Smon016590.1
Basic Information
- Insect
- Scaptomyza montana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018904305.1
- Location
- JAEIGR010000001.1:17127831-17139626[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-10 1.6e-06 27.8 0.0 2 44 351 394 350 395 0.88 2 2 7.1e-19 2e-15 56.3 0.0 1 43 847 890 847 892 0.95
Sequence Information
- Coding Sequence
- ATGCGCCGGAATGAGCAGCCGGTTGCAATTGCAGCTGCTGCAACTGGCGCCTGCTGTGGCACACTTGAGGTGCCAGCCAGAGGCTTAGAACGCGTCGCTGAGGAATTCATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAGCCAATTGAATATCGACGAGCAACAGCCCATATCACTAACGACGTTAGAAACAGAAGACAGCGACTATCAGAAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAACATTACAACAGCAACAACAACAATAGCAACGGAACATTGCAGTTTGAAGAAGATTTTGACAACAACCACACATCACACGACCACGACTCAAGTGCAACATCACGTAGTAGCTCCGGCTCACCATCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGATTGCTAACAGTGAACGCTGAAGGCGAATTGGTGGCCGAAACAACGGCAACCGCGTCCATAAACAATTGTAACAACAACATAGGCATAGCTGAGTATCAGCACGACAGCGACAGCAACTCGAGCGCATCACTGCACAATAGCTGCAGAAATACAAACAACAAAAACAATAAAAACAACAACAAGCATAGAGCACGCAACGGAACAAACGCTGTCACGACTCCATCATCAGCGAATACAATAGAACTTTACAAGCTGTTCACCCAGCAAGCAGCAGAAATGACATCGATGGAATCAATGGCCGCCAAACTGGCACAGTTTACAATGATGGCCGATTTCAATTTGATGAGCACGCTGGCCAATCAACAGCAACAACAACAACAACAACAACATGCTAACTCGGTAACACCAACTACCTCGGAAGTATCTGCCGCTGCCGCCAGTCCCGCACTTAAAGATACACCCAGTCCCAGTGTGGATGCGCCCTTGGATCTAAGCAGCAAACCATCGCCAAATTCATCAATTAGCGGCGATATAAAGACAGCCAGAGTTCTGTCTGAGTGTGCCACGCCTGTTTCAGCAGCCCGACACAGCTACAGTCATGAGGATCTGAATAGTGCTCTGCAGGATGTCCTGGTCAGTAAGCTGGGCTCACGCAAAGCATCCAAGGAGTACCATGTGCCGCGCACCACGCTGCGCAACAAACTGTGCAAAATGTCCCTGGATGCAAAAAGACCAACTGCGCAAACGCCGCCAGAGTTGCAACAGCTGCATCACTACCTGGCTCTGGAGCATGACGAACAGTCTGGCGAGGAGGCTGGCGATGGCGATAGTAATGCGTCAACGCCAGCGCCAGGCTTTCAAGAGATTGCCCAGCGCATTGTGGCCAACGAGCATCTGCGCAAGCTGAGCACCATGTCCGAGCACAATGGCAGCGAGCTGGGCGATGATCTCGAGCCCGCCATGTCACCAAAGTCCTCGCGGACGCCACAGCGAGATGGCACACCAACGAGCATGCAAGCGACAGCGGCAGCAGCAGCTGGAGCAGCGGGTGGTAACAATAATGCCACCGGACTGCCAATGCCTATTGATGCCAATGTGCTGTTGCATGCACTAGTTCTTGCATCAGGCATTGGTGTCATACCCAAGCTGGACGAGACGCAGACGCTAGGTGATCTGTTCAAATCGCTGCTGATGGCCAACAGTGGCGGCATGATGAATGAGACGCTGACATCTGGGCACGAGAGCAATGGCAGTTCTGCGCTGCTGGATCAGCGCCTGTTGCAACAGCAGCAACAGCAGCAACTAGCTGCTGCCTATCGTCGTCATTTACCAAAGTCTGAAACGCCCGAGACGAGCTCCTCGCTGGATCCCAATGAGGCGTGCGAAGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGCGCACCGAGCGTCTCGCCCACGTTACGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGTTGTCGCCATCGCCAACATCGATACAAAAAATGATGGCCAACACCATACAGCGCAAGATCAACGAGCAGAGCAGCCAGGATAGTCTGCGCAACAATGGCAACACCAGCGGCAGCGAGTGCAGCAGCAGCGGTGGCGGCAACAGCAGTGCGAGTCGCAAGCCCAGCATATCGGTGGCCAAAATGATTGGTGGCACAGACACCTCACGTTTTGGTGCCTCGCCTAATCTGCTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGACCAAAGCGTGGTAAGTATCGCAACTACGACAGGGACAGTCTAGTCGAGGCTGTCAAGGCTGTGCAACGTGGCGAGATGTCTGTGCATCGGGCTGGTAGCTATTACGGTGTGCCGCACTCAACGCTGGAGTACAAGGTGAAGGAGCGACATTTGATGCGACCGCGCAAAAGGGAGCCCAAACCGCAACCCGATCTCGTGGGGCTGACAGGAGCAGCGAATAAGATCAGCTTGACCGCATTGAATAATCTGGACAAACTCAAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGTGCCCAATGGCATTAAGTTGCCCATGTTTGATGCTGCACCGCAATTGTCCTTTCAGCCAAACATGTTCTGGCCACAGCCAAATGCTGGTGCCAACTACGGCCTGGACTTTAATCGCAATCCCGAATTTATTAAGTCACATCTGGCCGAGGTTATGCGCAACAGTCAGCTGGGCGTGGCAAGCAACCATCATGGCCATGCTGGCGCCAGTGGCCACATGAAGAGTGCACTGGAGTTTGCCGAGAACATGTACGATGGCATCATCCGTAAGACGCTGAAGAACGATGTGAACGATGTTAGCGGCAATAGCAGCAGTGGCAATGGCAATGGCAATGCGCTGCTGGATCAGTTGCTGGTTAAGAAAACACCGCTGCCATTTACCAATAATCGCAGCAATGACTACCTCGGTGCCGCCTGTTCCACATCCGAAAGCGTTAAACGTGCCGGCAGTCCGATGGGCGTCTATTCAGATATTAAACGTGAACGACTCAGTCCGATGCGAAGTGCGGAAAGTGGCAGCAGTGATGATGATCTTGAGCATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAAATGGCCGCAGCCGAATGACATCACGCGACTCAGAAACGGACGCAAGCAGTTTGAAAAGCGAACAATCGCACAGCTCCTTGCCTGCGAATAACAAAATGATGGATCTCAATGGCGGCAACAGTGTCAAATTCGAGTCGGTGCCGCTGCAACAGGCAGCGCAAATCTCGCCCAGCACCTCCATATTGCACGAGAAGCTGGCACAGATAAAGGCCGAGCAGGCCGAAGTTCATACGGCCAACACCGAGAAGCAGTTATAG
- Protein Sequence
- MRRNEQPVAIAAAATGACCGTLEVPARGLERVAEEFMGRRKWKHYQDQLTRSQLNIDEQQPISLTTLETEDSDYQKPLNHRLAQPNGQHYNSNNNNSNGTLQFEEDFDNNHTSHDHDSSATSRSSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNAEGELVAETTATASINNCNNNIGIAEYQHDSDSNSSASLHNSCRNTNNKNNKNNNKHRARNGTNAVTTPSSANTIELYKLFTQQAAEMTSMESMAAKLAQFTMMADFNLMSTLANQQQQQQQQQHANSVTPTTSEVSAAAASPALKDTPSPSVDAPLDLSSKPSPNSSISGDIKTARVLSECATPVSAARHSYSHEDLNSALQDVLVSKLGSRKASKEYHVPRTTLRNKLCKMSLDAKRPTAQTPPELQQLHHYLALEHDEQSGEEAGDGDSNASTPAPGFQEIAQRIVANEHLRKLSTMSEHNGSELGDDLEPAMSPKSSRTPQRDGTPTSMQATAAAAAGAAGGNNNATGLPMPIDANVLLHALVLASGIGVIPKLDETQTLGDLFKSLLMANSGGMMNETLTSGHESNGSSALLDQRLLQQQQQQQLAAAYRRHLPKSETPETSSSLDPNEACEDPILKIPSFKVSGAPSVSPTLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSPSPTSIQKMMANTIQRKINEQSSQDSLRNNGNTSGSECSSSGGGNSSASRKPSISVAKMIGGTDTSRFGASPNLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLDKLKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVPNGIKLPMFDAAPQLSFQPNMFWPQPNAGANYGLDFNRNPEFIKSHLAEVMRNSQLGVASNHHGHAGASGHMKSALEFAENMYDGIIRKTLKNDVNDVSGNSSSGNGNGNALLDQLLVKKTPLPFTNNRSNDYLGAACSTSESVKRAGSPMGVYSDIKRERLSPMRSAESGSSDDDLEHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNGRSRMTSRDSETDASSLKSEQSHSSLPANNKMMDLNGGNSVKFESVPLQQAAQISPSTSILHEKLAQIKAEQAEVHTANTEKQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01322564;
- 90% Identity
- -
- 80% Identity
- -