Stum006790.1
Basic Information
- Insect
- Scaptomyza tumidula
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035044465.1
- Location
- JAWNNW010000445.1:340407-351174[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-07 0.00019 21.0 0.0 2 45 310 354 309 354 0.91 2 2 9.6e-19 1.7e-15 56.4 0.0 1 43 794 837 794 839 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAGCCAATTGAATATCGCCGAGCAACAGCCCATATCAATCACAACTTTAGAAACAGAAGACAGCGACTATCAGAAGCCACTAAACCACCGTTTAGCGCAGCCCAACGGCAAacattgcaacagcagcaacagcacactGCAATTTGAAGAAGAATTTGacaacaacaacacatcacACGACCACGACTCAAGTGCAACATCACGTAGTAGCTCCGGCTCACCATCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTGAATGCCAAAGGCGAATTAGTGGCCGAAACAACGGCAACCGCGTCTATAAACAATTGTAACAACAACGGCATAGCTGAGCTTCAGcacgacagcgacagcaactcGAGCGCATCACTGCACAATAGCTCCagaaatatcaacaacaacaataagaacaataataataacaacaacaacaacaagcatagAGCACGCAACGGAACAAACGCCGCCACGACGTCATCATCAGCGAGTACAATAGAACTTTACAAGCTATTCACCCAGCAAGCAGCAGAAATGACATCGATGGAATCAATGGCCGCCAAACTGGCACAGTTCACAATGATGGCCGATTTCGATTTGATGAGCAAGCTGgccaatcaacaacaacaacatgctaACTCGGTAACACCAACTACCTCGGAAGTatctgccgccgccgccagtCCCGCACCAAAAGATACATCCAGTCCCAGTGTGGATGCACCCTTGGATCTAAGCAGCAAACCATCGCCAAATTCATCTATTAGCGGCGATATAAAGACAGCCAGAGCTCTGTCTGagtgtgccacgcccatttcAGAAGCACGACACAACTACAGTCATGAGGATCTGAACAGTGCGCTGCAAGACGTGCTGGTCAGTAAACTGGGCGCACGCAAATCATCCAAGGAGTACCATATGCCGCGTTCCACGCTGCGCAACAAGGTGTGCAAAATGTCGCTTGGTGCAAAGCGACCGAATGCGCAAACGCCGCCACAGCTGCAACACTACCTGGACCTGGAGCAGGATGAACAGTCTGGTGAGGAGGCTGGCGACGGCGATAGTAATGCTTCAACGCCAGCGCCAGGCTTTCAAGAAATTGCCCAACGCATTGTGGCTAATGAGCATATGCGCAAGCTGAGCTCCATGTCTGAGCAAAATGGTAGCGAGCTGGGCGATGATCTCGATGCCGCCATGTCGCCAAAGTCATTGCGGACGCCACAGCGAGATGGCACACCAACGGGCATGCAAGCGgtagcggcagcggcagccgttgcggcagcaacagctggtagcaacaacaatgccactGGACTGCCAATGCCCATTGATGCCAATGTGCTGTTGCATGCGCTGGTTCTTGCCTCAGGTATTGGTGTCATACCCAAGCTGGACGAGACACAGACGCTGGGTGATCTATTCAAATCGCTGCTGATGGCCAACAGTGGCGGCATGATTAATGAGACGCTGACATCTGGACACGAGAGCAATGGCAGTGCCACGCTGATCGATCAGCGcctgttgcaacagcagcagcagcagcaagttaATGCTGCCTATCGTCGTCATCTACCAAAGTCTGAAACGCCTGAGACGAGCTCCTCGCTGGATGCCAATGAGGCGTGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGCGCACCAAGCGTCTCGCCCACCCTgcgttgcaacaacagcatgaCTAACAGCGGCAACaccattaacaacaacaactccaacagcagcaatcgcaATGGCGACCACAGTCCACACTCAGCCTCACCAatgctggcagcagcagttgctgccgCAGCCGCCAACAACAGTTATAGACAgagcggtggcggcggcagcaacagcagcagcaacaatctgTTGTCGCCATCGCCAACATCGATACAAAAGATGATGGCCAATACCATACAGCGCAAGATCAATGAGCAAAGCAGCCAGGACAGTCTgcgcaacaatggcaacaccAGCGGCAGcgagtgcagcagcagcggtggcGGCAACAGCAGTGCTAGTCGCAAGCCCAGCATATCGGTGGCCAAAATGATTGGTGGCACAGACACATCACGTTTTGGGGCCTCACCCAATCTGTTATCGCAACAACATCACAGCCATCTGCCACCCGCACATCATCCGGctcaccagcaacagcagcaccattCGCATCAACATTCGCACtcgcatcagcatcagcagcttAGTGCTCAGGATGCAGCAGCGCTGGCAGCGGGCAAGGGAACGCGACCGAAGCGTGGTAAGTACCGTAACTACGATAGAGACAGTCTGGTCGAGGCAGTCAAGGCTGTGCAACGTGGTGAGATGTCTGTGCATCGGGCTGGTAGCTATTATGGTGTCCCGCACTCAACACTAGAGTACAAGGTGAAGGAGCGACATTTGATGCGACCGCGCAAAAGGGAGCCCAAACCACAACCAGATCTCGTGGGGCTGACTGGAGCAGCGAATAAGATAAGCCTGACCGCCCTGAATAATCTGGAAAAGCTCAAGtctggcagcagcaataatgCCAACAATAGCTCCAAGCTGAGCAATGCTTtaaagagcagcagctgcagtgcggcaagtgcagcagcagcagcagcagcggcggcagcatcGGTGCCCAATGGCATTAAATTGCCCATATTTGATGCCGCACCGCAGTTGTCCTTTCAGCCAAACATGTTCTGGCCACAGCCGAATGCTGGCGCCAACTATGGCCTGGACTTTAATCGCAATCCCGAATTGTTCAAGTCACATATAGCCGAGGTGATGCGCAATAGTCAGCTGGGCGTGACGAGCAACCATCATGGCCATGGCGGCGCCGCTGGTCACATGAAGAGTGCTCTGGAGTTTGCCGAGAACATGTACGATGGCATCATTCGGAAGACACTGAAGAACGATGTGAACGATTTGAGCGGCAATAgcagtggcaatggcaatggcaatgcgCTGCTGGATCAGTTGCTGGTGAAGAAGACACCGCTGCCATTTACAAATAATCGCAGCAATGACTACCTCGGTGCTGCCTGTTCCACATCCGAGAGCGTTAAACGTTCCGGCAGTCCAATGGGCGCCTATTCAGATGTTAAACGTGAACGTTTCAGTCCGATGCAAAGTGGGGAGAGTGCCAGCAgtgatgatgatcatgatcactccaataacaacaacaacaatatcaataataatagtgATCTTgcgcacaacaaaaacaataacaacaacaacagcaacaacaacaataacggcagcagcagcaacaatggaAATGGCCGCAGCCGAATGACATCACGTGACTCGGATACGGATGCCAGCAGTTTAAAAAGCGAACAATCGCACAGCTCCTTGCCTCCCAATAACAAAATGATGGATCTCAATGGCAGCAACAGTGTCAAATTCGATTCGGAGCCGCCACAGCAGTTAGCACAAATCTCGCCCAGCACCAGCATATTGCATGAGAAGTTGGCGCAGATTAAGGCCGAACAAGCCGAATTGCATGCGGCTAACACCGAGGAGCAGTTATAG
- Protein Sequence
- MGRRKWKHYQDQLTRSQLNIAEQQPISITTLETEDSDYQKPLNHRLAQPNGKHCNSSNSTLQFEEEFDNNNTSHDHDSSATSRSSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNAKGELVAETTATASINNCNNNGIAELQHDSDSNSSASLHNSSRNINNNNKNNNNNNNNNKHRARNGTNAATTSSSASTIELYKLFTQQAAEMTSMESMAAKLAQFTMMADFDLMSKLANQQQQHANSVTPTTSEVSAAAASPAPKDTSSPSVDAPLDLSSKPSPNSSISGDIKTARALSECATPISEARHNYSHEDLNSALQDVLVSKLGARKSSKEYHMPRSTLRNKVCKMSLGAKRPNAQTPPQLQHYLDLEQDEQSGEEAGDGDSNASTPAPGFQEIAQRIVANEHMRKLSSMSEQNGSELGDDLDAAMSPKSLRTPQRDGTPTGMQAVAAAAAVAAATAGSNNNATGLPMPIDANVLLHALVLASGIGVIPKLDETQTLGDLFKSLLMANSGGMINETLTSGHESNGSATLIDQRLLQQQQQQQVNAAYRRHLPKSETPETSSSLDANEACEDPILKIPSFKVSGAPSVSPTLRCNNSMTNSGNTINNNNSNSSNRNGDHSPHSASPMLAAAVAAAAANNSYRQSGGGGSNSSSNNLLSPSPTSIQKMMANTIQRKINEQSSQDSLRNNGNTSGSECSSSGGGNSSASRKPSISVAKMIGGTDTSRFGASPNLLSQQHHSHLPPAHHPAHQQQQHHSHQHSHSHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLEKLKSGSSNNANNSSKLSNALKSSSCSAASAAAAAAAAAASVPNGIKLPIFDAAPQLSFQPNMFWPQPNAGANYGLDFNRNPELFKSHIAEVMRNSQLGVTSNHHGHGGAAGHMKSALEFAENMYDGIIRKTLKNDVNDLSGNSSGNGNGNALLDQLLVKKTPLPFTNNRSNDYLGAACSTSESVKRSGSPMGAYSDVKRERFSPMQSGESASSDDDHDHSNNNNNNINNNSDLAHNKNNNNNNSNNNNNGSSSNNGNGRSRMTSRDSDTDASSLKSEQSHSSLPPNNKMMDLNGSNSVKFDSEPPQQLAQISPSTSILHEKLAQIKAEQAELHAANTEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01322564;
- 90% Identity
- iTF_01321113;
- 80% Identity
- -