Ltri001245.1
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- retn
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010000101.1:66180-69178[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-19 1.9e-16 59.9 0.0 17 89 3 73 1 73 0.94
Sequence Information
- Coding Sequence
- ATGACAAGTACACCAATCAATCGACTACCAATTATGGCAAAATCCGTACTTGATCTCTATGAATTATACAATTTGGTGATAGCGCGTGGTGGTTTAGTGGATGTTATCAATAAGAAATTATGGCAGGAAATTATCAAAGGATTACATTTACCATCATCGATTACTTCAGCTGCTTTCACATTAAGAACACAATATATGAAATATCTGTATCCGTACGAATGTGAAAAGCGTCGTTTAAGTACACCAGCTGAATTACAAGCAGCCATTGATGGTAATCGTCGTGAAGGACGTCGTAGTAGTTATGGTCAATATGATACAATGCAACGTTCACCAAATCCATCACAAATGTCACCATTATCATTAgtatcacaacaacaacaacaattagctGCACGTATGATGAGTGGTGGTATTGGTTTACATAATGGTGCCCATCATCCCAGTCATCCACAACCATTAGGACAACAATTAAACGGTGGTCCATTACCTGGTTTAGCACCAAATGAATTTGAAGCACGTATGTTGGAATatgtgaaattattaaataaagaatttcGACATAATACATCTGGCACACCACCGGGTAGTGGTACTAGTGGACAAGATGATTTAACACCACCAAATACAACATCACCAATGAATCCATTAGAAATGTCTAGAATGACATTAtggaatttatataataatcaaGCACCACCACCAGTTGAACCACAAAAAGAAGCATTAAATCTCGCTGATGCtgtacaaaattcaacaaaacgtGATGCTGAAAGTAGAGGAGAAACACCACCGCCACcaaagaaattcaataaagaGGATAGTGATGATGTGACAAAAACGATCTCACCTAATTCAACACACATCAAAATCAACAGTCGAGGGGATGTCCGTAATGGTGATAGTAATTCGTTGGTAGTTAGTATGGAATTGAACGGTATCACCTACCAAGGTGTATTGTTCGCTCAAACATCGCCATCTAGTAGCAGAACTGCAATAACTTCTTAA
- Protein Sequence
- MTSTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYDTMQRSPNPSQMSPLSLVSQQQQQLAARMMSGGIGLHNGAHHPSHPQPLGQQLNGGPLPGLAPNEFEARMLEYVKLLNKEFRHNTSGTPPGSGTSGQDDLTPPNTTSPMNPLEMSRMTLWNLYNNQAPPPVEPQKEALNLADAVQNSTKRDAESRGETPPPPKKFNKEDSDDVTKTISPNSTHIKINSRGDVRNGDSNSLVVSMELNGITYQGVLFAQTSPSSSRTAITS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480641;
- 90% Identity
- iTF_01366125;
- 80% Identity
- -