCAGATGGTACATTTTtagcatttttattaaaacatattgtaccaaaattacaattatgtatgcaacaatttgttataaatccacatcaacaacatctaGaacCATGGCATTGGGTGATGAATTGGAGTGATATGTTATCAGTAGGAAATATGACATTAATTTTAGACAAATTCTTCTTCCCGAAATGGTTACAAACTTTAGCAATGTGGTTGAATCACAATCCAAATTATACACAAGTGACTGAATGGTATTCAGGTTGGAAGAGTATGATACCAGATGAGTTACTAATGCAACCAACGATTAAAGaACATTTCAATAATGCATTAGAAATGATGAGTAGAACTGTTAGTTTTGGACAACAACCAGGTGCTAAAGAATCAATATCGTATTTGAGTAGTATGGAGAATAATGCACCATTACAACCACCATtaccgccgccaccaccaccaccacccataacaacaacaacaacaacagtagaaAGTTTTGCTGAAACTGTACGTTCATTATCGAAAATACCACCATTATATAAAGATTTAGTAGCAAAACGTTGTGAAGAACGTGGTATACTTTTTGTACCAAtaccaaataaatattatgaaGCTAAACAAGTTTATCGTATTGGTACAAATGGTCTTCAATGTTATATTGATAGAAATGTGATATTTTCATCACAGAATCAATCGAATTGGGTGCCAACATCATTAAATC
- Protein Sequence
- MSDEEMEKFEISDYDLNNEFYRNRKKLTKHQQIYGIWADDSDNDDDDDDDSNNRTSSFKTRKNKNYAAPIGFVAGGIQQAGKKDNKTKDENLKEEINESDNEKPTTSFKIKNSSSDESEEDTPRLGFGASTTKSKLTTTQSTVTEITADIAGLRTTKRNYSNKNLVNSGVGGWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKKTSISKLKDTIDDNNKEFIDDYDNDDDDDNRTKKKTRYYYRSVDDVIEKGKQRPGNYQNLGASSELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHYEDVIHKKCSNFSLPEIQHNLDILVDMCEQDIIKIDHDTRYNHDRIVLLKQEHDILKNTINKEEILIKNLQNIMRYVDKLLDPSLGLSLMQVAQIFKELQENHFEEYVRYELGELAPGLVGPLLTSALASWSPLTSPNQYTNIFKQWKVILEKPKQHQQQQQQQQQRGTIEGNNMGIQPYDSLLWHTWMPVMRICVSTWNPRDCDPLITLIETWLTLLPQWIIDQLFDQLIIPRIRNEVNEWNPLIDTIPIHIWIHPWIPLINDKLHNIIYPIIQDKLGVALNNWHPSDQSAKLMLKPWQRVLPDGTFLAFLLKHIVPKLQLCMQQFVINPHQQHLEPWHWVMNWSDMLSVGNMTLILDKFFFPKWLQTLAMWLNHNPNYTQVTEWYSGWKSMIPDELLMQPTIKEHFNNALEMMSRTVSFGQQPGAKESISYLSSMENNAPLQPPLPPPPPPPPITTTTTTVESFAETVRSLSKIPPLYKDLVAKRCEERGILFVPIPNKYYEAKQVYRIGTNGLQCYIDRNVIFSSQNQSNWVPTSLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01366327;
- 90% Identity
- -
- 80% Identity
- -