Basic Information

Insect: Ctenicera cuprea
Gene Symbol: -
Assembly: GCA_958336395.1
Location: OY284491.1:21504877-21515634[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.3e-05 0.0059 18.6 0.7 1 23 144 166 144 166 0.95

2 14 0.0024 0.26 13.4 1.2 3 23 174 194 173 194 0.99

3 14 0.00019 0.021 16.9 0.1 1 23 294 316 294 316 0.98

4 14 0.19 21 7.4 0.1 1 23 322 345 322 345 0.97

5 14 4.3e-07 4.8e-05 25.2 3.4 1 23 370 392 370 392 0.98

6 14 0.0092 1 11.6 0.0 1 23 405 427 405 427 0.94

7 14 0.1 12 8.3 3.7 2 23 464 485 464 485 0.90

8 14 0.00017 0.019 17.0 3.7 3 23 493 513 491 513 0.98

9 14 0.018 2 10.7 0.3 2 23 519 540 518 540 0.96

10 14 1.7e-05 0.0019 20.2 0.4 1 23 548 570 548 570 0.98

11 14 0.0074 0.82 11.9 0.2 3 23 578 598 576 598 0.97

12 14 0.00023 0.026 16.6 0.3 1 23 604 626 604 627 0.95

13 14 0.51 57 6.1 0.2 1 23 641 663 641 663 0.96

14 14 5.3e-05 0.006 18.6 1.4 1 23 996 1018 996 1018 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.3e-05	0.0059	18.6	0.7	1	23	144	166	144	166	0.95
2	14	0.0024	0.26	13.4	1.2	3	23	174	194	173	194	0.99
3	14	0.00019	0.021	16.9	0.1	1	23	294	316	294	316	0.98
4	14	0.19	21	7.4	0.1	1	23	322	345	322	345	0.97
5	14	4.3e-07	4.8e-05	25.2	3.4	1	23	370	392	370	392	0.98
6	14	0.0092	1	11.6	0.0	1	23	405	427	405	427	0.94
7	14	0.1	12	8.3	3.7	2	23	464	485	464	485	0.90
8	14	0.00017	0.019	17.0	3.7	3	23	493	513	491	513	0.98
9	14	0.018	2	10.7	0.3	2	23	519	540	518	540	0.96
10	14	1.7e-05	0.0019	20.2	0.4	1	23	548	570	548	570	0.98
11	14	0.0074	0.82	11.9	0.2	3	23	578	598	576	598	0.97
12	14	0.00023	0.026	16.6	0.3	1	23	604	626	604	627	0.95
13	14	0.51	57	6.1	0.2	1	23	641	663	641	663	0.96
14	14	5.3e-05	0.006	18.6	1.4	1	23	996	1018	996	1018	0.99

Sequence Information

Coding Sequence: ATGGAGGAGAGTTACACTCTCGTGTGGGAGGATGATAGCACGGTAGTGCAAAATGAGGAGGTTATTTGTGGAATTGATAACGATTGCACCATCCTGCCAGCTGAAGCCGGTGAATTCGCAGATGTCTGCGAAGAAGTTGTCGTTCAAGGCAACCATGATCAAGAGATAGCAAGCAATGGAGAAACCCAAGCTGGCAGTATTATGTATGTAACTGAAGATGACATGATGGTCATGCAGCAATCTTCTGAGATACCCTTCGAAGAAGAACAGTTCGTAGAAATATCCACAGAAGAAGTTGTTGCTGAACCATGGAGCGAAAACTGCCCAGAAATTGTTGTCGGATCAGAAGAGCATATTGAAGAGCAACCTTCTGATGATGTGGAAATTCCTCTACCAACAGACCAAGATCAATACACTGCAGCACGTCCTTATCCGTGTGATTTTTGCAGTCGTCGTTTCAGAAAGAAGGCAAATCTCATGAACCATATGGTAGCTCACCAAACGGATCGCCCACATGGTTGTAATTTGTGTGGTGTCCGCTATATCCGCAAATGCGACCTCATGAATCATCTTAAAATCCATGCTTACATACCGGAACCAGATGGCCTGGATGAAGAAGATTCACAGACAATGGACGAGTCGGATTCTGAAAAAATTCTCAAGAGGCCCAAGCCTTTTATGAAGAaacgcaaaaataaaattagaataaagGAAGATCAAGATGAGCGAGCAGCGTCAAGTTCCCGTTCTTATGATTATGTTGATGAAGATGTGCGGCTTATGGAAGCAATGGAAAATAATACCAGTAGTAGATCTGATTATTCTAATCATCCTGTACCGGCAGAACCAAGATTTCCCATTAGTGACCCTCGCAAGCCCTTTGTTTGTCAGCACTGTGGTGTTGGATTTGCTAGAGAGAAAGCATTAGCTTCTCATGCACGTGTGCATGGAGGTGATAGTCCATTTGAATGTCGGACTTGTGAGGAAGTTTTTTGGGATATTGGTCTTTTGCGTGAACATGTACGCATTAAACATGGAGGTGTTGAACAAAACTTTGATGAAGATGATGATGAGGATTATTCAgATGAGGAAACGAAATATGGTGAATACTTCTGCCCAACTTGTGGCACCTCATTTCACAGACAAGACAACCTGAAACGTCACCAGCGAATACACATCAAAGAAGAAATAACGAAAGAAGTAGGATTTGGTCATATTTGCAATGTTTGCGGAGAATCCTTTCCAGAAGCCCTGGAACTTCTTGCCCATGCTGAAGTGCATGCAAGAGGTTGGGAACACCGTTGCATGATTTGTGGAGAGCTCTGTGTGGATGACCAAGCAGTGGCAGCTCATGTTCAAGCCAAACACGGCAAGAACTTACCCCCGAACACTTGTATGATGTGTGGGCGTACGTGTAAAGATCGCCGTACTCTCTTAAAGCACTCCTTTGAGCATTCCCGTGAGAAGTTATTTGGTTGCTCTAAGTGTGACAAGACGTTCCACAACAAAGCTCGTTTGAAAAGGCACATGATTTCGCACAGAAATAAAGTGGTGTCATGCGTGGACTGTGGTGAAGATTTTCCTGATGGCCGGTCTTTAATGAATCATAGGCACAGTCATAGTAGTGTGTCCGGTCGTCACTTTCCATGTAGAGAATGTGGGAAAACTTTTGGATCCAGGAGCTCTCAACAAATTCATATCAGGATTCATACTGGGGAGAGGCCTTATGGTTGCAGGTTTTGCTGGAAGGCCTTTGCCGATGGTGGTACTTTACGCAAACATGAACGCATCCATACAGGAGAGAAGCCATATGCTTGTGCTGTTTGCCCTCGAGCTTTCAACCAGCGAGTGGTTCTGAGAGAACATATTCGTTCTCATCATTCTGGACCTGATCCAAATTATAGTCATAGCATGACTCCATACTCTTGTGCTGTGTGCTCTGATCTATTTGCTACCTCTCAGGATTTAATTGTCCATTTGATTCATCACTGTGACTTGAATACTGCGATGAAGAGACAACCCCAGGTAGGGCCTAGGAAGTACAAGAGGAGACGTAAGTTGAAACCCCATGAATTACAGATGATGACATCGCGTAATGACGACGATGAAGACGACCATATGAGTGATTCCGACAATGAACAcgaatacaaaagaaaaattgtcaAGAAACCCAAGAAAACACCTCCGAAAACCAACATTGAGGAAAGTTACGCTGATGTCTATAACAGTTTCACGTCTGCCATAGAAACAGTAAACTCAATTGTAAACTCAAAACCAAATAAGATGaagagaaaaatcaaaactGAACCTCAGATTGTGCCCTCAAGACCCAAGATGATTCATACTCAGAAAACTAGAGTACCTGTAGAAACTATTGATGGAGGAAAAGTGCGCCATAAAACTAGAACGTTAGTTACTCACACACAGCCTACCGAATTAAAATCGGCAACTGGAGAACGGATGCGTCCGCGCACCAAAAATGTTAGCTACCACATTCTTCAATCTGAAAAATTCCCGGTGGCAACATTTCCTGAAGATGACACTGAACAAGCGGTGAATAATCTTCTAGCAAGTGATACAACTTTGCAGGACAATGAAACTGATCATAACAATATCCAAAGCAATGGAATTATTGATACTCCTCCAGATATTGCCAGTGAACAAACCGTTGAAACGGATGTACCGGTACCGACAAATATAATCAAAGTTACTACAACCAGtagtaaaaattacaagaaaaagaCTTATAGTTTAAGACCAGGGCGGACCATTATTGGACCTGGCAGTAAAGTAGTTCGACTTGTTAAGGGTGGTATGATCGTAtcgaaaaataagaaaataaaagaagaactgGAAGTAGAACCCGAAAAAATCACTCCAGATTTAGGCACTGAATTCACCCCCGTGGTGAAACAGGAGGTGATAGTCGATCCCAGCCCATTACATGAGCTGGCCGAACTGTCGGTGCAACATGCtcaaaatatattcaaatgcGAAATGTGTAGTGAAGTGTTTTCTGATCATAAGCAACTCTCAGAGCATGTGCGTATACACATCTGA
Protein Sequence: MEESYTLVWEDDSTVVQNEEVICGIDNDCTILPAEAGEFADVCEEVVVQGNHDQEIASNGETQAGSIMYVTEDDMMVMQQSSEIPFEEEQFVEISTEEVVAEPWSENCPEIVVGSEEHIEEQPSDDVEIPLPTDQDQYTAARPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGVRYIRKCDLMNHLKIHAYIPEPDGLDEEDSQTMDESDSEKILKRPKPFMKKRKNKIRIKEDQDERAASSSRSYDYVDEDVRLMEAMENNTSSRSDYSNHPVPAEPRFPISDPRKPFVCQHCGVGFAREKALASHARVHGGDSPFECRTCEEVFWDIGLLREHVRIKHGGVEQNFDEDDDEDYSDEETKYGEYFCPTCGTSFHRQDNLKRHQRIHIKEEITKEVGFGHICNVCGESFPEALELLAHAEVHARGWEHRCMICGELCVDDQAVAAHVQAKHGKNLPPNTCMMCGRTCKDRRTLLKHSFEHSREKLFGCSKCDKTFHNKARLKRHMISHRNKVVSCVDCGEDFPDGRSLMNHRHSHSSVSGRHFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPNYSHSMTPYSCAVCSDLFATSQDLIVHLIHHCDLNTAMKRQPQVGPRKYKRRRKLKPHELQMMTSRNDDDEDDHMSDSDNEHEYKRKIVKKPKKTPPKTNIEESYADVYNSFTSAIETVNSIVNSKPNKMKRKIKTEPQIVPSRPKMIHTQKTRVPVETIDGGKVRHKTRTLVTHTQPTELKSATGERMRPRTKNVSYHILQSEKFPVATFPEDDTEQAVNNLLASDTTLQDNETDHNNIQSNGIIDTPPDIASEQTVETDVPVPTNIIKVTTTSSKNYKKKTYSLRPGRTIIGPGSKVVRLVKGGMIVSKNKKIKEELEVEPEKITPDLGTEFTPVVKQEVIVDPSPLHELAELSVQHAQNIFKCEMCSEVFSDHKQLSEHVRIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01345905;
90% Identity: iTF_00789584;
80% Identity: -