Basic Information

Insect: Sinelater perroti
Gene Symbol: -
Assembly: GCA_036346155.1
Location: JARFIY010000196.1:4420998-4432709[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.2e-05 0.0036 19.9 0.4 1 23 144 166 144 166 0.95

2 14 0.0012 0.35 13.6 0.9 3 23 174 194 173 194 0.99

3 14 0.00011 0.033 16.9 0.1 1 23 293 315 293 315 0.98

4 14 0.62 1.8e+02 5.1 0.1 1 23 321 344 321 344 0.95

5 14 3.1e-06 0.00089 21.8 3.4 1 23 369 391 369 391 0.97

6 14 0.0033 0.93 12.3 0.0 1 23 404 426 404 426 0.95

7 14 0.68 1.9e+02 5.0 1.0 1 23 432 455 432 455 0.94

8 14 0.031 9 9.2 2.6 2 21 463 482 463 484 0.89

9 14 9.3e-05 0.027 17.2 3.9 3 23 492 512 490 512 0.98

10 14 0.014 4.1 10.3 1.1 3 23 519 539 518 539 0.97

11 14 0.0044 1.3 11.9 0.2 3 23 561 581 559 581 0.97

12 14 0.00014 0.04 16.6 0.3 1 23 587 609 587 610 0.95

13 14 0.3 87 6.1 0.2 1 23 624 646 624 646 0.96

14 14 5.9e-05 0.017 17.8 0.2 1 23 984 1006 984 1006 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.2e-05	0.0036	19.9	0.4	1	23	144	166	144	166	0.95
2	14	0.0012	0.35	13.6	0.9	3	23	174	194	173	194	0.99
3	14	0.00011	0.033	16.9	0.1	1	23	293	315	293	315	0.98
4	14	0.62	1.8e+02	5.1	0.1	1	23	321	344	321	344	0.95
5	14	3.1e-06	0.00089	21.8	3.4	1	23	369	391	369	391	0.97
6	14	0.0033	0.93	12.3	0.0	1	23	404	426	404	426	0.95
7	14	0.68	1.9e+02	5.0	1.0	1	23	432	455	432	455	0.94
8	14	0.031	9	9.2	2.6	2	21	463	482	463	484	0.89
9	14	9.3e-05	0.027	17.2	3.9	3	23	492	512	490	512	0.98
10	14	0.014	4.1	10.3	1.1	3	23	519	539	518	539	0.97
11	14	0.0044	1.3	11.9	0.2	3	23	561	581	559	581	0.97
12	14	0.00014	0.04	16.6	0.3	1	23	587	609	587	610	0.95
13	14	0.3	87	6.1	0.2	1	23	624	646	624	646	0.96
14	14	5.9e-05	0.017	17.8	0.2	1	23	984	1006	984	1006	0.98

Sequence Information

Coding Sequence: ATGGAGGAGAGCTACACCCTCGTGTGGGAGGACGGCAGTACTGTCGTCCAGAATGAGGAGGTCATCTGCGGCATCGATGACACCGACTGCACCATCATCCCCACTGAGGCCAGCGGCTTCGCTGACGTTTGCGAGGAGGTTGTGGTGCAAGGCAACCACGACAGCGAAGCGGAAAGCGGGGGTGAAGCCCAATCTAGTCGCATCATGTATGTCACCGAGGACGACATGATGGTAATGCAACAGTCCTCCGATATACCATTTGAAGAAGAACAATTTGTTGAAATTTCTACCGAGGAGGTGGTGGCAGAGCCTTGGAGTGAAAATTGTTCAGAGATTATTGTGGGCTCCGAGGAACATGTAGAGGAGCCTTCAGAAGATGTGGAAATTCCATTGCCAACTGACCAGGATCAGTACACTGCAGCGCGGCCATATCCATGTGACTTTTGTCCACGGCGGTTCAGGAAGAAAGCCAATCTCATGAACCACATGGTAGCTCACCAGACAGATCGTCCGCATGGTTGCAACTTGTGCGGAGTCCGTTATATTCGCAAGTGTGATCTTATAAACCACCTCAAAATACATGCCTATGTGCCTGACACTGATGggcttgatgatgatgatacgCAGACAATGGACGAGTCCGATTCAGAGAAGGCTTATAAACGCTCTAAGCCATTCCTGAAGAAGCGCAAAAGCAAGATCAAAATCAAGGAGGACCAGGATGACCAGTTGGCCTCTAGCTCACGTTCCTATGATTATGTTGATGAAGATGTGCGGCTAATGGAAGCAATGGAGAGCAACACCAATAGATCTGATTATTCAAACCATCCCGTGCCTACAGAGCCAAGGTTTCCCATTACGGACCCGAGGAAGCCGTTTGTGTGCCAGCACTGTGGGGTGGGATTTGCAAGGGAAAAGGCTCTGGCCTCCCATGCTCGTGTGCATGGTGGTGACAGCCCATTTGAGTGCCGGACCTGTGAGGAGATCTTCTGGGATATTGCTCTTCTCCGTGAGCACGTGCGCTTGAAGCACGGGGGAGTGGAGCAGAACTTTGACGAAGACGACGATGAAGATTACTCTGATGAGGATACAAAGTATGGCCAGTTCTTCTGCCCTACCTGCGGCATGTCATTTCACCGGCAGGACAACATGAAGCGTCACCAGCGGATCCACATCAAGGACGAAACAACGAAGGATTCTGTCTTTGGCCACGTGTGCAACGTGTGTGGCGAGTCGTTCCCTGAGGCTCTGGAGCTGCTCGCGCATGCGGAGGTGCACGCGCGCGGCTGGGACCACCGCTGCATGGTCTGCGGCGAGATCTGCGTTGACGAGCACGCCGTGGCCGACCATGTACAGAACAGGCACTCGAAGAACCTGCCGCCGAACACGTGCCTGATGTGCGGCCGCACCTGCAAGGACCGTCGCACGCTGCTGAAGCACTCGGTTGAGCACTCGCGTGAGAAACAGTTTGGCTGCACGAAGTGCGACAAGACGTTCCACAACAAGGCTCGACTGAAGCGGCACATGATCTCGCACCGCAACAAGGTGGTGTTCTGCGAGAAGTGTGGCGAGGACTTCCCTGACGGCCGCTCGCTGATGAACCACCGGCACAGCCACAGCAGCGTGTCGGGCGCCACTTCCCATGCAGGGAGTGCGGGAAGACGCGAGAGGCCGTATGGGTGCAGGTTTTGTTGGAAGGCGTTTGCGGACGGCGGGACATTGAGGAAGCATGAGCGGATCCACACTGGGGAAAAGCCGTATGCTTGTGCGGTATGCCCACGGGCTTTCAACCAGCGCGTTGTGTTGCGGGAGCACATCCGCTCTCATCACTCAGGACCCGATCCAAACCACAGCCACAGCATGACCCCCTACTCATGCGCGGTGTGTTCGGATTTGTTTGCTACTTCTCAGGATTTAATTGTACATTTGATTCATCACTGTGATTTGAACACGGCTATGAAACGACAGCCTCAGGTGGGGCCCAGAAAGTACAAACGAAGACGCAAACTCAAGCCGCACGAGCTCCAGATGATCACGACCCCAAACGAAGATGACGACATGGACCACGTGACCGACTCCGACAACGAGCACGAGTACAAGCGGAAGATAGTGAAGAAGGCCAAGAAGACGCCGCCGAAAACCAACATCGAAGAGAGCTATGCCGATGTCTACAACAGTTTCACGTCCGCCATTGAGACAGTCAACTCCATCGTGAACTCGAAGCCTAATAAAGCCAAGAGAAAATTGAAAGTGGAGCCGCAGATCGTGCCGTCGCGGCCCAAGATGATCCACACCCAGAAGGCGCGCGTGCCAGTGGAGACCAGCGACGGCGGCAAGGTGCGCCACAAGACCAAGACGCTGATTACGCACACGCAACCCACGGAGCTGAGGTCAGCCACGGGCGAGAGGATCCGCCCACGCACCAAGAATGTCAGCTACCACATCCCAGAGCTGGAAAAACTCCCGCTCGCTACTTTCCCGACGGAGGACGACACCGAGCAAGCCGTGAATAATCTTCTGGCTAGTGATGACACTTTGCAAAATGATGATAGGACAGAACATAACAACGCTCAGAGTAACGGGATCTTGGAAGCTCCTCCGGAAATTGTCAGCGAGCAGACCATAGAGGCCGATGTGCCGGTTCCTACAAACATAATCAAAGTAACAACCACCACCAGTAGGagctacaaaaagaaaacgtaCAGTTTAAGGCCGGGTCGGACGATAATTGGGCCTGGGAGCAAGGTGGTTCGACTAGTTAAAGGCGGCATGATCGTGTCGAAGAACAAAAAGATCAAGGACGAACCAGACATGGAGCCCGAGAAGATAATTCCAGACTTAACCGAGGTGACGGTGCAGACCACGCCATTCATAAAACAAGAACTGACCGTGGATCCCAGTCCCCTGCACGAGCTGGCCGAGCTGTCTGTGCAACACGCCCAAAACATCTACAAGTGCGAAATGTGCAGTGAAATGTTCTCTGACCGCGAGCAGCTTTTAGAACATGTGTCTGTACACATCTGA
Protein Sequence: MEESYTLVWEDGSTVVQNEEVICGIDDTDCTIIPTEASGFADVCEEVVVQGNHDSEAESGGEAQSSRIMYVTEDDMMVMQQSSDIPFEEEQFVEISTEEVVAEPWSENCSEIIVGSEEHVEEPSEDVEIPLPTDQDQYTAARPYPCDFCPRRFRKKANLMNHMVAHQTDRPHGCNLCGVRYIRKCDLINHLKIHAYVPDTDGLDDDDTQTMDESDSEKAYKRSKPFLKKRKSKIKIKEDQDDQLASSSRSYDYVDEDVRLMEAMESNTNRSDYSNHPVPTEPRFPITDPRKPFVCQHCGVGFAREKALASHARVHGGDSPFECRTCEEIFWDIALLREHVRLKHGGVEQNFDEDDDEDYSDEDTKYGQFFCPTCGMSFHRQDNMKRHQRIHIKDETTKDSVFGHVCNVCGESFPEALELLAHAEVHARGWDHRCMVCGEICVDEHAVADHVQNRHSKNLPPNTCLMCGRTCKDRRTLLKHSVEHSREKQFGCTKCDKTFHNKARLKRHMISHRNKVVFCEKCGEDFPDGRSLMNHRHSHSSVSGATSHAGSAGRRERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPNHSHSMTPYSCAVCSDLFATSQDLIVHLIHHCDLNTAMKRQPQVGPRKYKRRRKLKPHELQMITTPNEDDDMDHVTDSDNEHEYKRKIVKKAKKTPPKTNIEESYADVYNSFTSAIETVNSIVNSKPNKAKRKLKVEPQIVPSRPKMIHTQKARVPVETSDGGKVRHKTKTLITHTQPTELRSATGERIRPRTKNVSYHIPELEKLPLATFPTEDDTEQAVNNLLASDDTLQNDDRTEHNNAQSNGILEAPPEIVSEQTIEADVPVPTNIIKVTTTTSRSYKKKTYSLRPGRTIIGPGSKVVRLVKGGMIVSKNKKIKDEPDMEPEKIIPDLTEVTVQTTPFIKQELTVDPSPLHELAELSVQHAQNIYKCEMCSEMFSDREQLLEHVSVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00789584; iTF_00399792; iTF_00838836; iTF_00978645; iTF_00003969; iTF_00151844; iTF_01284978;
90% Identity: -
80% Identity: -