Spol001343.1
Basic Information
- Insect
- Scaptomyza polygonia
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035044585.1
- Location
- JAWNNU010000151.1:5881623-5895188[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-09 2.7e-06 27.6 0.0 2 44 339 382 338 383 0.88 2 3 0.12 2.8e+02 1.9 0.3 1 15 473 487 473 489 0.91 3 3 1.2e-18 2.8e-15 56.3 0.0 1 43 840 883 840 885 0.95
Sequence Information
- Coding Sequence
- ATGTCAACGTGGCTAAAAGTCGAAGCTGTCCCTTGGGAGGAGGCTTGCTTAGAACGCGTCGCTGAGGAATTCATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAGCCAATTGAATATCGACGAGCAACAGCCCATATCACTAACGACGTTAGAAACAGAAGACAGCGACTATCAGAAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCaacattacaacaacaacaacagcagcagcggaaCATTGCAATTTGAAGAAGAAGATTTTGACAACAACCACACATCACACGACCACGACTCAAGTGCAACATCACGTAGTAGCTCCGGCTCACCATCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGATTGCTAACAGTGAACGCTAAAGGCAAATTGGTGGCCGAAACAACGGCAACCGCGTCCATACACAattgtaacaacaacatcatagCTGAGCATCAGCacgacagcgacagcagctCGAGCGCATCACTGCACAATAGCTGCagaaatatcaacaacaaaaacaataaaaagaataacaacaacaacaacaagcataGAGCACGCAACGGAACAAACGCTGTCTCGACTACATCATCAGCGAGTACAATAGAACTTTACAAGCTGTTCACCCATCAAGCAGCAGAAATGACATCGATGGAATCAATGGCCGCCAAACTGGCACAGTTTACAATGATGGCCGATTTCAATTTGATGAGCACGCTTgccaatcaacaacaacaacaacaacatgctaACTCGGTAACACCAACTACCTCGGAAGTATCTGCCGCTGCCGCCAGTCCCGCACTTAAAGATACTCCCAGTCCCAGTGTTGATGCGCCCTTGGATCTAAGCAGCAAACCATCGCCAAATTCATCAATTAGCGGCGATATAAAGACAGCCAGAGCTCTGTCTGAGTGTGCCACGCCCGTTTCAGCAGCCCGGCACAGCTACAGTCATGAGGATCTGAACAGTGCGCTGCAGGATGTCCTGGTCAGTAAGCTGGGCACACGCAAAGCATCTAAGGAGTACCATATGCCGCGCTCCACGCTGCGCAATAAACTGTGCAAAATGTCCCTTGATGCAAAAAGGCCAAATGCGCAAACGCCGCCAGagttgcagcagctgcaacactACCTGGATCTGGAGCATGACGAACAGTCGGGCGAGGAGGCTGGCGATGGCGATAGTAATGCATCAACGCCAGCGCCAGGCTTTCAAGAGATTGCCCAGCGCATTGTGGCCAACGAGCATCTGCGCAAGCTGAGCACCATGTCCGAGCACAATGGCAGCGAGCTGGGCGATGATCTCGAGCCCGCCATGTCACCAAAGTCATCGCGGACGCCACAGCGAGATGGCACACCAACGAGCATgcaagcggcagcagcagctgtggcAGCGGGTGCTAACAACAATGCCACCGGACTGCCAATGCCCATTGATGCCAATGTGCTGTTGCATGCACTGGTTCTTGCATCGGGGATTGGTGTCATACCCAAGCTGGACGAGACGCAGACGCTGGGTGATCTGTTCAAATCGCTGCTGATGGCCAACAGTGGCGGTATGATGAATGAGACGCTGACATCAGGGCACGAGAGCAATGGCAGTTCCACGCTGCTTGATCAGCGCttgttgcaacagcagcaacagcaacaactagcTGCTGCCTATCGTCGTCATCTACCAAAGTCTGAAACGCCCGAGACGAGCTCCTCGCTGGATGCCAATGAGGCGTGTGAGGATCCCATACTGAAGATTCCGTCCTTTAAGGTCAGCGGTGCACCGAGCGTCTCGCCAACGTTAcgttgcagcaacagcagcaatagcatgactagcaacaacaacaataacaatgccaacaacaataacaacaacaacaacaacaacagctcaaACAGTAGCAATCGCAATGGCGATCACAGTCCTCACTCTGCCTCACCAATGCtcgcagcagcagttgctgcCGCAGCggccaacaacaattacagacaaagcggcggcggcagcaagaacagcagcaacaatctGTTGTCACCATCGCCAACATCGATACAAAAGATGATGGCCAACACCATACAGCGCAAGATCAATGAGCAGAGCAGCCAGGAATGTCTGCGGAACAACGGCAACACGAGTGGCAGCgagtgcagcagcagcggtggCGGCAACAGCAGTGCGAGTCGCAAGCCCAGCATATCGGTGGCCAAAATGATTGGTGGCACGGACACCTCACGTTTTGGTGCGTCACCTAATCTGCTTGCGCAACAACATCATGGTCATCTGCCACCCACACATCATCCTGcccaccagcaacagcagcaacagcagcagcagcaacagcatccgCATCAACATCCGCATTCGCATTcacatcagcatcagcagctcAGTGCTCAGGATGCAGCGGCGCTGGCAGCTGGCAAGGGCACGCGACCGAAGCGTGGTAAGTACCGCAACTACGACAGAGACAGTCTAGTCGAGGCTGTCAAGGCTGTGCAACGTGGCGAGATGTCTGTGCATCGGGCTGGTAGCTATTACGGCGTGCCGCACTCAACGCTAGAGTACAAGGTGAAGGAGCGACATTTGATGCGGCCGCGCAAAAGGGAGCCCAAACCACAACCAGATCTAGTGGGGCTGACAGGAGCAGCAAATAAGATAAGCTTGACCGCATTGAATAATCTGGACAAACTCAAGGCCAGCGGCGGCAGCAATGCCAACAATAGCTCTGGCTCGAAACTGAGCAATGCTttaaagagcagcagcagcagcagtgcagcaagtgcagcagcagcagcagcagcggcggcagcatcGGTGCCCAATGGCATTAAGTTGCCCATGTTTGATGCCGCACCGCAAATGTCCTTTCAGCCAAACATGTTCTGGCCACAGCCAAATGCTGGTGCCAACTATGGCCTGGACTTTAATCGCAATCCCGAATTTATTAAGTCACATCTGGCCGAGGTAATGCGCAACAGTCAGCTGGGCGTGGCGAGCAATCATCATGGCCATGGTGGCGCCGCTGGTCACATGAAGAGTGCACTGGAGTTTGCCGAGAACATGTACGATGGCATCATCCGGAAGACGCTCAAGAACGATGCGAACGATGTAAGCGGCAATAGTAGCAGTGGCAATGGCAATAACAACGCGCTGCTGGATCAATTGCTGGTTAAGAAAACACCGCTGCCATTTACAAATAATCGCAGCAATGACTACCTCGGTGCCGCCTGTTCCACATCCGAAAGCGTTAAACGTGCCGGCAGTCCGATGGGCGCCTATTCAGATATTAAACGTGAACGTCTCAGTCCGATGCGAAGTGCGGAAAGTGGCAGCAGTGATGATGATATTGAGcattccaacaacaacaacaataacaataatagtGATCTGGCgcacaacaagaacaataacaacaataacaataacaacaacaataacggcagaagcagcaacaatgaaaatggccgcagccgaatgacatcgcgTGACTCAGAAACGGACGCAAGCAGTTTGAAAAGCGAACAATCGCACAGCTCCTTGCAAGCCAATAACAAAATGATGGATCTCAATGGCAGCAACAGTGTCAGATTCGAGTCGGAGCCGTTGCAACACGCAGCGCAAATCTCGCCTAACACCTCCATATTGCACGAGAAGCTGGCACAGATCAAGGCCGAGCAGGCCGAAcaacagcaacagcagcagcagcatatgGTGGCACCAACATTTGCGTGGCCACCGCTGGCCACACATTACTATAGTTTCTAG
- Protein Sequence
- MSTWLKVEAVPWEEACLERVAEEFMGRRKWKHYQDQLTRSQLNIDEQQPISLTTLETEDSDYQKPLNHRLAQPNGQHYNNNNSSSGTLQFEEEDFDNNHTSHDHDSSATSRSSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNAKGKLVAETTATASIHNCNNNIIAEHQHDSDSSSSASLHNSCRNINNKNNKKNNNNNNKHRARNGTNAVSTTSSASTIELYKLFTHQAAEMTSMESMAAKLAQFTMMADFNLMSTLANQQQQQQHANSVTPTTSEVSAAAASPALKDTPSPSVDAPLDLSSKPSPNSSISGDIKTARALSECATPVSAARHSYSHEDLNSALQDVLVSKLGTRKASKEYHMPRSTLRNKLCKMSLDAKRPNAQTPPELQQLQHYLDLEHDEQSGEEAGDGDSNASTPAPGFQEIAQRIVANEHLRKLSTMSEHNGSELGDDLEPAMSPKSSRTPQRDGTPTSMQAAAAAVAAGANNNATGLPMPIDANVLLHALVLASGIGVIPKLDETQTLGDLFKSLLMANSGGMMNETLTSGHESNGSSTLLDQRLLQQQQQQQLAAAYRRHLPKSETPETSSSLDANEACEDPILKIPSFKVSGAPSVSPTLRCSNSSNSMTSNNNNNNANNNNNNNNNNSSNSSNRNGDHSPHSASPMLAAAVAAAAANNNYRQSGGGSKNSSNNLLSPSPTSIQKMMANTIQRKINEQSSQECLRNNGNTSGSECSSSGGGNSSASRKPSISVAKMIGGTDTSRFGASPNLLAQQHHGHLPPTHHPAHQQQQQQQQQQQHPHQHPHSHSHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLDKLKASGGSNANNSSGSKLSNALKSSSSSSAASAAAAAAAAAASVPNGIKLPMFDAAPQMSFQPNMFWPQPNAGANYGLDFNRNPEFIKSHLAEVMRNSQLGVASNHHGHGGAAGHMKSALEFAENMYDGIIRKTLKNDANDVSGNSSSGNGNNNALLDQLLVKKTPLPFTNNRSNDYLGAACSTSESVKRAGSPMGAYSDIKRERLSPMRSAESGSSDDDIEHSNNNNNNNNSDLAHNKNNNNNNNNNNNNGRSSNNENGRSRMTSRDSETDASSLKSEQSHSSLQANNKMMDLNGSNSVRFESEPLQHAAQISPNTSILHEKLAQIKAEQAEQQQQQQQHMVAPTFAWPPLATHYYSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01322564;
- 90% Identity
- -
- 80% Identity
- -