Sgra011800.1
Basic Information
- Insect
- Scaptomyza graminum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018901835.1
- Location
- JAEIFL010000277.1:7996909-8008826[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5e-09 2.8e-06 26.7 0.0 2 44 400 443 399 444 0.88 2 3 4.3 8.3e+03 -3.6 0.2 1 11 534 544 534 544 0.84 3 3 8.5e-19 1.6e-15 56.3 0.0 1 43 900 943 900 945 0.95
Sequence Information
- Coding Sequence
- ATGCCGCTCCACTTATGCGCCGGAATGAGCAGCCGGTTGCAGTTGCAGCTGCTGCTGCTGCAACTGGCGCCTGCTGTGGCACACTTGAGGTGCCAGCCAGAGCTAGCCAATGCACGCACCCCGATTCTGCACGCACTGCACGCACTTTTGCGCAATCAGGACACACACAGAGCGGGGCATAAGCCGGGCAAGGACAAGAGGGGCGCCGACGAACTGACGCACCTGACTGGCTTAGAACGCGTCGCTGAGGAATTCATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAGCCAATTGAATATCGACGAGCAACAGCCCATATCACTACTAACGACGTTAGAAACAGAAGACAGCGACTATCAGAAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAACATTGCAACAACAACAACAGCAGCAACGGAACACTGCAATTTGAAGAAGATTTTGACAACAACCACACATCACACGACCACGACTCAAGTGCAACATCACGTAGTAGCTCCGGCTCACCATCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGATTGCTAACAGTGAACGCTAAAGGCGAATTGGTGGCCGAAACAACGGCAACCGCGTCCACACACAATTGTAACAACAACAACAACGTCATAGCTGAGCATCAGCACGACAGCGACAGCAACTCGAGCGCATCACTGCACAATAGCTCCACAAATATCAACAACAAAAACAATAATACCAACAACACCAAGCATAGAGCACGCAACGGAACAAACGCTGTGACGACTTCATCATCAGCGAGTACAATAGAACTTTACAAGCTGTTCACCCAGCAAGCAGCAGAAATGACATCGATGGAATCAATGGCCGCCAAACTGGCACAGTTTACAATGATGGCCGATTTCAATTTGATGAGCACGCTGGCCAATCAACAACAACAGCAACAACAACATGCTAACTCGGTAACACCAACTACCTCGGAAGTATCTGCCGCTGCCGCCAGTCCCGCACTTAAAGATACACCCAGTCCCAGTGTTGATGCACCCTTGGATCTAAGCAGCAAACCATCGCCAAATTCATCAATAAGCGGCGATATAAAGACAGCCAGAGCTTTGTCTGAGTGTGCCACTCCGGTTTCAGCAGCCCGACACAACTACAGTCATGAGGATCTGAATAGTGCTCTGCAGGATGTTCTGGTCAGTAAGCTGGGCACACGCAAAGCATCCAAAGAGTACCATATGCCGCGCACCACGCTGCGCAACAAACTGTGCAAAATGTCCCTGGATGCAAAGAGACCAAATGCGCAAACGCCGCCAGAGTTGCAACAGCTGCAACACTACCTGGATCTGGAGCATGACGAACAGTCTGGCGAGGAGGCTGGCGACGGCGATAGTAATGCGTCGACGCCAGCGCCAGGCTTTCAAGAGATTGCCCAACGCATTGTGGCCAACGAGCATCTGCGCAAGCTGAGCACCATGTCCGAGCACAATGGCAGCGAGCTGGGCGATGATCTCGAGCCCGCAATGTCACCAAAGTCGTCGCGGACGCCTCAGCGAGATGGCACACCAACGAGCATGCAAGCGGCAGCGGCAGCAGCAGCAGCTGCGGCAGCGGGTGGTAACAACAATGCCACCGGACTGCCAATGCCCATTGATGCCAATGTGCTGTTGCATGCACTGGTTCTTGCATCAGGCATTGGTGTCATACCCAAGCTGGACGAGACGCAGACGCTGGGTGATCTGTTCAAATCGCTGCTGATGGCCAACAGTGGCGGCATGATGAATGAGACGTTGACATCTGGGCACGAGAGCAATGGCAGTTCCACGCAGCTGGATCAGCGCCTGTTACAGCAGCAGCAACAGCAGCAACTAGCTGCTGCCTATCGTCGTCATCTACCAAAGTCTGAAACGCCTGAGACGAGCTCCTCGCTGGATGCCAATGAGGCGTGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGCGCACCGAGCGTCTCGCCCACGTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGTTGTCGCCATCACCAACATCGATACAAAAGATGATGGCCAACACCATACAGCGCAAGATCAATGAGCAGAGCAGCCAGGATTGTCTGCGCAACAATGGCAACACAAGCGGCAGCGAGTGCAGCAGCAGCGGTGGCGGCAACAGCAGTGCGAGTCGCAAGCCCAGCATATCGGTGGCCAAAATGATTGGTGGCACAGACACCTCACGTTTTGGTGCCTCGCCTAATCTGCTTGCGCAACAACATCACAGTCATCTGCCACCCGCACATCATCCTGCCCACCAGCAGCAACAGCAGCAGCAGCAGCAACAGCATCCGCATCAACATCCACATCCGCATCCGCATTCGCATCAACATCAGCAGCTCAGTGCTCAGGATGCAGCGGCACTGGCAGCCGGCAAGGGCACGCGACCGAAGCGTGGTAAGTACCGCAACTACGACAGAGACAGTCTAGTCGAGGCTGTCAAGGCTGTGCAACGTGGCGAGATGTCTGTGCATCGGGCTGGTAGCTATTACGGTGTGCCGCACTCAACGCTGGAGTACAAGGTGAAGGAGCGGCATTTGATGCGGCCGCGCAAAAGAGAGCCCAAACCGCAACCAGATCTCGTGGGGCTGACAGGAGCAGCGAATAAGATAAGCTTGACCGCTCTGAATAATCTGGACAAACTCAAGGCCGGCAGCGGCAGCAATGCCAACAATAGCTCTGGGTCGAAGCTGAGCAATGCTTTAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGTGCCCAATGGCATTAAATTGCCCATGTTTGATACCGCACCGCAATTGTCCTTTCAGCCAAACATGTTCTGGCCACAGCCAAATGCTGGTGCCAACTATGGCCTGGACTTTAATCGCAATCCCGAATTTATTAAGTCACATCTGGCCGAGGTAATGCGCAACAGTCAGCTGGGCGTGGCGGGTAATCATCATGGCCATGGTGGCGCCGGTGGTCACATGAAGAGTGCTTTGGAGTTTGCCGAGAACATGTACGATGGCATCATCCGGAAGACGCTGAAGAACGATGTGAACGATGTTAGCGGCAATAGTGGCAGTGGCAATGGCAATGCGCTGCTGGATCAGTTGCTGGTTAAGAAAACACCGCTGCCATTTACAAATAATCGCAGCAATGACTACCTTGGTGCCGCCTGTTCCACATCCGAAAGCGTTAAACGTGCCGGCAGTCCGATGGGCGCCTATTCAGATATTAAACGTGAACGTCTCAGTCCGATGCGAAGTGCGGAAAGTGGCAGCAGTGATGATGATCTTGAGCATTCCATTAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAATGACATCACGCGACTCAGAAACGGACGCAAGCAGTTTGAAAAGCGAACAATCGCACAGCTCCTTGCCCGCCAATAACAAAATGATGGATCTCAATGGCAGCAACAGTGTCAAATTCGATTCGGAGCCGCTGCAACCGTCAGCGCATATCTCGCCCAACACCTCCATATTGCACGAGAAGCTGGCACAGATTAAGGCCGAGCAGGCCGAAGTTCATGCGGCGAACACCGAGGAGCAGTTATAG
- Protein Sequence
- MPLHLCAGMSSRLQLQLLLLQLAPAVAHLRCQPELANARTPILHALHALLRNQDTHRAGHKPGKDKRGADELTHLTGLERVAEEFMGRRKWKHYQDQLTRSQLNIDEQQPISLLTTLETEDSDYQKPLNHRLAQPNGQHCNNNNSSNGTLQFEEDFDNNHTSHDHDSSATSRSSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNAKGELVAETTATASTHNCNNNNNVIAEHQHDSDSNSSASLHNSSTNINNKNNNTNNTKHRARNGTNAVTTSSSASTIELYKLFTQQAAEMTSMESMAAKLAQFTMMADFNLMSTLANQQQQQQQHANSVTPTTSEVSAAAASPALKDTPSPSVDAPLDLSSKPSPNSSISGDIKTARALSECATPVSAARHNYSHEDLNSALQDVLVSKLGTRKASKEYHMPRTTLRNKLCKMSLDAKRPNAQTPPELQQLQHYLDLEHDEQSGEEAGDGDSNASTPAPGFQEIAQRIVANEHLRKLSTMSEHNGSELGDDLEPAMSPKSSRTPQRDGTPTSMQAAAAAAAAAAAGGNNNATGLPMPIDANVLLHALVLASGIGVIPKLDETQTLGDLFKSLLMANSGGMMNETLTSGHESNGSSTQLDQRLLQQQQQQQLAAAYRRHLPKSETPETSSSLDANEACEDPILKIPSFKVSGAPSVSPTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSPSPTSIQKMMANTIQRKINEQSSQDCLRNNGNTSGSECSSSGGGNSSASRKPSISVAKMIGGTDTSRFGASPNLLAQQHHSHLPPAHHPAHQQQQQQQQQQHPHQHPHPHPHSHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLDKLKAGSGSNANNSSGSKLSNALKXXXXXXXXXXXXXXXXXXXSVPNGIKLPMFDTAPQLSFQPNMFWPQPNAGANYGLDFNRNPEFIKSHLAEVMRNSQLGVAGNHHGHGGAGGHMKSALEFAENMYDGIIRKTLKNDVNDVSGNSGSGNGNALLDQLLVKKTPLPFTNNRSNDYLGAACSTSESVKRAGSPMGAYSDIKRERLSPMRSAESGSSDDDLEHSINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMTSRDSETDASSLKSEQSHSSLPANNKMMDLNGSNSVKFDSEPLQPSAHISPNTSILHEKLAQIKAEQAEVHAANTEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01324031; iTF_01327810; iTF_01320388; iTF_01326315; iTF_01325585;
- 90% Identity
- -
- 80% Identity
- -