Scau008692.1
Basic Information
- Insect
- Stenodera caucasica
- Gene Symbol
- retn
- Assembly
- GCA_037414795.1
- Location
- JAZBGZ010001381.1:1-9253[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-19 5.4e-16 58.5 0.0 18 89 1 70 1 70 0.94
Sequence Information
- Coding Sequence
- ACACCAATTAATCGACTCCCAATTATGGCCAAATCCGTTCTCGATCTCTACGAATTGTACAATTTGGTGATAGCTCGTGGTGGATTGGTGGATGTTATCAACAAGAAATTGTGGCAGGAGATCATCAAAGGGCTACATTTACCATCATCGATTACTTCAGCCGCTTTCACATTAAGAACACAAtacatgaaatatttatatccGTACGAGTGCGAAAAACGCCGCTTGAGCACACCAGCTGAACTCCAGGCCGCCATCGATGGTAATCGTCGCGAAGGCCGTCGCAGCAGTTATGGTCAATATGACTCGATGCAGCGCTCCCCGAACCCATCGCAAATGTCCCCATTATCGCTGGTatcccaacaacaacagcaacaattgGCCGCCCGTATGAATTCGATGATGAGCGGCGGCATCGGCCTCCATAACGGCGCCCATCATCCCAGCCATCCGCAACCATTGAGCCAACCGCTCAACGGCGGCCCCATACCCGGTTTAGCGCCGAACGAATTCGAGGCGCGCATGTTGGAATAcgtgaaattattgaacaaagaaTTCCGGCACAATACCGGCACACCGCCGGGCCAAGGTCCAGGCGGCGATATCACCCCACCGAACACCACCACATCGCCATTGAATCCATTGGAAATGTCCCGGATGACTTTATGGAATCTGTACAATAATAACCAGACGCCGGTCGAACCGCAAAAGGAGGCGTTGAATTTGGCCGATGCGGCCCAAACGTCGACGAAACGGGAGGCCGAAAGTCGAGGGGAGTCGCCGCCGCCGCCGAAAAAGTTCTCCAAAGACGACAGTAACGATGTCAAAATGATCTCGCCCAATTCTGCACACATCAAAATCAACAGTCGAGGGGATGTCCGCAATGGTGACAGTAACTCATTGGTGGTTAGTATGGAGTTGAACGGAATCACTTATCAAGGTGTGCTCTTTGCCCAAACATCGCCATCTAGCGGCAGGACTGCAATAGCTTCGTAA
- Protein Sequence
- TPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYDSMQRSPNPSQMSPLSLVSQQQQQQLAARMNSMMSGGIGLHNGAHHPSHPQPLSQPLNGGPIPGLAPNEFEARMLEYVKLLNKEFRHNTGTPPGQGPGGDITPPNTTTSPLNPLEMSRMTLWNLYNNNQTPVEPQKEALNLADAAQTSTKREAESRGESPPPPKKFSKDDSNDVKMISPNSAHIKINSRGDVRNGDSNSLVVSMELNGITYQGVLFAQTSPSSGRTAIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480641;
- 90% Identity
- iTF_00929355; iTF_01566034; iTF_00841629;
- 80% Identity
- -