Scal003248.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- F54F2.9
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010000154.1:377037-378749[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.5 4.5e+03 -2.3 0.1 8 20 29 41 25 61 0.70 2 3 8.8e-08 7.2e-05 22.7 0.0 4 38 307 344 304 345 0.87 3 3 1.7e-08 1.4e-05 25.0 0.2 3 43 398 444 396 446 0.82
Sequence Information
- Coding Sequence
- ATGGAGCTGAATGCCAGGACAACACTGCCAGCAATACTGCTTGGCCTCCTGCTAATATGCGGGTCAGCAAGTGCATGGCACTCCGAGGAGCTAGAGATATTCGATCTCGTCGAGGAgatcaacaaaaacttttacgaATTCATGGGcatcaatcaaaatgccaCGAATAATGAAATAAAGCGTGCCTTTCGCACTCTCTCCATTGTGCTGCATCCAGACAAGAATCCCTCCGAAGACGCCAACATTCAGTTTCGCAATCTCGTCTCCATTTACGAGGTACTCAAGGATGCGTCCAAACGTGAAAAATACGATAAAGTCTTGCGCGATGGCATGCCCAACTGGAAATCTGCACTTTACTACTATCGTCGCATGCGTAAGATTGGCCTTTACGAAGGCGCCTTCATCCTTTTCTTAATTATCACTGTGGGCCAGTATCTGTTCGCCTGGGCCGCTTACCTAGAGAAGAAGTACACGGCTGAACAGGTTTTTGGCACTAAGCTgaaaaaacttcaaaaacgTAACAAAAATATCGACATGGATGTCATTCTGAGCGAGATCCCGATACCATCACTACTCAACACGCTGCCAATTCAAATACCAGTTGCCATATGGAATTTGCCCAAGACCATTAAGAATGGTTTCACCAAAGCCAATGAGCTAAAACAACTAGCATTGGAGAAGCGTAAACAAGAGATTGAGGCGGCGCGTCGCCAGGAAGAATTGGAGCGTGAGGCTGAGGAACAATCACGCTTGCGTAAGGAGCACAAAGAGAATCTGCGCAAACGAAAGCAGAACACCAAGGCGCCGGAAAAGACAGAGGAGGAGCTACGCGGCTACTCGCAAATACAAGCGCGTGAGCTAACCGAAGACGATGCAATACGTCCAGCTTCCCAAAAGAGTACCGTTAGTGGCGGTTTTTGGACAGACGAAGATCTGACCGAACTCATAAGATTGGTTAAAAAGTATCCTGGTGGTGCTGGCAGCCGCTGGAATACCATAGCCGAGTCCATGAATCGCACCGTCCAGGAGGTCACATTTATGGCGGCTAAGATGAAGGAGAACGGCTATCGTATACCCGGCCAAACGGACAGCGTTGCCGAAAACATAATCCAAGAGTCGCAGGATGCGGTACGCAAGGAGAAGGTTAAGAAAGTGTCGGCCAATGAGAAGAGCATGCTTATACCAGAGACTAACTGGACCCAGGAGCAGCAGCGCGCTTTGGAGGCGGCAATTGTGAAATATCGCAAAACCGCTGGCGGTGGCGATCGCTGGCAAAAGATTGCCAACAGTGTGCCCGAGAAGACAAAGGAGGAGTGCCTGGTGCGCTACAAATACTTGTGCGAACTAGTCAAGACACAAAAGAAGGCCGAGGAGGAAGAGGCAGACGCAGCCACAAATGATGAAGCTGCTCAACCCGAGGAAGAGGAGGACGAGCCACAGCCAGGGGagacaacagcgacagcagctgctgcccttacggctgctgcagctctgGCGCCAGCgaaaaaactaagcaaacgCGAACAGCGACGCCGCAAACGCGATCTGTCCAGCGACGAAGACTCCGACGATGCATATCAGTACGAGAACAGTTAG
- Protein Sequence
- MELNARTTLPAILLGLLLICGSASAWHSEELEIFDLVEEINKNFYEFMGINQNATNNEIKRAFRTLSIVLHPDKNPSEDANIQFRNLVSIYEVLKDASKREKYDKVLRDGMPNWKSALYYYRRMRKIGLYEGAFILFLIITVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKRNKNIDMDVILSEIPIPSLLNTLPIQIPVAIWNLPKTIKNGFTKANELKQLALEKRKQEIEAARRQEELEREAEEQSRLRKEHKENLRKRKQNTKAPEKTEEELRGYSQIQARELTEDDAIRPASQKSTVSGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRTVQEVTFMAAKMKENGYRIPGQTDSVAENIIQESQDAVRKEKVKKVSANEKSMLIPETNWTQEQQRALEAAIVKYRKTAGGGDRWQKIANSVPEKTKEECLVRYKYLCELVKTQKKAEEEEADAATNDEAAQPEEEEDEPQPGETTATAAAALTAAAALAPAKKLSKREQRRRKRDLSSDEDSDDAYQYENS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00616831;
- 90% Identity
- iTF_01325597; iTF_01321123; iTF_01327820; iTF_01327096; iTF_01322573; iTF_00513392; iTF_00497313; iTF_00498081; iTF_00521281; iTF_00576993; iTF_00593026; iTF_00616130; iTF_00542371; iTF_00511205; iTF_00518373; iTF_00552965; iTF_00501735; iTF_00564583; iTF_00527977; iTF_00535241; iTF_00597289; iTF_00552234; iTF_00582891; iTF_00500238; iTF_00496527; iTF_00498800; iTF_00482161; iTF_00557137; iTF_00606993; iTF_00576275; iTF_00609812; iTF_00570328; iTF_00619769; iTF_00543674; iTF_00573978; iTF_00560187; iTF_00495039; iTF_00558591; iTF_00485792; iTF_00566720; iTF_00522100; iTF_00548735; iTF_01326324; iTF_01321852; iTF_01324039; iTF_00598813; iTF_00514109; iTF_01324830; iTF_00525056; iTF_01323308;
- 80% Identity
- -