Cnup010996.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Catocala nupta
Gene Symbol
clz9
Assembly
GCA_963675205.1
Location
OY776082.1:23387073-23389797[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.5e-08 3.6e-05 25.2 0.0 1 35 8 41 8 47 0.89

Sequence Information

Coding Sequence
ATGGCACCAAGAAAAGACTACACAAAAGAACAAATGGCCAAGGCTATCGAAGAAGTAAGAAAAGGAGAGAAAATATCTGTTGCTGCTACAAGATACGGAGTCCCAAGGATaactttacataataaaatcacCGGGAAAAGTCCCATTGATTGTAATCTAGGTCCAGCTACTGTACTTACATATGAGGAAGAAAGGATACTCGTGAGATGGATAGGCTTTATGGCTGAAAAACATTTCCCTGTGACCAAAGAACAATTGCTTGATAGCGTCCAAAAAATAATATCTGAGAAAAATTTAGATTCCTGTCCGTTCACAAACAATCGGCCAGGGAAAAAGTGGTACTCTTCGTTTTTAAAAAGGCATCCAGATCTCTCTGAACGCACAGCGCAAAATTTAAGTAAAGCGAGAGATGAAGTCACAGAAGATGACATAATCCGTTGGTTTGAAGTAATTAAAAGTTACCTTGCAAATAAAGATTTGCTTGAAGTAATAAATGActctgaaagaatttttaatactgATGAAAGCGCATTCTACTTACAACCAAAAGCGGGACGAGTTATAGTGCGCAAAGGTGAAAAAAATGTCTATACAGCATCAGGAGATGAGAAAGAAAATTTAACTGTGTTGGTTACTGGTAATGCTGCTGGAGTTTTAGCTCCACCAATGATAGTATACCCTTATGAGCGTTTACCTGCTGTAATTGCTAATAGCGTACCAAAAGATTGGTGCATAGGCAGGTCAGATTCAGGCTGGATGTGTGCAAGAACTTTTTATGAATACATTACTAATGTGTTCAATCCATggatagaaaaaaataatatacctaagcCAGTTATATTATTCTTGGACGGACATAGGTCACACATGACCCTGCATTTATCAGATTTTTGTAAAGATAATGGAATTGAAGTTATCTCTCTATACCCTAACTCGACACATCTACTTCAGCCGATGGATGTTGCGGTCTTCAGACCTTTAAAGGTATCGTGGCAGAATCAAGTGAAGAGTTGGAAAATGGAAAATCCGAAACAAACAATGAAAAGAGAGCATTTTGCTCCAAACTTTGAGGCAGCTTTGCGAAACATTGCTACAGATACAGTAAGAAACGGATTTCGAAAAAGTGGGCTTTTCCCCTTTGGTCCAGAATACGtcgacatgaacaaaataagTTCACAAAATCGTGCCACTGTCTCGAAATCagcattagaaaaaaaaattgatacgACGAAACAGTTTATGAATACCTTGGAATCAGAAATACGAAGCTTGTTTACAAatgaaaaattgtatttattcacCAGGCTGTACTATATACCCAGAGCTAACGTTGAGAACCTGCTGCCGAATGAAGATCTGTCGTTATATACCATTTGGGCTAAAACTAAACACTATTTGAATGAAAATTTACCTCAGAGAGTTTCCGCAACTATCACGGAGCCATCAATACAAGTCTTGCATTCTTCCGGACCAGAACATATAAGAGAATCTGAATTATTGCCACCACAAACACCTGAGGCATCCGTGGCCGACAATTCAATTTCTAGTTCACCTAAACACGTATTAGACGTCTCTCACCACATCTCTGAAGAACCACCAGAAGTGTTGGCCCCAAAAAATATGCAGGAAAGGTACTTTGGACCAATTACGTCACAAGTTTGTACAGACATAAATGCTACCGGTAGTGGCAATCCAGATTTACAAAAAGAAGACATCGGAAGAGCTGAATCCAATCTAAAGTTAACGAAAATGGTTTCGAAAGATATTGGCGAGCAGGTAATGCATACTACTCCGAACAAAGTTCAGACTTCTGAAACAAATGACACTTCGAAATCCTTGCCTTCCAactcacaaaatataataaaggaaaatattgaaTCTGTTACAGAATCAACGAAAACGATGTCAAAAGACATTGCCTGCTCGGCAATTTATACTACTCCTAATAAAGTTCAGAATTCTGAATCAAATGACACTATATACAAGCCCATGCCTTCAAAGCCACAAAATGTAATGGAGaaagaaaatgaaaagaaacagaaggaagaagagaaaaacaaaagaataaaagagAGACAAGAGAAAcaactaataaaaaagaaaatagctgAAGAAACGAAgaaagttacaaataaaaaaaatatagcaaaatcTGTAAATAACAAAAGGAAGAGGATTGAATCATCTAGTTCATCAGTAGAAGAAAATGATATACCATATCAAGAAAGTGACCAAGATTTAGAGTTGTCTGAAGAAGACCAGATAAACCACCCAAAACACAGAACTGAATCACTAGAGTCAGATGAAAATATTCCTCTGCAAGACATATCCCTGCaattactaaagaaaaatacatatgttataattaaatatgaaggAGAATACTTTCCCGGgatgattaaaaatattgataacaatACTTATGAAATAAGTACAATGGTTCTATCAAGAGGAAATACGTTTCGGTGGCCCGACACTCCGGATCAAATTTGGTATAATAGGGGAGCTATAATGGAAAAAATTCAGAAGCCTAAAACCGTCAACAATAGGGGATTTTATAAAGTACCggaaatggaaaaatatttaccatttgtatgttaa
Protein Sequence
MAPRKDYTKEQMAKAIEEVRKGEKISVAATRYGVPRITLHNKITGKSPIDCNLGPATVLTYEEERILVRWIGFMAEKHFPVTKEQLLDSVQKIISEKNLDSCPFTNNRPGKKWYSSFLKRHPDLSERTAQNLSKARDEVTEDDIIRWFEVIKSYLANKDLLEVINDSERIFNTDESAFYLQPKAGRVIVRKGEKNVYTASGDEKENLTVLVTGNAAGVLAPPMIVYPYERLPAVIANSVPKDWCIGRSDSGWMCARTFYEYITNVFNPWIEKNNIPKPVILFLDGHRSHMTLHLSDFCKDNGIEVISLYPNSTHLLQPMDVAVFRPLKVSWQNQVKSWKMENPKQTMKREHFAPNFEAALRNIATDTVRNGFRKSGLFPFGPEYVDMNKISSQNRATVSKSALEKKIDTTKQFMNTLESEIRSLFTNEKLYLFTRLYYIPRANVENLLPNEDLSLYTIWAKTKHYLNENLPQRVSATITEPSIQVLHSSGPEHIRESELLPPQTPEASVADNSISSSPKHVLDVSHHISEEPPEVLAPKNMQERYFGPITSQVCTDINATGSGNPDLQKEDIGRAESNLKLTKMVSKDIGEQVMHTTPNKVQTSETNDTSKSLPSNSQNIIKENIESVTESTKTMSKDIACSAIYTTPNKVQNSESNDTIYKPMPSKPQNVMEKENEKKQKEEEKNKRIKERQEKQLIKKKIAEETKKVTNKKNIAKSVNNKRKRIESSSSSVEENDIPYQESDQDLELSEEDQINHPKHRTESLESDENIPLQDISLQLLKKNTYVIIKYEGEYFPGMIKNIDNNTYEISTMVLSRGNTFRWPDTPDQIWYNRGAIMEKIQKPKTVNNRGFYKVPEMEKYLPFVC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01358815;
90% Identity
-
80% Identity
-