Ipal003434.1
Basic Information
- Insect
- Iselma pallidipennis
- Gene Symbol
- retn
- Assembly
- GCA_037464855.1
- Location
- JAZBHA010000226.1:35200-38263[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-17 5.4e-14 52.0 0.1 29 89 4 62 1 62 0.93
Sequence Information
- Coding Sequence
- ATGGCTAAATCTGTGCTTGATCTCTACGAATTATATAATTTGGTAATAGCTCGTGGTGGATTAGTTGATGTTATCAATAAGAAACTTTGGCAAGAGATCATCAAAGGATTACATTTGCCATCATCGATTACCTCGGCAGCTTTCACATTAAGGACACAatatatgaaatatttatatccaTATGAATGCGAAAAACGTCGCTTGAGCACACCAGCTGAACTACAAGCAGCCATTGATGGTAATCGTCGAGAAGGCCGCCGTAGTAGTTATGGTCAATATGATTCAATGCAACGTTCACCAAATCCATCGCAAATGTCACCATTATCTTTAGtatcccaacaacaacagcaacaactaGCTGCCCGTATGAATTCAATGATGAGTGGTGGTCTTGGTTTACATAATGGTGCACACCATCCCAGTCATCCACAACCATTAGGCCAACCATTAAATGGTGGTCCAGTACCGGGCTTAGCACCAAATGAATTTGAAGCACGTATGTTAGaatatgtaaaattgttgaataaagaATTCCGACATAATTCTGGTACACCAcccagtggtggtggtggtggtggtggtggacaaGGTGGTGATATAACACCACCAAATACCACATCACCATTAAATCCATTAGAAATGTCCAGAATGACATTATggaatttatataataataatcagacaCCCGTTGAGCCACAGAAGGAGGCATTAAATTTAGCTGATGCAACACAGACTTCAATGAAACGGGAAGCTGAAAGTAGAGAATCACCACCGCCGCCAAAAAAATTCTCCAAAGATGACAGTAATGACGTAACGAAAGTGATCTCACCCAATTCAACACACATCAAAATCAACAGTCGAGggGATGCCCGTAATGGTGATAGTAACTCGTTGGTGGTTAGCATGGAATTGAATGGTATCACTTATCAGGGTGTACTATTCGCTCAGACATCGCCATCTAGTGGCAGGACTGCAATAGCCTCTTAA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYDSMQRSPNPSQMSPLSLVSQQQQQQLAARMNSMMSGGLGLHNGAHHPSHPQPLGQPLNGGPVPGLAPNEFEARMLEYVKLLNKEFRHNSGTPPSGGGGGGGGQGGDITPPNTTSPLNPLEMSRMTLWNLYNNNQTPVEPQKEALNLADATQTSMKREAESRESPPPPKKFSKDDSNDVTKVISPNSTHIKINSRGDARNGDSNSLVVSMELNGITYQGVLFAQTSPSSGRTAIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480641;
- 90% Identity
- iTF_01366125;
- 80% Identity
- -