Basic Information

Insect: Pheosia gnoma
Gene Symbol: clz9
Assembly: GCA_905404115.1
Location: FR989908.1:4435112-4437841[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.4e-09 6.7e-06 25.8 0.0 1 35 8 41 8 47 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.4e-09	6.7e-06	25.8	0.0	1	35	8	41	8	47	0.89

Sequence Information

Coding Sequence: ATGGCACCAAGAAAAGATTACACGAAAGAACAAATGGCCAAGGCTATCGAAGAAGTAAGAAAAGGAGAGAAAATATCTGTTGCCGCTACAAGATACGGAATCCCAAGGATAACTTTACATAATAAAATCACCGGGAAAAGTCCTATTGATTGTAATCTAGGTCCAGCTACTGTACTTACATATGAGGAAGAAAGGATACTCGTGAGATGGATAGCTTTTATGGCTGAAAAACACTTCCCTGTGACCAAAGAACAATTGCTTGATAGTGTCCAAAAAATAATATCTGAGAAAAAAATAGATTCCTGTCCGTTCACAAACAATCGGCCAGGAAAAAAGTGGTACTCTTCGTTTTTAAAAAGGCATCCAGATCTCTCTGAACGCACAGCGCAAAATTTAAGTAAAGCGAGAGATGAAGTCACAGAAAATGACATACTCCGTTGGTTTGAAGTCATTAAAGGTTACCTTGAAAATAAAGACTTGCTTGAAGAAATAAATGACCCTGAAAGAATTTTTAATACTGATGAAAGCGCATTCTACTTACAACCAAAAGCTGGACGAGTCATAGTGCGCAAAGGTGAAAAAAATGTCTATACAGCATCAGGAGATGAGAAAGAAAATTTAACTGTGTTGGTTACTGGTAATGCTGCTGGAGTTTTAGCTCCACCAATGATAGTATACCCTTATGAGCGTTTACCTGCCGTAATTGCTAATAGCGTACCAAAAGATTGGTGCATAGGCAGGTCAGATTCAGGCTGGATGTGTGCTAGAACTTTTTATGAATATATTACTAATGTGTTCAATCCATGGATAGAAAAAAATAATATACCCAAACCAGTTATATTATTCTTGGACGGTCATAGGTCACACATGACCCTGCATTTATCAGATTTTTGTAAAGATAATGGGATTGAAATTATCTCTCTATATCCTAACTCGACACATCTACTTCAGCCGATGGATGTTGCGGTCTTTAGGCCTTTAAAGGTATCGTGGCAGAATCAAGTAAAGAGTTGGAAAATGGAAAATCCGAAACAAACAATGAAAAGAGAGCATTTTGCTCCAAACTTTGAGGCAGCTTTGCGAAACATTGCCACAGATACAATAAGAAACGGATTTCGAAAAAGTGGGCTTTTTCCCTTTGGTCCAGAATACGTCGACATGAACAAAATAAGTTCACAAAATCGTGCTACTGTTTCCAGATCAGCATTAGAAAAAAAAATTGACACTACAAAACAGTTTATGAATACCTTGGAATCAGAAATACGAAGCTTGTTTACAAATGAAAAATTGAATTTATTCACCAGGCTGTACTATATACCCAGAGTTAACGTTGAGAACCTGCTTCCGAATGAAGATCTGACGTTATATACCATTTGGGCTAAAAATAAACACTATTTGAATGAAAATTTACCTCAGAGAGTTGCCGCAACTATCACGGAGCCATCAATACAAGTCTCGCATTCTTCCGAACCTGAACATGTAAGAGAATCCGAATTATTGCCACCACAAACACCTGAGGCATCCGTGGCCGACAATTCAATTTCTAGTTTACCTGAACACGTATTTGACGTCTCTCACCACATCTCTGAAAAACCACCCGAAGTGTTGGCCACAAAAAATATGCAGGGAAGGTACTTTGGACCAAGTACGTCCCAAGTTTGCACAGATATGAATGCTATTGGTAATGGCAATCTAGATTTACAAGAAGAGGACATCGGAAGAGCTGAATCCGTTCTAGAATTTTCGAAAGTGGTTGCTAAAGATATTGCCGAGCAGGCAATGCATACTACTCCGACCAAAGTTCAGACTTCTGAAACAAATGACAATATATCAAAATCCTTGCCTTCCAACTCCCAAAATATAATAAAGGAAAATATTGAAACTGTTACAGAATCAACGAAAACGATATCAAAAGATATTGCCTGCTCGGCAATGTATACTACTCCTAATAAAGTTCAGAATTCTGAATCAAATGACACTATATCCAAGCCCATGCCTTCAAATCCACAAAATGTAATGGAGGAAAATATTCCATCGCCATTTAAACGTGCTTTATTTTGGCCAGAACCAGAAGTGAAAAAAAGGCGTAGTAAGGAACGTCTTCCTTCGGCAATCACTGGTGAGACTTGGAGAGCATATATGATCAAGAAAGAAAATGAAAAGAAACAGAAGGAAGAAGAGAAAAACAAAAGAATAAAAGAGAGACAAGAAAAACAACTAATAAAAAAGAAAATAGCAGAAGAAGCGAAGAAAGTTAGAAATAAAAAGAAAATAGCAAAAAATATAAATAACAAAAGGAAGAGAATTGAATCATCTAGTTCATCAGCAGAAGAAAATGATATACCATATCAAGAAAGTGACCAAGATTTAGAGTTGTCTGAAGAAGACCAGATAAACCACCCAAAACACAGAACTGAATCACTAGAGTCAGATGAAAATATTCCTCTAAAAGACATATCCCTGCAATTACTAAAGAAAAATACATATGTTATAATTAAATACGAAGGAGAATACTTTCCCGGTTTGATTAAAAATATTGATAATAATAATTACGAAATAAGTACAATGGTTCTATCAAGAGGAAATACGTTTCGGTGGCCCGACACTCCAGATCAAATATGGTATAATAGGGGAGCTATAATGGAGAAAATTCAAAAGCCTAACCCCGTCAACAACAGGGGCTTTTTTAAAGTACCTGAAATGGAAAAATATTTACCATTCATATGTTAA
Protein Sequence: MAPRKDYTKEQMAKAIEEVRKGEKISVAATRYGIPRITLHNKITGKSPIDCNLGPATVLTYEEERILVRWIAFMAEKHFPVTKEQLLDSVQKIISEKKIDSCPFTNNRPGKKWYSSFLKRHPDLSERTAQNLSKARDEVTENDILRWFEVIKGYLENKDLLEEINDPERIFNTDESAFYLQPKAGRVIVRKGEKNVYTASGDEKENLTVLVTGNAAGVLAPPMIVYPYERLPAVIANSVPKDWCIGRSDSGWMCARTFYEYITNVFNPWIEKNNIPKPVILFLDGHRSHMTLHLSDFCKDNGIEIISLYPNSTHLLQPMDVAVFRPLKVSWQNQVKSWKMENPKQTMKREHFAPNFEAALRNIATDTIRNGFRKSGLFPFGPEYVDMNKISSQNRATVSRSALEKKIDTTKQFMNTLESEIRSLFTNEKLNLFTRLYYIPRVNVENLLPNEDLTLYTIWAKNKHYLNENLPQRVAATITEPSIQVSHSSEPEHVRESELLPPQTPEASVADNSISSLPEHVFDVSHHISEKPPEVLATKNMQGRYFGPSTSQVCTDMNAIGNGNLDLQEEDIGRAESVLEFSKVVAKDIAEQAMHTTPTKVQTSETNDNISKSLPSNSQNIIKENIETVTESTKTISKDIACSAMYTTPNKVQNSESNDTISKPMPSNPQNVMEENIPSPFKRALFWPEPEVKKRRSKERLPSAITGETWRAYMIKKENEKKQKEEEKNKRIKERQEKQLIKKKIAEEAKKVRNKKKIAKNINNKRKRIESSSSSAEENDIPYQESDQDLELSEEDQINHPKHRTESLESDENIPLKDISLQLLKKNTYVIIKYEGEYFPGLIKNIDNNNYEISTMVLSRGNTFRWPDTPDQIWYNRGAIMEKIQKPNPVNNRGFFKVPEMEKYLPFIC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01358815;
90% Identity: iTF_01317230;
80% Identity: -