Spal008158.1
Basic Information
- Insect
- Scaptomyza pallida
- Gene Symbol
- Arid4b
- Assembly
- GCA_018152965.1
- Location
- JAECXP010000003.1:6364825-6367526[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-29 1.5e-25 89.5 0.1 1 88 300 384 300 385 0.95
Sequence Information
- Coding Sequence
- ATGCAGCAAGCAGACGATCCACCATCGCTGCCCGTCGGCACCGAGGTGAGCGCCAAATATAAAGGCGCCTTTTGTGAAGCCAAAGTCAGTAAAGTGGTGCGCAACATCAAGGTAAAGGTTGCCTATAAGCAGGGTCTTGGCTCTGGCATTGTCTCCGACGATGCCATCAAAGCGGCGCCTGGACAATTGCGTGCCGGCGCTGTCGTCGAAGTGCGTCATCCCGATCGCAAGGATTGCGTTGAGGCAACCATAACCAAAATACAGGATTGCTCCCAGTACACAGTTGTCTTTGATGATGGCGATATCACCACGTTGCGGAGAACTGCTCTGTGCTTAAAAAGTGGACGGCATTTCAATGAGAGCGAAACATTAGATCAGTTGCCATTGACGCATCCGGAACACTTTGGTAATCCCGTGGTGGGTGGACGACGCGGACGTCGACGTGGTCAGCTCAATGATGGCAGCTCCGATGATGATGACGAGAGCGATGCCAAGGAGGTGGTCAACGAAAAGGAGGAGCACATAGGCAAAGTTGTGTGCGTCGAAACTGAATCCAAGAAAAAGGACAAAGAGAAATGGTTTCCAGCGCTCGTTGTGGCACCCACCGCCCAGGTTAGCAAGCAGGCCACTGTACGTATACGTGTTAAGGATGAGTATCTGGTGCGTTCGTTCAAGGATGGAAGGTATTATACGGTGCCCAAGAAGGAGGCGAATGAGTTTACACGCGAAATAGCCAGCAAACAGGATGTGCCCGCTGTCCAGGCAGCTCTCGAATTCCTGGACAAGAGCATATTGCCAGCACACTGGGATCGCGACTCTCTGTTCGGGTTGTCCAACTTGACCAGCGATGATGAGGCCGAAATCGAATCGGATTCCTCCGACGATGAGCCGCACGAGGAGAAGGATCTGTTTGTGGCCCAGCTATACAAGTATATGGATGATCGTGGCACACCTTTGAACAAAGTGCCCTCAATCCAAAGTCGCGATGTCGATCTCTATCGTCTGTTCCGAGCGGTGCAAAAACGTGGCGGCTACAATCGTGTCACGGCCAAGAATCAATGGAAATTAATTGCCATGCGGCTGGGTTTTACGCCCACGTTTAGCGTCATGAATCTGGTGAAGCAGGCCTATAAGAAATTCTTGCAACCTTACGGGGACTTCCATCGCAAGCTCGGCTGCTCCATGCTGATGACGTCGCGCAACTCCAATCGCAGCAAGGGACGCAGCTTGGTGCGCGCCAACTCAGTGGCGTCGCCCAAGCCGGCGGATGTCAAAACCGAGATTATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGCCGCCTCGAGGGCAATCTCTCAATCGGCTGCCGAGGAATCGGGCAACACTAGCGAATCCAGTGTCGTTGTGGAGCCCGTGAAGAAGCAGCGTAAAGCTTCCGCGGCCAGCACTGGCAAAGTCAAGATGAAAAATAGTCACAATTGGTTGTAA
- Protein Sequence
- MQQADDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDAIKAAPGQLRAGAVVEVRHPDRKDCVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQLNDGSSDDDDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPALVVAPTAQVSKQATVRIRVKDEYLVRSFKDGRYYTVPKKEANEFTREIASKQDVPAVQAALEFLDKSILPAHWDRDSLFGLSNLTSDDEAEIESDSSDDEPHEEKDLFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTAKNQWKLIAMRLGFTPTFSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSKGRSLVRANSVASPKPADVKTEIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAASRAISQSAAEESGNTSESSVVVEPVKKQRKASAASTGKVKMKNSHNWL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01320250;
- 90% Identity
- iTF_01322421;
- 80% Identity
- -