Ipal005980.1
Basic Information
- Insect
- Iselma pallidipennis
- Gene Symbol
- tfip11
- Assembly
- GCA_037464855.1
- Location
- JAZBHA010000512.1:17140-20366[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-95 5.1e-92 308.0 16.2 2 275 405 685 404 685 0.96 2 2 0.42 2e+03 -2.2 0.1 242 268 697 723 689 731 0.59
Sequence Information
- Coding Sequence
- ATGTCCGAtgaagaaatggaaaaattcgaaatctccgattatgatttaaataatgaattttatcgtagtcgaaaaaaattaactaaacatCAACAGATTTATGgtatatgggctgatgatagtgataatgatgatgatgataatgatggtgataaGCGTTCATCATCGTATAGAACGAAGAAACCAAATAGTTATTCAGCACCAATTGGTTTCGTTGCTGGTGGTATTCAACAAGCTGGCAAAAAAGATAAAGACAATAACAAACCGGAAGAGGAGACCAACGAATCTGATACCGACAAACCAACAACATCTTTTAAAACACGAGATAGTTCCAGTGAATCAGAAGACGATACACCACGACTAGGTTTTGGTGCATTAAAATCCAAAACTCAATCAACCGTTACAGAAATCACCGGCGATATAGCTGGATTACGTTCAAAACGTAACTATCCTAGTGCAAACTTAGTAAATAGCGGTGTTGGAAATTGGGAGAAACATACAAAAGGTATTGGTGCcaaattattgttacaaatgGGTTTTCAACCTGGTAAAGGTTTGGGCAAAGACCTGCAAGGTATACAAGCACCAGTCGAGGCACATTTACGTAAAGGACGTGGTGCAATCGGTGCTTATGGTCCGGAAAAAGCTGCTTCAATAgcgaaaaagaaagaaatcaaAGATGAAATCATCGATATTGATAATGAGGAACGTGATAGTGCTAAATGGAAAAAGAATGATGGAtcaatgaaaaagaaaactcGATATTATTATAGGAGTGTTGATGATGTTATTGAAAAGGGTAAACGACCAGGCAATAATCGGAATTTAGGACCGTCGAGtgAACTTAGTAAAGTTAAAGTGATCGATATGACTGGCCCTCAACAGAGAATTCTAAGTGGTTATCATGCTTTAAGTGGTCTGAAAGCACCACCAGGTGTTGAACATTATGAAGATGTTGTCCATaagaaatgttcaaatttttcattaccAGAAATCCAACATAATTTAGATCTTTTAGTTGATATGTGTGAACAAGATATTATACGAATTGATCGTGATACAAGATATAAACAAGATAGGATTGTTACATTGAAACAGGAACAAGACACTTTAAAAAACACATTGGAAAAGGAGGagatattaattgaaaatttacaaaacgtTATGGAatatgttgataaattattggatCCATCATTGGGTTTATCTTTACTGCAGGTTGCTCAAATTTTCCGTGAATTACAGGACAAACATTATGAAGAATATATACGTTATGAATTAGGTGAATTGGCTCCAGGTCTTGTTGGTCCATTATTAACATCAGCACTAGCTAGTTGGTCACCGTTAAATGCCCCAAAACAATATATTGATGTATTCAAACAATGGATGGATATTTTGGATAAGTCtaaacaactacaacaacaccaacaccaacaatacCAACGTGGGACACTTGAAGGTAATAATATGGGGATACAGCCATATGATAGTCTCTTATGGCATACTTGGATGCCTGTTATGAGAATTTGTGTTAGTTCATGGAATCCACGTGATTGTGATCCATTGATAACATTAATTGAAACCTGGATGCCATTATTACCACAAtggataattgataattgttataatcaattaatattaccACGTATACGTGTTGAAGTGGATGCATGGAATCCATTAACAGATACAGTACCAATACATGTATGGATCCATCCATGGATaccattattaaatgataaattacaaacaataatcTATCCAATAATACAAGATAAATTGGGTGCAGCATTAGCTAATTGGCATCCATCCGATCCATCAGCTAAACCGATGTTGAAACCATGGCAAAGAGTACTACCAGATGGTACATTTTTAGCATTTCTACTTAAACATATTGTACCGAAATTACAAATATGTATGCaacaatttgttataaatccacatcaacaacatttagATGCTTGGCATTGGGTGATGGATTGGAATGATATGTTATCAGTTGGAAATATGAcattaattttagataaattctTCTTTCCGAAATGGTTACAAACTCTAGCTATGTGGTTGAATCATAATCCCAATTATACACAAGTGACCGAATGGTATTCCGGATGGAAAAGGATGTTTTCGGATGAATTATTAACCCAACCgacaattaaagaaaatttccataatgcACTAGAAATGATGAGTAGAGCTGTTAGTTTCGGCCAACAACCAGGTGCTAAAGAATCAATCTCGTATTTGAGTAGTATGGAGAGTAATCCactacaaccaccaccaccgccaccgccgccACTATCATCACAACAACCACCATCACATAGAGTTGACAGTTTTGCAGAAACTGTTCGTTCACTTTCAAAAATACCACCATTATATAAGGATTTAGTAGCGAAACGTTGTGAAGAACGTGGTATTCTTTTTGTACCGATACCAAATAAGTACCATGAAGCTAAACAAGTCTATCGTATTGGTACAAATGGTCTACAATGTTATATTGATAGAAATGTTATTTTCTCATCACAAACTAATTCCAATTGGGCACCAACATCATTGAATCGTCTACTCGATATGGCGTAA
- Protein Sequence
- MSDEEMEKFEISDYDLNNEFYRSRKKLTKHQQIYGIWADDSDNDDDDNDGDKRSSSYRTKKPNSYSAPIGFVAGGIQQAGKKDKDNNKPEEETNESDTDKPTTSFKTRDSSSESEDDTPRLGFGALKSKTQSTVTEITGDIAGLRSKRNYPSANLVNSGVGNWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGIQAPVEAHLRKGRGAIGAYGPEKAASIAKKKEIKDEIIDIDNEERDSAKWKKNDGSMKKKTRYYYRSVDDVIEKGKRPGNNRNLGPSSELSKVKVIDMTGPQQRILSGYHALSGLKAPPGVEHYEDVVHKKCSNFSLPEIQHNLDLLVDMCEQDIIRIDRDTRYKQDRIVTLKQEQDTLKNTLEKEEILIENLQNVMEYVDKLLDPSLGLSLLQVAQIFRELQDKHYEEYIRYELGELAPGLVGPLLTSALASWSPLNAPKQYIDVFKQWMDILDKSKQLQQHQHQQYQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSSWNPRDCDPLITLIETWMPLLPQWIIDNCYNQLILPRIRVEVDAWNPLTDTVPIHVWIHPWIPLLNDKLQTIIYPIIQDKLGAALANWHPSDPSAKPMLKPWQRVLPDGTFLAFLLKHIVPKLQICMQQFVINPHQQHLDAWHWVMDWNDMLSVGNMTLILDKFFFPKWLQTLAMWLNHNPNYTQVTEWYSGWKRMFSDELLTQPTIKENFHNALEMMSRAVSFGQQPGAKESISYLSSMESNPLQPPPPPPPPLSSQQPPSHRVDSFAETVRSLSKIPPLYKDLVAKRCEERGILFVPIPNKYHEAKQVYRIGTNGLQCYIDRNVIFSSQTNSNWAPTSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01366327;
- 90% Identity
- -
- 80% Identity
- -