Stum001026.1
Basic Information
- Insect
- Scaptomyza tumidula
- Gene Symbol
- Arid4b
- Assembly
- GCA_035044465.1
- Location
- JAWNNW010000130.1:2719632-2721704[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-28 5.5e-25 87.5 0.1 1 88 307 391 307 392 0.95
Sequence Information
- Coding Sequence
- ATGAACGTGAATATTTcgaaaatagcaaaaatgcAGCAAGTGGACGATCCACCACTGCTGCCCGTGGGCACGGAGGTTAGCGCCAAATATAAAGGCGCCTTCTGCGAGGCCCGGGTCAGTAAGGTGGTTCGGAACATAAAGGTAAAGATTCTGTACAAGCAGGGTCTGGGCATTGGCATTGTGCCCGACGATGCTATTAAGGGACAGATGCGTAATGGCGCGACCGTTGAAGTTCGCCATCCAGATCGCAAGGAATGCGTCGAGGCGACCATTACCAAAATCCAGGATTTATCCCAATACACGGTCGTCTTTGATGATGGCGACATCACAACGTTGCGGCGCACAGCGTTATGTTTAAAGAGTGGACGTCATTTCAATGAGAGCGAAACATTGGATCAGTTGCCACTAACGCATCCGGAACACTTTGGTAATCCGGTTGTGGGTGGTCGACGTGGACGTCGTCGTGGTCATCTAAATGATGGCAGcaccgatgatgatgacgagaGCGATGCCAAGGAGGTGGTGAACGAGAAAGAGGAGCATATTGGCAAAGTTGTTTGCGTCGACACCGAATCCAAGAAAAAGGACAAAGAGAAATGGTTTCCAGCTCTCGTTGTTGCGCCCACCGCCCAGGCTAGCAAGCAGGCAACCGTGAAAATATGCATTAAGAACGAGTATCTGGTGCGTTCGTTCAAGGATGGACGATATTATACCGTGCCCAAAAAGGAGGCGAATGAGTTTACGCGCGAAATAGCCAGCCAACAGGATGTGCCCGCTGTGCATGCAGCTTTAGAGTTTCTCGACCAGAGCATACTGCCTGCCCACTGGGATCGTGACTCTCTATTCGGCTTGTCCAACATGACAACCGATGATGAGGTAGACGTTGAAACCGATTCCTCCGACGATGAGCCGCACGAGGAGAAGGATTTGTTTGTGGCACAGCTATACAAGTATATGGATGATCGTGGCACACCATTGAACAAGGTGCCATCGATCCAAAGTCGCGATGTCGATCTCTATCGTCTATTCCGTGCGGTACAGAAACGTGGCGGCTACAATCGTGTGACGGCCAAAAATCAATGGAAAGTCATAACAATGCGTTTGGGTTTCACGCCCACTTTTAGTGTTATGAATCTGGTGAAGCAGGCATATAAGAAGTTCTTGCAACCGTATGGTGACTTCCATCGCAAGCTTGGCTGCTCCATGCTGATGACGTCGCGCAATTCGAATCGCAGCAAAGGTCGCAGCTTGGTGCGCGCCAATTCGGTGGCATCGCCCAAACCCGCTGACGTTAGATCCGAGATTATAAGCAAGATAACAATGGCAAATCAGGCACTTGCCGCAAGCAATTCCACATCAGCTGCAGCAAGTacatctgcagcagcagcagctgcaacagcaacaacaagtactGCTACTACAACGCGTGCTGCCTCGCGAGCAATTTCTCAGTCGGCTGCTGAAGAATCGGGCAACACTAGCGAATCGAGTGTGGCTGTGGAGCCGGTCAAGAAGCAGCGCAAAACATCTGCGGCCAGCACTGGCAAAGTCAAGCATCTTGTGGAGAAATATGAAGAGAAATCAACAGtgtcatcaacaacaactacaacaacagcaacaactgttgccgcagcaacagcagcagcagctgctgtacCAATAGCAGCTACCacatcggcagcagcagctgcagctagCGCTAAGGACATCAAGGATGCCGATGCGGATGTGCCATTGTCAAAGATcaaggctgctgctgcagcaacaacgcgCAACAACAGCTTGGACAAGGAACCAAGTGTCACCGGCAGCAATGCCTCAAGCAAAGCTGCCTCCGAAACTCAACGCAGTCGCGATGCATCGCCAACAGCAACGGGTAAGTGTGCCTTTCAGTTTACCCCTTGA
- Protein Sequence
- MNVNISKIAKMQQVDDPPLLPVGTEVSAKYKGAFCEARVSKVVRNIKVKILYKQGLGIGIVPDDAIKGQMRNGATVEVRHPDRKECVEATITKIQDLSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGHLNDGSTDDDDESDAKEVVNEKEEHIGKVVCVDTESKKKDKEKWFPALVVAPTAQASKQATVKICIKNEYLVRSFKDGRYYTVPKKEANEFTREIASQQDVPAVHAALEFLDQSILPAHWDRDSLFGLSNMTTDDEVDVETDSSDDEPHEEKDLFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTAKNQWKVITMRLGFTPTFSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSKGRSLVRANSVASPKPADVRSEIISKITMANQALAASNSTSAAASTSAAAAAATATTSTATTTRAASRAISQSAAEESGNTSESSVAVEPVKKQRKTSAASTGKVKHLVEKYEEKSTVSSTTTTTTATTVAAATAAAAAVPIAATTSAAAAAASAKDIKDADADVPLSKIKAAAAATTRNNSLDKEPSVTGSNASSKAASETQRSRDASPTATGKCAFQFTP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01320250;
- 90% Identity
- iTF_01326944;
- 80% Identity
- -