Beup021860.1
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- clz9
- Assembly
- GCA_951802675.2
- Location
- OX637892.1:6411576-6414251[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-08 1.8e-05 25.1 0.0 1 35 8 41 8 47 0.89 2 2 3.7 1.8e+03 -0.5 0.0 23 30 758 765 753 766 0.87
Sequence Information
- Coding Sequence
- ATGGCACCAAGAAAAGACTACACTAAAGAACAAATGGCTAAGGCTATCGAAGAAGTAAGAAAAGGAGAGAAAATATCTGTTGCCGCTACAAGATACGGAGTCCCAAGGataactttacataataaaatcacCGGAAAAAGTCCTATTGATTGTAATCTAGGTCCAGCTACTATACTTACATATGAGGAAGAAAGAATACTCGTGAGATGGATAGCCTTTATGGCTGAAAAACACTTCCCTGTGACCAAAGAACAATTGCTTGATAgtgttcaaaaaataatatcagaGAAAAATTTAGATTCCTGTCCGTTCAGAAACAATCGGCCGGGAAAGAAGTGGTACTCTTCGTTTTTAAAAAGACATCCAGATCTTTCTGAACGCACAGCGCAAAATTTAAGTAAAGCGAGAAATGAAGTGACAGAAGATGACATACTCCACtggtttaaagtaattaaaggTTACCTTGAAAATAAAGACTTGCTTGAAGTAATAAATGACcctgaaagaatttttaatactGATGAAAGCGCATTCTACTTACAACCAAAAGCTGGACGAGTCATTGTGCGCAAAGGTGAAAAAAATGTCTATACAGCATCAGGAGATGAGAAAGAAAATTTAACTGTGTTGATTACTGGTAATGCTGCTGGAGTTTTAGCTCCAACAATGATAGTATACCCTTATGAGCGTTTACCGGCCGTAATTGCTAATAGCGTACCAAAAGATTGGTGCATAGGCAGGTCAGATTCAGGCTGGATGTGCGCTAGAACTTTTTATGAATACATTACTAATGTGTTCAATCCATGGatagaaacaaataatatacctaaaccAGTTATATTATTCTTGGACGGTCATAGGTCACACATGACCCTGCATTTATCAGATTTTTGTAAAGATAATGGGATTGAAGTTATCTCTCTATACCCTAACTCGACACATCTACTTCAGCCGATGGATGTTGCGGTCTTTAGGCCTTTAAAGGTATCGTGGCAGAATCAAGTGAAGAGTTGGAAAATGGAAAATCCGAAACAAACAATGAAAAGAGAGCATTTCGCTCCAAACTTTGAGGCAGCTTTGCGAAACATTGCCACAGATACAATAAGAAACGGATTTCGAAAAAGTGGGCTTTTTCCTTTTGGTCCAGAATACGTAGACATGAACAAAATAAGTTCACAAAATCGTGCTACTGTTTCCAAATCAGCATTAGAAAAGAAAATTGACACGACTAAACAGTTTATGAATAGCTTAGAATCAGAAATACGATGTTTGTTTACAaatgaaaaattgaatttattcacCAGGTTGTACTATATACCCAGAGCTAACGTTGAGAACCTGCTTCCGAGTGAAGATCTGTCGTTATATACCATTTGGGCTAAAACTAAAcactatttaaatgaaaatttacctCATAGAGTTGCAGCAACCATCACGGAGTCATCAATACAAGTCTCGCATTCTTCCGAACCTGAACATGTAAGAGAATCCGAATTATTGCCATCACAAACACCTGAGGCATCTGTGGCCGATAATTCAATTTCTAATTTACCTGAACCCATATTAGACATCTCTCACCATATCTCTGAAAAACCACCAGAAGTGTTGGCTACAAAAAATATGCAGGAAAGGTACTTTGTACCAAGTCCGTCACAAGTTTGCATTGACATGAATGCTACCGATAGTGGTAATCTAGATTTACAAGAAGAGGACATCGGAAGAGCTGAATCCGTTCTAGAATTATCGGAAATAGTTTTGAAAGATATTACCGAGCAGGCAATGCATACTACTCCGAACAAAGTTCAGACTTCAGAAACAAATTACACTATATCGAAATCCTTACCTTCCAACTCCCAAAATATAACTGCCTGCCCGGTAATGTATACTACTCCTAATAAAGTTCATAATTCCGAATCAAATGAAACTATATCAAAGCCCATACCTTCAAATCTACCAAATgtaatgaaggaaaatattccATCGCCATTTAAACGTGCTTTGTTTTGGCCAGAACCAGAAATGAAAAAAAGGCGTAGTAAGGAACGTCTTCCTTCGGCAATCACTGGTGAGAGTTGGAGAGCATATATGATCAAGaaagaaaatgaaaagaaaCAGAAGGAAGAAGAGAAAAACAAAAGAATTAAAGAGAGGCAAGAAAAACaactaataaaaaagaaaatagctGAAGGAACGAAGAAAGTgacaaataaaaagaaaatagcaAAAACTGTAAATAACAAAAGGAAGAAAATTGAATCATCTAGTTCATCAGCAGAAGAATATGATATACCATATCAAGAAAGTGACCAAGATTTAGAGTTGTCTGAAGAAGACCAGGTAAACCACCCAAAACACAGAACTGAATCACTAGAGTCAGATGAAGATATTCCGCTAAAAGACATATCCCTACAAttactaaagaaaaatatatatgttataattaaatacgaaGGGGAATACTTTCCCgggttgattaaaaatattgataacaaTGCTTACGAAATAAGTACAATGGTTCTATCAAAAGGAAATACGTTTCGGTGGCCCGACACTCCAGatcaaatttggtataataGGGAAGCTATAATGGAAAAAATTCAAAAGCCTAAAATTATCAACAAAAGGGGCTTTTTCAAAGTACCagaaatggaaaaatatttaccatttatatgttaa
- Protein Sequence
- MAPRKDYTKEQMAKAIEEVRKGEKISVAATRYGVPRITLHNKITGKSPIDCNLGPATILTYEEERILVRWIAFMAEKHFPVTKEQLLDSVQKIISEKNLDSCPFRNNRPGKKWYSSFLKRHPDLSERTAQNLSKARNEVTEDDILHWFKVIKGYLENKDLLEVINDPERIFNTDESAFYLQPKAGRVIVRKGEKNVYTASGDEKENLTVLITGNAAGVLAPTMIVYPYERLPAVIANSVPKDWCIGRSDSGWMCARTFYEYITNVFNPWIETNNIPKPVILFLDGHRSHMTLHLSDFCKDNGIEVISLYPNSTHLLQPMDVAVFRPLKVSWQNQVKSWKMENPKQTMKREHFAPNFEAALRNIATDTIRNGFRKSGLFPFGPEYVDMNKISSQNRATVSKSALEKKIDTTKQFMNSLESEIRCLFTNEKLNLFTRLYYIPRANVENLLPSEDLSLYTIWAKTKHYLNENLPHRVAATITESSIQVSHSSEPEHVRESELLPSQTPEASVADNSISNLPEPILDISHHISEKPPEVLATKNMQERYFVPSPSQVCIDMNATDSGNLDLQEEDIGRAESVLELSEIVLKDITEQAMHTTPNKVQTSETNYTISKSLPSNSQNITACPVMYTTPNKVHNSESNETISKPIPSNLPNVMKENIPSPFKRALFWPEPEMKKRRSKERLPSAITGESWRAYMIKKENEKKQKEEEKNKRIKERQEKQLIKKKIAEGTKKVTNKKKIAKTVNNKRKKIESSSSSAEEYDIPYQESDQDLELSEEDQVNHPKHRTESLESDEDIPLKDISLQLLKKNIYVIIKYEGEYFPGLIKNIDNNAYEISTMVLSKGNTFRWPDTPDQIWYNREAIMEKIQKPKIINKRGFFKVPEMEKYLPFIC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01358815;
- 90% Identity
- -
- 80% Identity
- -