Sred008126.1
Basic Information
- Insect
- Scaptomyza reducta
- Gene Symbol
- F54F2.9_1
- Assembly
- GCA_035044485.1
- Location
- JAWNNV010000802.1:94278-95997[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5 4.8e+03 -2.3 0.1 8 20 29 41 25 61 0.70 2 3 1.6e-07 0.00016 21.7 0.0 4 38 307 344 304 345 0.86 3 3 1.9e-08 1.9e-05 24.6 0.2 3 43 398 444 396 446 0.83
Sequence Information
- Coding Sequence
- ATGGAGCTGAATGTCAGGACAACTCTGCCAGCAATACTGCTTGGCCTCCTGCTGATATGCGGCTCAGCAAGTGCATGGCACTCCGAGGAGCTAGAGATATTCGATCTCGTCGAGGAgatcaacaaaaacttttacgaGTTTTTGGGCATCAATCAAAATGCCACGAATAATGAAATAAAGCGTGCCTTTCGTACTCTCTCCATTGTGCTGCATCCGGACAAGAATCCGTCCGAAGACGCTAACATTCAGTTTCGCAATCTCGTCTCCATTTACGAGGTGCTCAAGGATGCCTCCAAACGTGAAAAATACGATAAGGTCTTGCGCGAGGGCATGCCCAATTGGAAGTCGGCTCTCTATTACTACCGCCGCATGCGTAAGATTGGCCTATACGAGGGCGCCTTCATCCTATTCCTTATTATAACTGTCGGCCAGTATCTGTTCGCCTGGGCCGCTTACCTGGAAAAGAAGTATACGGCCGAACAGGTGTTTGGCACTAAGCTAAAAAAGCTTCAAAAGCGTAACAAAAATATCGACATGGATGTCATTCTGAGCGAGATCCCCATGCCATCACTGCTCAACACGCTGCCAATTCAAATACCATGTGCCATATGGAATTTGCCCAAAACCGTTAAAAATGGCTTTACCAAAGCCAATGAGTTGAAACAACTAGCCTTGGAGAAGCGTAGACAAGAAATTGAGGCGGTGCGTCGCCAGGAAGAATTGGAGCGTGAGGCGGAGGAACAGACACGTCTGCGTAAAGAGCACAAAGAGAATTTGCGCAAACGCAAGCAGAACACCAAGGCGCCGGAAAAGACAGAGGAAGAACTTCGTGGTTACTCGCAAATACAGGCGCGGGAGTTAACCGAAGACGATGCAATTCGTCCAGCTTCCCAAAAGAGTACCGTTAGTGGCGGTTTTTGGACAGATGAGGATCTGACCGAATTGATAAGACTAGTTAAAAAATATCCTGGTGGTGCTGGTAGCCGCTGGAATACTATAGCAGAGTCCATGAATCGCTCTGTCCATGAGGTAACATTTATGGCCGCTAAGATGAAGGAGAACGGCTATCGCATTCCAGGCCAAACGGACAGCGTTGCCGAAAACCTCATACAAGAATCACAGGATGCGGTGCGCAAAGAGAAGGTGAAAAAAGTCACGGCTAATGAGAAGAGCATGCTTATACCAGAGACTAACTGGACCCAAGAGCAGCAGCGCGCTCTAGAGGCGGCGATTGTAAAATATCGAAAAACCGCCGGCGGTGCCGATCGTTGGCAAAAGATTGCCAACAGTGTACCCGAAAAGACAAAGGAGGAGTGCCTGGTGCGCTACAAATACTTGTGCGAACTAGTCAAGACCCAAAAGAAGGCCGAAGAGGAGGAGGCCGACGCTGTCACAATTGATAAAGCTGCTCTCCCTGAGGAGGATGAGGCGCCACAGCCAGAGGAGACAACAGGaccaacagctgctgctgcggtttcTGCTGCCACTGACCTGGCGCCAGCCAAAAAGCTTAGCAAACGCGAGCAGCGACGTCGCAAACGCGATCTGTCCAGCGACGAAGACTCTGACGATGCACATCAGTACGAAATCAGTTAG
- Protein Sequence
- MELNVRTTLPAILLGLLLICGSASAWHSEELEIFDLVEEINKNFYEFLGINQNATNNEIKRAFRTLSIVLHPDKNPSEDANIQFRNLVSIYEVLKDASKREKYDKVLREGMPNWKSALYYYRRMRKIGLYEGAFILFLIITVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKRNKNIDMDVILSEIPMPSLLNTLPIQIPCAIWNLPKTVKNGFTKANELKQLALEKRRQEIEAVRRQEELEREAEEQTRLRKEHKENLRKRKQNTKAPEKTEEELRGYSQIQARELTEDDAIRPASQKSTVSGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRSVHEVTFMAAKMKENGYRIPGQTDSVAENLIQESQDAVRKEKVKKVTANEKSMLIPETNWTQEQQRALEAAIVKYRKTAGGADRWQKIANSVPEKTKEECLVRYKYLCELVKTQKKAEEEEADAVTIDKAALPEEDEAPQPEETTGPTAAAAVSAATDLAPAKKLSKREQRRRKRDLSSDEDSDDAHQYEIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00616831;
- 90% Identity
- iTF_01320397;
- 80% Identity
- -