Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_035042405.1
Location
JAWNLI010000476.1:677554-679400[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.2 3.4e+03 -1.8 0.0 8 22 29 43 25 65 0.65
2 3 2.2e-07 0.00018 21.5 0.0 4 38 307 344 304 345 0.87
3 3 2.2e-08 1.8e-05 24.7 0.2 3 43 400 446 398 448 0.83

Sequence Information

Coding Sequence
ATGGATCTGTACGCGAGGACGTCACTGTCAGCAATACTGCTTGGCCTCCTGCTGATATGTGGCTCTGCAAGTGCGTGGCACTCCGAGGAGCTAGAGATTTTCGATCTTGTTGAGGAGgtcaacaaaaacttttacgAGTTTATGAGCATCAATCAGAATGCCACGAATAATGAAATAAAGCGCGCCTTTCGCACGCTCTCCATTGTGCTGCATCCAGATAAGAATCCGTCCGAGGATGCCAACATCCAGTTTCGCAATCTCGTCTCCATCTACGAGGTGCTCAAGGATGCCTCAAAACGCGAAAAATACGACAAAGTTTTGCGCGAAGGCATGCCAAATTGGAAGTCCGCTCTCTACTACTATCGCCGCATGCGTAAGATTGGCCTCTACGAGGGCGCCTTCATCCTGTTCCTTATCATCACTGTCGGCCAGTATCTGTTCGCGTGGGCCGCCTACCTGGAAAAGAAGTATACGGCTGAACAGGTGTTTggcacaaaactgaaaaagctacaaaagcgaaacaaaaacattgacATGGACGTTATTCTAAGCGAGATCCCGATTCCATCGCTGCTCAACACGCTGCCAATTCAAATACCACTTGCCATATGGAATCTGCCTAAGACCATCAAAAATGGATTCACCAAAGCCAATGAGCTAAAGCAACTCGCATTGGAGAAGCGCAGACAAGAAATTGAAGCGGTGCGTCGTCAGGAAGAACTGGAGCGCGAGGCTGAAGAGCAAACTCGTTTGCGTAAGGAGCACAAAGAGAATTTGCGAAAGCGCAAACAGAACACAAAGGCGCCGGAGAAAACAGAGGAGGAACTACGCGGATATTCGCAGATACAGGCAAGGGAGCTAACCGAAGACGACGCATTACGTCCAGCTACCCAAAAGAGTACTGTTAGCGGTGGCTTTTGGACAGATGAAGACCTGACCGAACTCATAAGACTAGTTAAAAAATATCCTGGTGGTGCTGGTAGCCGTTGGCATACCATAGCCGAGTCCATGAATCGCACCGTGCAAGAGGTGACTTTCATGGCGGCGAAGATGAAGGAGAACGGCTATCGCATACCCGGCCACACAGACAGCGTTGCTGAGAACCTTGACCAGGACTCCCAAGACGCCGTGCGCAAGGAGAAGGTGAAAAAAAATTCGACCATGGCTAATGAAAAGAGCATGCTTATACCAGAGACCAACTGGACTCAGGAGCAACAGCGCGCTCTGGAGGCggcaattgtaaaatatagaaaaactgCCGGAGGCGCGGATCGTTGGCAAAAGATTGCCAACAGTGTGCCTGAAAAGACTAAGGAGGAGTGTCTGGTGCGCTACAAATACTTGTGCGAACTGGTCAAGACACAGAAGAAGGCTGAGGAGCAAGAGGCAGACCCAGCCAGCATTGATGGCGCTGCTCTCCCAGAGGATGAGGCGCCAGAGCCAGAAAAAGCAACATtgacaactgctgctgttgctgctgacctGGTGCCATCTAAAAAGCTGAGCAAACGTGAGCAGCGTCGACGCAAACGCGATCTATCCAGTGACGATGACTCCGATGATGCATATCAATACGAAATTAGTTAG
Protein Sequence
MDLYARTSLSAILLGLLLICGSASAWHSEELEIFDLVEEVNKNFYEFMSINQNATNNEIKRAFRTLSIVLHPDKNPSEDANIQFRNLVSIYEVLKDASKREKYDKVLREGMPNWKSALYYYRRMRKIGLYEGAFILFLIITVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKRNKNIDMDVILSEIPIPSLLNTLPIQIPLAIWNLPKTIKNGFTKANELKQLALEKRRQEIEAVRRQEELEREAEEQTRLRKEHKENLRKRKQNTKAPEKTEEELRGYSQIQARELTEDDALRPATQKSTVSGGFWTDEDLTELIRLVKKYPGGAGSRWHTIAESMNRTVQEVTFMAAKMKENGYRIPGHTDSVAENLDQDSQDAVRKEKVKKNSTMANEKSMLIPETNWTQEQQRALEAAIVKYRKTAGGADRWQKIANSVPEKTKEECLVRYKYLCELVKTQKKAEEQEADPASIDGAALPEDEAPEPEKATLTTAAVAADLVPSKKLSKREQRRRKRDLSSDDDSDDAYQYEIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00616831;
90% Identity
iTF_01320397;
80% Identity
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