Scal003638.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- Arid4b
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010000164.1:587070-589304[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-29 1.8e-25 89.0 0.1 1 88 300 384 300 385 0.95
Sequence Information
- Coding Sequence
- ATGCAGCAAGCCGATGATCCACCATCGCTGCCCGTGGGTACCGAGGTGAGCGCCAAATACAAGGGCGCATTCTGCGAGGCCAAAGTCAGTAAAGTGGTGCGCAATATTAAGGTAAAGGTTGCCTACAAGCAGGGTCTTGGTTCGGGGATTGTGCCGGACGATGCTGTAAAGGCGGCACCTGGCCAATTGCGTGCCGGCGCTGTCGTTGAAGTGCGTCATCCAGATCGCAAGGAATGTGTTGAGGCGACCATAACCAAAATTCAGGATTGCTCTCAATACACGGTCGTCTTCGATGATGGCGACATCACAACGTTGCGTCGCACAGCGCTCTGCTTAAAGAGTGGTCGCCATTTCAATGAGAGCGAAACATTAGATCAGTTGCCACTAACACATCCGGAGCATTTCGGTAATCCAGTGGTGGGTGGTCGACGTGGACGTCGTCGTGGTCAGCTTAATGATGGCAGctctgatgatgatgatgagagtGATGCCAAGGAGGTGGTCAATGAGAAAGAGGAGCATATTGGCAAAGTTGTTTGCGTGGAGACCGAATCCAAGAAGAAGGACAAGGAGAAATGGTTTCCAGCTCTTGTCGTCGCACCCACCGCCCAGGTCAGCAAGCAGgcCACTGTGCGTATACGTGTTAAGGATGAGTATTTAGTGCGTTCGTTTAAGGACGGACGCTACTATACGGTGCCCAAGAAGGAGGCAAATGAGTTTACACGCGAAATAGCCAGCAAACAGGATGTGCCCGCTGTGCAGGCAGCTCTCGAGTTTCTTGACAAGAGCGTATTGCCAGCCCATTGGGATCGCGACTCTCTATTCGGCTTGTCCAACTTGACAAGCGATGATGAGGCTGAAATTGAGTCGGATTCGTCGGACGATGAGCCGCACGAGGAAAAGGATCTGTTTGTGGCCCAATTGTACAAGTATATGGATGATCGTGGCACACCATTGAACAAGGTACCATCGATCCAAAGTCGCGATGTCGATCTCTATCGCCTCTTTCGGGCAGTGCAGAAACGTGGCGGCTACAATCGTGTTACCGCCAAAAATCAATGGAAACTGATCGCCATGCGGCTTGGATTCACGCCCACCTTCAGTGTTATGAATCTGGTCAAGCAGGCATATAAGAAATTCTTGCAACCCTATGGTGACTTTCATCGCAAGCTTGGCTGCTCCATGCTAATGACGTCGCGCAATTCCAATCGCAGCAAGGGTCGCAGTCTGGTGCGTGCCAATTCGGTGGCTTCGCCCAAACCGGCTGACGTTAAAACGGAGATAATAAGCaagatggcaatggcaaatcAAGCACTTGCTGCCgccgcaagcagcagcacttcaacaacaacagcgaccaTAAcgtcagcaacagctgctgcagcagctacaacaacggcagcagcagctgcatcttcagcaacaacaacagttgcagcaactgcaacaagcaCGACAACTTCACGTGCTGCCTCCAGGGCAATCTCTCAATCGGCCGCCGAGGAATCGGGCAACACTAGCGAATCCAGTGTGGTTGTGGAGCCAGTCAAGAAACAGCGCAAAGCATCTGCTGCCAGCGCTGGCAAAGTCAAGAGTCTTGTGGAAAAATACGAGGAGAAATCAACCGTGTCATccacaactacagcaacagctgctgcaacggcagcagcagcagcaaccgccacagcagcagccgctgttCCACCAGCAGCTAGCACAGCAGCTtccacatcagcagcagcatcaacatcagcagcagccgctgcagctgcagcagcagctagcgCTAAGGATACCAAGGATGCGGAAGCGGATGTGCCATTGTCAAAGAtcaaggctgctgctgcaacaacgcGCAACAATAGCATGGACAAGGAGCCAAGTGTTGCCGGCAGCAATGCATCAAGCAAAGCCGCTTCAGAAACTCAACGCAGTCGCGATGCatcgccagcaacagcaacggTTGTCTTTGTGtag
- Protein Sequence
- MQQADDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVPDDAVKAAPGQLRAGAVVEVRHPDRKECVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQLNDGSSDDDDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPALVVAPTAQVSKQATVRIRVKDEYLVRSFKDGRYYTVPKKEANEFTREIASKQDVPAVQAALEFLDKSVLPAHWDRDSLFGLSNLTSDDEAEIESDSSDDEPHEEKDLFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTAKNQWKLIAMRLGFTPTFSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSKGRSLVRANSVASPKPADVKTEIISKMAMANQALAAAASSSTSTTTATITSATAAAAATTTAAAAASSATTTVAATATSTTTSRAASRAISQSAAEESGNTSESSVVVEPVKKQRKASAASAGKVKSLVEKYEEKSTVSSTTTATAAATAAAAATATAAAAVPPAASTAASTSAAASTSAAAAAAAAAASAKDTKDAEADVPLSKIKAAAATTRNNSMDKEPSVAGSNASSKAASETQRSRDASPATATVVFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01327670; iTF_01326944; iTF_01325442; iTF_01324680; iTF_01322421; iTF_01323160; iTF_01326172;
- 90% Identity
- iTF_01326172;
- 80% Identity
- -