Spin025328.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sphinx pinastri
Gene Symbol
clz9
Assembly
GCA_947568825.1
Location
OX387624.1:6051991-6054705[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-08 1.6e-05 25.1 0.0 1 35 8 41 8 47 0.89

Sequence Information

Coding Sequence
ATGGCACCAAGAAAAGACTACACAAAAGAACAAATGGCCAAGGCTATCGAAGAAGTAAGAAAAGGAGAGAAAATATCTGTTGCCGCTACAAGATACGGAGTCCCAAGGATAACTTTACATAATAAAATCACCGGGAAAAGTCCTATTGATTGTAATCTAGGTCCAGCCACTGTACTTACATATGAGGAAGAAAGGATACTCGTGAGATGGATAGCCTTTATGGCTGAAAAACACTTCCCTGTGACCAAAGAACAATTGCTTGATAGTGTCCAAAAAATAATATCTGAGAAAAAATTAGATTCCTGTCCGTTCACAAACAATCGGCCAGGAAAAAAGTGGTACTCTTCATTTTTAAAAAGGCATCCAGATCTCTCTGAACGCACAGCGCAAAATTTAAGTAAATCGAGAGATGAAGTCACAGAAGATGACATACTCCGTTGGTTTGAAGTAATTAAAGGTTACCTTAAAAATAAAGACTTGCTTGAAGTAATAAATGACCCTGAAAGAATTTTTAATACTGATGAAAGCGCATTCTACTTACAACCAAAAGCTGGTCGAGTCATAGTGCGCAAAGGTGAAAAAAATGTCTATACAGCATCAGGAGATGAGAAAGAAAATTTAACTGTGTTGGTTACTGGTAATGCTGCTGGAGTTTTAGCTCCACCAATGATAGTATACCCTTATGAGCGTTTACCTGCCGTAATTGCTAATAGCGTACCAAAAGATTGGTGCATAGGTAGGTCAGATTCAGGCTGGATGTGTGCTAGAACTTTTTATGAATATATTACTAATGTGTTCAATCCATGGATAGAAAAAAATAATATACCTAAACCAGTTATATTATTCTTGGACGGTCATAGGTCACATATGACCCTCCATTTATCAGATTTTTGTAAAGATAATGGGATTGAAGTTATCTCTCTATACCCTAACTCGACACATCTACTTCAGCCGATGGATGTTGCAGTCTTTAGGCCTTTAAAGGTATCGTGGCAGAATCAAGTGAAGAGTTGGAAAATGGAAAATCCGAAACAAACAATGAAAAGAGAGCATTTTGCTCCAAACTTTGAGGCAGCTTTGCGAAACATTGCCACAGATACAATAAGAAACGGATTTCGAAAAAGTGGGCTATTTCCCTTTGGTCCAGAATACGTCGACATGAACAAAATAAGTTCACAAAATCGTGCTACAGTTTCCACATCAGCATTAGAAAAAAAAATTGACACGACAAAACAGTTTATGAATACCTTGGAATCAGAAATACGAAGCTTGTTTACAAATGAAAAATTGAATTTATTCAACAGGCTGTACTATATACCCAGAGCTAACGTTGAGAACCTGCTTCCGAATGAAGATCTGTCGTTATATGTCATTTGGGCTAAAACTAAACACTATTTGAATGAAAATTTGCCTCAGAGAGTTGCCGCAACTATCACGGAGCCATCAATACAAGTCTCGCATTCTTCCGAACCTGAACATGTAAGAGAATCCGAATTATTGCCACCACAAACACCTGAAGCATCCGTGGCCGACAAGTCTATTTCTAGTTTACCTGAACACGCATTAGACGTCTCTCACCACATCTCTGGAAAACCACCAGAAGTGTTGGCCACAAAAAATATGCAGGGAAGGTACTTTGGACCAAGTACGTCACAAGTTTGCACAGACATGAATGCTACCGGTAGTGGCAATCCAGATTTACAAGAAGAGGATATCGGAAGAGCTGAATCCGTTTTAGAATTATCGAAAATGGTTTCGAAAGATATTGCCGAGCAGGCAATGCATACTACTCCGAACAAAGTGCAGACTTCTGAAACAAATGACACTATATCCTTGCCTTCCAACTCCCAAAATATAATAAATGAATCTGTTACAGAATCAATGAAAACAATGTCACAAGATATTGCGTGCTCGGAAATGTATACTACTCCTAATAAAGTTCAGAATTCTGAATCAAATGACACCATATCCAAGCCCATGCTTTCAAAGCCACAAAATGTAATGGAGGAAAATATTCCATCGCCATTTAAACGTGCTTTATTTTGGCCAGAACCAGAAATGAAAAAAAGGCGTAGTAAGGAACGTCTTCCTTCGGCAATCACTGGTGAGAGTTGGAGAGCATATATGATCAAGAAAGAAAATGAAAAGAAACGTAAGGAAGAAGAGAAAAACAGAAGAATAAAAGAGAGACAAGAAAAACAACTAATAAAAAAGAAAATAGCTGAAGAAACGAAGAAAGTTACGAATAAAAAGAAAATAGCAAGAACTGTAAATAACAAAAGGAAGAGAATTGAATCATCTAGTTCATCAGCAGAAGAAAATGATATACCATATCAAGAAAGTGATCAAGATTTAGAGTTGTCTGAAGAGGACCAGATAAGCCACCCAAAACACACAACTGAATCACTAGAGTCAGATGAAAATATTCCTCTAAAAGACATATCCCTGCAATTACTAAAGAAAAATACATATGTTATAATTAAATACGAAGGAGAATACTTTCCCGGGGTTATTAAAAATATTGATGACAATACTTACGAAATAAGTACAATGGTTGTATCAAGAGGTAATACGTTTCGGTGGCCCGACACTCCCGATCAAATTTGGTATAATAGGGGAGCCATAATAGAAAAAATTCAAATGCCGAAAACCGTCAACAATAGAGGCTTTTTCAAAGTACCTGAAATGCAAAAATATTTGCCATTTATATGTTAA
Protein Sequence
MAPRKDYTKEQMAKAIEEVRKGEKISVAATRYGVPRITLHNKITGKSPIDCNLGPATVLTYEEERILVRWIAFMAEKHFPVTKEQLLDSVQKIISEKKLDSCPFTNNRPGKKWYSSFLKRHPDLSERTAQNLSKSRDEVTEDDILRWFEVIKGYLKNKDLLEVINDPERIFNTDESAFYLQPKAGRVIVRKGEKNVYTASGDEKENLTVLVTGNAAGVLAPPMIVYPYERLPAVIANSVPKDWCIGRSDSGWMCARTFYEYITNVFNPWIEKNNIPKPVILFLDGHRSHMTLHLSDFCKDNGIEVISLYPNSTHLLQPMDVAVFRPLKVSWQNQVKSWKMENPKQTMKREHFAPNFEAALRNIATDTIRNGFRKSGLFPFGPEYVDMNKISSQNRATVSTSALEKKIDTTKQFMNTLESEIRSLFTNEKLNLFNRLYYIPRANVENLLPNEDLSLYVIWAKTKHYLNENLPQRVAATITEPSIQVSHSSEPEHVRESELLPPQTPEASVADKSISSLPEHALDVSHHISGKPPEVLATKNMQGRYFGPSTSQVCTDMNATGSGNPDLQEEDIGRAESVLELSKMVSKDIAEQAMHTTPNKVQTSETNDTISLPSNSQNIINESVTESMKTMSQDIACSEMYTTPNKVQNSESNDTISKPMLSKPQNVMEENIPSPFKRALFWPEPEMKKRRSKERLPSAITGESWRAYMIKKENEKKRKEEEKNRRIKERQEKQLIKKKIAEETKKVTNKKKIARTVNNKRKRIESSSSSAEENDIPYQESDQDLELSEEDQISHPKHTTESLESDENIPLKDISLQLLKKNTYVIIKYEGEYFPGVIKNIDDNTYEISTMVVSRGNTFRWPDTPDQIWYNRGAIIEKIQMPKTVNNRGFFKVPEMQKYLPFIC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00637570; iTF_01172291; iTF_00212390; iTF_00281159; iTF_01179435; iTF_01317230; iTF_01317231; iTF_01317232; iTF_00913554; iTF_00913555; iTF_00913556; iTF_00276320; iTF_00744577; iTF_01359693; iTF_01020206; iTF_00666460; iTF_00666459; iTF_00637568; iTF_00637567;
90% Identity
iTF_01317230;
80% Identity
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