Spol016879.2
Basic Information
- Insect
- Scaptomyza polygonia
- Gene Symbol
- Arid4b
- Assembly
- GCA_035044585.1
- Location
- JAWNNU010001668.1:1807080-1812481[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-28 8.7e-25 87.5 0.1 1 88 368 452 368 453 0.95
Sequence Information
- Coding Sequence
- ATGATGCCTCTTTTCACGCCCAAAACCATTCCATCGATTCAATCCGAGCTGCAAAAGGAATGCGAAAGAAAagtcaacaacaatagcaacaacaacaacaacaacttgcaaTTGGAAAGCATTTCGAATTGGCACATTGTTTCGACGCCTTGGACAGGGCCCTCGACCAAAGGACCAAGAAACCAAGGATCCAAGCATCCGTGCCAGAAGCAAGCCGATGATCCACCATCGCTGCCCGTGGGCACCGAGGTGAGCGCCAAATACAAGGGCGCTTTCTGCGAGGCCAAAGTCAGCAAAGTGGTGCGCAATATCAAGGTAAAGATAATATACAAGCAGGGTCTTGGTTCTGGTATTGTCCCGGACGATGCCGTAAAAGCGGCGCCTGGACAGTTACGCGCCGGTGCGGTCGTTGAAGTGCGTCATCCAGATCGCAAGGAATATGTTGAGGCGACCATAACAAAGATTCAGGATTGCTCTCAATACACGGTCGTCTTCGATGATGGCGACATCACAACGCTGCGTCGCACAGCGCTCTGTTTGAAAAGTGGCCGCCATTTCAATGAGAGCGAAACATTGGATCAACTGCCATTAACACATCCGGAGCATTTCGGTAATCCCGTTGTGGGTGGTCGACGTGGACGTCGTCGTGGTCAGCTCAATGATGGCAGCtccgatgatgatgacgagaGCGATGCCAAGGAGGTGGTCAATGAGAAGGAGGAGCATATTGGCAAAGTTGTTTGCGTTGAGACCGAATCGAAGAAAAAGGACAAAGAGAAATGGTTTCCAGCTCTTGTTGTTGCACCCACCGCACAAGTGAGCAAGCAGGCAACTGTGCGCATCCGCGTTAAGGACGAGTATCTGGTGCGTTCGTTTAAGGATGGACGCTATTATACGGTGCCCAAGAAGGAGGCAAATGAGTTTACGCGCGAAATAGCCAGCCGACAGGATTCGCCCGCTGTGCAGGCAGCTCTGGAATTTCTGGACAAGAGCATATTGCCCGCTCACTGGGATCGCGACTCGCTATTCGGCTTGTCCAACATGACCAGCGACGAGGAGGTAGAAATTGAAACGGATTCATCGGACGATGAGCCGCACGAGGAGAAGGATCTGTTTGTGGCACAATTGTACAAGTATATGGATGATCGTGGCACACCGTTGAACAAGGTGCCATCGATCCAGAGTCGCGATGTCGATCTCTATCGCCTGTTTCGTGCCGTGCAAAAACGCGGCGGCTACAATCGTGTTACCGCCAAAAATCAATGGAAACTTATCGCACTGCGTCTGGGTTTCACGCCCACCTTCAGTGTCATGAATCTGGTGAAGCAGGCATATAAGAAATTCTTGCAACCCTATGGCGATTTCCATCGCAAGCTCGGCTGCTCCATGCTAATGACGTCGCGCAACTCAAATCGCAGCAAAGGTCGTAGCCTGGTGCGCGCCAATTCGGTGGCTTCGCCCAAACCGGCGGACGTCAAAGCCGAGATAATCCACAAAATATCTATAGCCAATCAGGCACTTGccgcagcaagcagcagcagcagcacttcAACAACCACAGCAACTATAACATCAGCAACTGCATCGGCAGCAActacatcaacagcagcagcagccgctgcatcagcaacagcaacaacaactacagttGCTGCTACATCAACTAGCAGCATTATTTCGCGTTCTGCATCCAGGGCCATTTCACAATCGGCTGCTGAGGAATCGGGCAATACAAGCGAATCCAGTGTGGTTGTGGAGCCAGTTAAGAAGCAGCGCAAAGCATCGGCTGCCAGCACTGGCAAAGTCAAGGGTCTTGTCGAAAAATATGAAGAGAAATCAACCGTGTCATCtacaagcacaacaacaacaactgttgcaacggcagcagcagcacctgttgcaacagcaaccaGCACAGCAGCTGCCACATCAACAGCAGTAGCATCAACAGCCGCAGCATctaaagcagcagcatcaaaagcagcagcagccgcggcagcagcagcagcagcagctagccTTAAGGATAACAAGGATAGCAAGGATGCCGAAGCGGATGTGCCATTGTCAAAGATCAaagctgctgcagcaacaacgcgcaacagcagcatggAAAAGGAACCAAGTGTCACCGGCAGCAATGCATCAAGCAAAGCCGCTTCTGAAACTCAACGCAGCCGCGATGCATCgccagcagctgcagcaacaacagcaacgggTAAGTGTGATTATTTGAATCTATTCTAA
- Protein Sequence
- MMPLFTPKTIPSIQSELQKECERKVNNNSNNNNNNLQLESISNWHIVSTPWTGPSTKGPRNQGSKHPCQKQADDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKIIYKQGLGSGIVPDDAVKAAPGQLRAGAVVEVRHPDRKEYVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQLNDGSSDDDDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPALVVAPTAQVSKQATVRIRVKDEYLVRSFKDGRYYTVPKKEANEFTREIASRQDSPAVQAALEFLDKSILPAHWDRDSLFGLSNMTSDEEVEIETDSSDDEPHEEKDLFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTAKNQWKLIALRLGFTPTFSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSKGRSLVRANSVASPKPADVKAEIIHKISIANQALAAASSSSSTSTTTATITSATASAATTSTAAAAAASATATTTTVAATSTSSIISRSASRAISQSAAEESGNTSESSVVVEPVKKQRKASAASTGKVKGLVEKYEEKSTVSSTSTTTTTVATAAAAPVATATSTAAATSTAVASTAAASKAAASKAAAAAAAAAAAASLKDNKDSKDAEADVPLSKIKAAAATTRNSSMEKEPSVTGSNASSKAASETQRSRDASPAAAATTATGKCDYLNLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01320250;
- 90% Identity
- iTF_01320250;
- 80% Identity
- -