Basic Information

Insect: Aquatica lateralis
Gene Symbol: -
Assembly: None
Location: Alat1.3:200813-205759[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.7e-06 0.00017 20.0 1.2 1 23 141 163 141 163 0.95

2 15 0.00073 0.035 12.8 1.1 3 23 171 191 170 191 0.99

3 15 3.7e-05 0.0017 16.9 0.1 1 23 284 306 284 306 0.98

4 15 0.25 12 4.8 0.1 1 23 312 335 312 335 0.95

5 15 1.2e-05 0.00055 18.5 5.5 1 23 361 383 361 383 0.97

6 15 0.0018 0.084 11.6 0.0 1 23 396 418 396 418 0.94

7 15 0.006 0.28 9.9 0.1 1 23 424 447 424 447 0.95

8 15 0.02 0.95 8.3 3.7 2 23 455 476 455 476 0.90

9 15 2.6e-05 0.0013 17.3 3.3 3 23 484 504 482 504 0.98

10 15 0.002 0.093 11.4 0.3 2 23 510 531 509 531 0.96

11 15 4.6e-06 0.00022 19.7 0.2 1 23 539 561 539 561 0.98

12 15 0.0014 0.067 11.9 0.2 3 23 569 589 567 589 0.97

13 15 4.5e-05 0.0021 16.6 0.3 1 23 595 617 595 618 0.95

14 15 0.097 4.6 6.1 0.2 1 23 632 654 632 654 0.96

15 15 0.00014 0.0068 15.0 0.1 1 20 985 1004 985 1007 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.7e-06	0.00017	20.0	1.2	1	23	141	163	141	163	0.95
2	15	0.00073	0.035	12.8	1.1	3	23	171	191	170	191	0.99
3	15	3.7e-05	0.0017	16.9	0.1	1	23	284	306	284	306	0.98
4	15	0.25	12	4.8	0.1	1	23	312	335	312	335	0.95
5	15	1.2e-05	0.00055	18.5	5.5	1	23	361	383	361	383	0.97
6	15	0.0018	0.084	11.6	0.0	1	23	396	418	396	418	0.94
7	15	0.006	0.28	9.9	0.1	1	23	424	447	424	447	0.95
8	15	0.02	0.95	8.3	3.7	2	23	455	476	455	476	0.90
9	15	2.6e-05	0.0013	17.3	3.3	3	23	484	504	482	504	0.98
10	15	0.002	0.093	11.4	0.3	2	23	510	531	509	531	0.96
11	15	4.6e-06	0.00022	19.7	0.2	1	23	539	561	539	561	0.98
12	15	0.0014	0.067	11.9	0.2	3	23	569	589	567	589	0.97
13	15	4.5e-05	0.0021	16.6	0.3	1	23	595	617	595	618	0.95
14	15	0.097	4.6	6.1	0.2	1	23	632	654	632	654	0.96
15	15	0.00014	0.0068	15.0	0.1	1	20	985	1004	985	1007	0.94

Sequence Information

Coding Sequence: ATGGACGAAAGTTACACGTTGGTGTGGGAGGATGGTTCCGCGGTCATCCAAACCGAGGAAGTCATTTGCGGAATCGACAACGATTGCGCAATTCTCACAGATTCCAATGAGTTTTCAGAAGTGTGCGAAGAGGTTGTTATTCAGGGCAACCATGATCGAAGCATTGAAAACAATGCACAAACTGATAATGGTGTTATGTACGTAACTGAAGATGACATGATGGTGATTCAACAGCCTTCGGAGGTATACACCGACGAACAACTACTCGAAATAACCAACGAAGAAGTGGTTGCCGAATCTTGGAGTGAGAACTGTTCGGAGATTATAGTTGGTTCTGAAGAAAACGTCGAAGAACAAGCAACAGATGAAGTTGAGATTCCTCTTCCGACTGATCAAGATCAATACACGGCAGCCAGGCCATATCCTTGTGATTTTTGTAGTCGGCGTTTCAGGAAAAAATCTAATCTTATGAACCATATGGTGGCGCATCAAACAGATCGTCCGCATGGTTGTAATTTATGCGGTGTACGTTATATTCGAAGATGTGATTTAATGAATCACTTAAAAATCCATGCGTATATACCCGAAACTGACGGTTTAGAAGACGATGAAAATCAACCGTTAGATGATTCAGACTCCGAAAGACAGAAATCTAAATTTTTGAAGAAACGTAAAGGAATTAAAATTAAGAAAGAAGATGATGGGTCTAATTCTCGGTCTTATAATTATATTGACGAAGACGTTAAGCTTATGGAAGAAATGGAATCGAAAGATTACTCGAATTATCTTCCTCAAGAGAATCATCCGATTACACAACCTCGATTTCCAATAACCGATCCACGAAAACCGTTTGTATGTCAACACTGTGGTGTCGGGTTTGCTAGGGAAAAGGCTTTGGCTTCGCATGCTAGAGTACATGGTGGTGATAGTCCCTTCGAATGTCGTACCTGCGAGGAAGTGTTTTGGGATATTGCGTTGATGCGTGAACATGTACGTATAAAACATGGTGGCATCGAACAAAATTTTGATGACGATGACGATGACGAAGATTACTCGGACGAAGAAACTAAATATGGGGAGTTTTTTTGTCCTACGTGTGGTATGTCTTTCCACAGACAAGATAATATGAAACGTCATCATCGAATACACATTAAAGAAGAACTGACCAAAGATTCGGGGTTCGGGCATATTTGTAATGTCTGTGGGGAATCGTTTCCAGAAGCTTTAGAACTTTTAGCACATGCAGAAGTACACGCTAGGGGTTGGGAACATCGCTGCATGATTTGTGGAGAAGTTTTCATCAATGATCAAGCGGTAGCATCTCATGTGTTAACTAAGCACGGTAAGAATCTACCACCAAATACTTGTATGATGTGCGGTCGTACTTGTAAAGATCGTCGCACGCTCCTAAAACATTCGTTCGAACATTCCCAAGAAAAATTATTCGGTTGTTCGAAATGTGACAAAACGTTCCACAACCAAGCACGTTTGAAACGTCACATGATTTCTCACCGAAACAAAGTAGTGTCATGTGAAGAATGTGGAGAAGATTTTCCTGATGGACGAACGTTAATGAATCACCGGCATAGTCACAGCAGTGTATCTGGTAGACATTTTCCATGTTTGGAATGTGGTAAGACTTTCGGATCTAGAAGCTCGCAACAGATCCACATCAGGATTCACACTGGTGAAAGACCGTATGGGTGCAGATTTTGTTGGAAGGCGTTTGCCGATGGTGGTACTTTACGAAAACACGAAAGAATCCATACGGGAGAAAAACCGTATGCTTGTGCTGTTTGTCCACGTGCTTTTAATCAAAGGGTGGTGCTGAGGGAACACATCCGGTCACATCATTCGGGACCCGATCCAAATTACAGCCATAGTATGACGCCGTATTCGTGCGCCGTCTGTTCAGATCTGTTTGCCACGTCGCAAGATTTGATCGTGCATTTAATTCATCACTGTGATTTGAATACAGCAATGAAACGACAACCACAGGTGGGTCCACGAAAATATAAGCGAAGAAGAAAGTTGAAACCACACGAGATTGAATTAATGACCACGCGTACAAAAGACGACGAAGATGAGGATCCTTTGACGGACACAGACGACAGCGAATACAAAAGGAAAATAGTTCGAAAACCTAAGAAAACACCACCGAAACCTAACATCGAACAAAGTTATGCCGATGTGTGTAATAGTTTTACGTCCGCAATAGAAAACATAAATTCTATAGTAAATTCGAAACCTAACAAAATGAAAAGGAAAGTTAAACCGGACCTTCAGCCGGTACCGTCAAGACCGAAAATGATTCACACTCAAAAAACTCGCGTACCCGTCGAGAGCAACGATGGTGGAAAAGTTAGGCATAAAACTAAAACTTTGGTGACGCATACACAGCCTACGGAATTAAAATCGGCAACTGGTGAACGTATACGTCCGAGGACGAAAAACGTCAGTTACCACATTCTTCAATCCGAGAAGTTTCCTTTAGCTACTTTCCCCGAGGAAGATACAGAGCAAGCTGTGAATAATTTAATCGCCAGCGAGGAAACTTTGCATACGCAAAACAACGGAGATTGCGATATTCCCACTGAAGTTGTGAACGAGGAAACTGTAGAAAGTAAGAGTGTACTTACGGGACCTGTACCTACAAATATAATTAAAGTTACAAGGACAAGAACTAAAAGCGATAATAATAAGAAAACGTATAGTTTACGACCGGGAAGGACGATTATTGGTCCTGGTAGTAAAGTCGTAAGACTTCTTAAGGGAGGTATGATCGTATCGAAAAATAAAAAGATAAAAGAAGAAGAACCCGACCCGGAACCGGACAATATTATTCCAGATATGATTTGTGTTTCGCCGACTATTATTAAAGAGGAAATAAAGTTGGACCCGAGTCCTTTGCACGAACTAGCTGAGCTATCGGTGCAACACGCTCAAAACATCTTCAAATGCGAGATGTGTAGCGAGGTATTTTCGGATCGCGAACAATTAGTCGTGCATGTGCCTATCCATATTTGA
Protein Sequence: MDESYTLVWEDGSAVIQTEEVICGIDNDCAILTDSNEFSEVCEEVVIQGNHDRSIENNAQTDNGVMYVTEDDMMVIQQPSEVYTDEQLLEITNEEVVAESWSENCSEIIVGSEENVEEQATDEVEIPLPTDQDQYTAARPYPCDFCSRRFRKKSNLMNHMVAHQTDRPHGCNLCGVRYIRRCDLMNHLKIHAYIPETDGLEDDENQPLDDSDSERQKSKFLKKRKGIKIKKEDDGSNSRSYNYIDEDVKLMEEMESKDYSNYLPQENHPITQPRFPITDPRKPFVCQHCGVGFAREKALASHARVHGGDSPFECRTCEEVFWDIALMREHVRIKHGGIEQNFDDDDDDEDYSDEETKYGEFFCPTCGMSFHRQDNMKRHHRIHIKEELTKDSGFGHICNVCGESFPEALELLAHAEVHARGWEHRCMICGEVFINDQAVASHVLTKHGKNLPPNTCMMCGRTCKDRRTLLKHSFEHSQEKLFGCSKCDKTFHNQARLKRHMISHRNKVVSCEECGEDFPDGRTLMNHRHSHSSVSGRHFPCLECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPNYSHSMTPYSCAVCSDLFATSQDLIVHLIHHCDLNTAMKRQPQVGPRKYKRRRKLKPHEIELMTTRTKDDEDEDPLTDTDDSEYKRKIVRKPKKTPPKPNIEQSYADVCNSFTSAIENINSIVNSKPNKMKRKVKPDLQPVPSRPKMIHTQKTRVPVESNDGGKVRHKTKTLVTHTQPTELKSATGERIRPRTKNVSYHILQSEKFPLATFPEEDTEQAVNNLIASEETLHTQNNGDCDIPTEVVNEETVESKSVLTGPVPTNIIKVTRTRTKSDNNKKTYSLRPGRTIIGPGSKVVRLLKGGMIVSKNKKIKEEEPDPEPDNIIPDMICVSPTIIKEEIKLDPSPLHELAELSVQHAQNIFKCEMCSEVFSDREQLVVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01345905;
90% Identity: iTF_00003969;
80% Identity: -