Scyr001712.1
Basic Information
- Insect
- Scaptomyza cyrtandrae
- Gene Symbol
- F54F2.9
- Assembly
- GCA_035044605.1
- Location
- JAWNNS010000166.1:164910-166649[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.3 7.2e+03 -2.7 0.2 6 19 28 40 25 47 0.62 2 3 5.5e-08 7.4e-05 22.9 0.0 4 38 307 344 304 345 0.87 3 3 1.5e-08 2.1e-05 24.6 0.2 3 43 398 444 396 446 0.83
Sequence Information
- Coding Sequence
- ATGGAGCTGTGTGTCAGGACAAATTTGTCAGCAATAGTGCTTGGCCTCCTGGTGATATGCGGCTCTGCAAGTGCATGGCACTCCGAGGAGCTCGAGATATTCGATCTCGTCGAGGAgatcaacaaaaacttttacgaGTTTTTGGGCATTAATCAAAATGCCACGAATAATGAAATAAAGCGTGCCTTTCGCACTCTTTCCATTGTGCTGCATCCGGACAAGAATCCGTCCGAAGACGCCAACATTCAGTTTCGCAATCTCGTCTCCATTTACGAGGTGTTAAAAGATACCTCCAAACGTGAAAAATACGATAAGGTCTTGCGCGAGGGCATGCCCAATTGGAAGTCGGCTCTCTACTACTACCGCCGCATGCGTAAGATTGGCTTATACGAGGGCGCCTTCATCTTATTCCTTATTATAACTGTCGGCCAGTATCTGTTCGCCTGGGCCGCTTACCTGGAGAAGAAGTACACGGCCGAACAGGTGTTTGGCACTAAGCTGAAAAAGCTTCAAAAGCGTAACAAAAATATCGACATGGATGTCATTCTGAGCGAGATCCCCATACCATCACTGCTCAACACGCTGCCAATTCAAATACCACTTGCCATATGGAATTTGCCCAagaccattaaaaatggttttacCAAAGCCAATGAGTTGAAGCAACAAGCATTGGAGAAGCGTAGACAAGAAATTGAGGCGGCGCGTCGCCAGGAAGAGTTGGAGCGTGAGGCTGAAGAACAGACACGCCTGCGTAAGGAGCACAAAGAGAATCTGCGGAAACGCAAGCAGAATACTAAGGCGCCGGAAAAGACGGAGGAGGAACTACGCGGTTACTCACAAATACAGGCGCGGGAGTTAACCGAAGAGGACGCAATTCGTCCAGCTTCCCAAAAGAGTACCGTAAGTGGCGGTTTTTGGACAGATGAGGATCTGACCGAACTGATAAGactagttaaaaaatatcctGGTGGTGCTGGTAGCCGTTGGAATACTATAGCCGAGTCCATGAATCGCACTGTCCATGAGGTAACATTCATGGCAGCAAAGATGAAGGAGAATGGTTATCGCATTCCAGGCCAAACGGACAGCGTTGCCGAAAACCTCATACAAGAGTCACAGGATGCAGTACGCAAGGAAAAGGTGAAAAAGGTCACGGCCAATGAAAAGAGCATGCTTATACCAGAGACTAACTGGACCCAAGAGCAGCAACGTGCTCTGGAGGCGGCGATTGTAAAATATCGAAAAACCGCCGGCGGTGCCGATCGTTGGCAAAAGATTGCCAACAGTGTGCCCGAAAAGACAAAGGAGGAGTGCCTAGTAcgctacaaatatttgtgcgAACTGGTCAAGACACAAAAGAAGGCCGAAGAAGAGGAGGCCGACGCAGCCACAATTGATAAAGCTGCACTACCTGAGGAGGATGAGGCGCCACAGCCAGAggagacaacagcaacagctgctgctgctactgctactgcagatactgctgttgctgccgctgccctGGCGCCAGCCAAAAAGCTTAGCAAACGCGAGCAGCGACGTCGCAAACGCGATCTGTCCAGCGACGAAGACTCTGATGATGCATATCAATACGAAATCAGTTAG
- Protein Sequence
- MELCVRTNLSAIVLGLLVICGSASAWHSEELEIFDLVEEINKNFYEFLGINQNATNNEIKRAFRTLSIVLHPDKNPSEDANIQFRNLVSIYEVLKDTSKREKYDKVLREGMPNWKSALYYYRRMRKIGLYEGAFILFLIITVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKRNKNIDMDVILSEIPIPSLLNTLPIQIPLAIWNLPKTIKNGFTKANELKQQALEKRRQEIEAARRQEELEREAEEQTRLRKEHKENLRKRKQNTKAPEKTEEELRGYSQIQARELTEEDAIRPASQKSTVSGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRTVHEVTFMAAKMKENGYRIPGQTDSVAENLIQESQDAVRKEKVKKVTANEKSMLIPETNWTQEQQRALEAAIVKYRKTAGGADRWQKIANSVPEKTKEECLVRYKYLCELVKTQKKAEEEEADAATIDKAALPEEDEAPQPEETTATAAAATATADTAVAAAALAPAKKLSKREQRRRKRDLSSDEDSDDAYQYEIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00616831;
- 90% Identity
- iTF_01320397;
- 80% Identity
- -