Basic Information

Insect: Sarcophaga peregrina
Gene Symbol: L
Assembly: GCA_014635995.1
Location: CM025793.1:71666596-71682519[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8.1e-06 0.00065 20.6 1.7 1 23 247 269 247 269 0.98

2 18 0.68 54 5.2 5.8 1 23 275 297 275 297 0.98

3 18 3.5e-07 2.8e-05 24.9 3.1 1 23 303 325 303 325 0.99

4 18 1.6e-05 0.0013 19.7 0.3 1 23 331 353 331 353 0.98

5 18 0.034 2.7 9.3 2.5 2 23 468 490 467 490 0.96

6 18 0.043 3.4 8.9 0.7 1 23 591 613 591 613 0.97

7 18 0.77 61 5.0 1.3 2 23 621 642 620 642 0.93

8 18 0.00088 0.07 14.3 0.3 1 23 650 674 650 674 0.92

9 18 8.8 7e+02 1.7 0.1 1 19 679 697 679 699 0.91

10 18 3.6 2.9e+02 2.9 0.7 1 23 709 732 709 732 0.91

11 18 0.0021 0.17 13.0 2.9 1 23 771 793 771 794 0.96

12 18 4.6 3.7e+02 2.5 0.9 1 23 977 1001 977 1001 0.89

13 18 0.0012 0.098 13.8 4.8 2 23 1010 1032 1009 1032 0.97

14 18 0.18 14 7.0 0.1 1 23 1038 1060 1038 1060 0.92

15 18 0.24 19 6.6 0.6 2 23 1068 1089 1068 1089 0.95

16 18 0.41 32 5.9 0.5 2 23 1179 1200 1179 1200 0.94

17 18 0.0026 0.2 12.8 0.0 1 23 1210 1232 1210 1232 0.97

18 18 0.032 2.6 9.3 0.7 1 23 1239 1261 1239 1261 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8.1e-06	0.00065	20.6	1.7	1	23	247	269	247	269	0.98
2	18	0.68	54	5.2	5.8	1	23	275	297	275	297	0.98
3	18	3.5e-07	2.8e-05	24.9	3.1	1	23	303	325	303	325	0.99
4	18	1.6e-05	0.0013	19.7	0.3	1	23	331	353	331	353	0.98
5	18	0.034	2.7	9.3	2.5	2	23	468	490	467	490	0.96
6	18	0.043	3.4	8.9	0.7	1	23	591	613	591	613	0.97
7	18	0.77	61	5.0	1.3	2	23	621	642	620	642	0.93
8	18	0.00088	0.07	14.3	0.3	1	23	650	674	650	674	0.92
9	18	8.8	7e+02	1.7	0.1	1	19	679	697	679	699	0.91
10	18	3.6	2.9e+02	2.9	0.7	1	23	709	732	709	732	0.91
11	18	0.0021	0.17	13.0	2.9	1	23	771	793	771	794	0.96
12	18	4.6	3.7e+02	2.5	0.9	1	23	977	1001	977	1001	0.89
13	18	0.0012	0.098	13.8	4.8	2	23	1010	1032	1009	1032	0.97
14	18	0.18	14	7.0	0.1	1	23	1038	1060	1038	1060	0.92
15	18	0.24	19	6.6	0.6	2	23	1068	1089	1068	1089	0.95
16	18	0.41	32	5.9	0.5	2	23	1179	1200	1179	1200	0.94
17	18	0.0026	0.2	12.8	0.0	1	23	1210	1232	1210	1232	0.97
18	18	0.032	2.6	9.3	0.7	1	23	1239	1261	1239	1261	0.93

Sequence Information

Coding Sequence: ATGTATTCGACTCATACATCTTCCAGTTATTCACCTTCCATATCAGATGGTACCATCACACCAAATTCTTTACATCATCATACCCAacacaatcaacaacaacaacatcatcatcaacatcaacatcatcatcagcatcaccaGCATTTGGCGTCTGTGCCACCGCATTTACCATTTCCCAATATGTCTGCTTATGAAGaagagacaacaacaacatcgtcaTCGATGAATCTACAGACACAACGTCTGGCAAGACAAAAAACTAATGGGTCGGTCATGGATGGCGCTGACTATGAAGACAACAATAATGGCAACGACAATGAGAAAGCCAGCAGTAGTGACATCAACAACGACCGCAAAGACCTTAACAGCGAAAGGATACACAAAAATGATACAAAATTAAACGATGATGGTGAAGAAACGGATGTTGCAACCAAAAAGACAGCAGACACAATTATGCGCGAAAGTGGTGagcaacatcagcaacagcagcaacaacaacatcatcttaAACGTCATGGTCGTCATCATCGTTATGCTGAACATGCCTTAAGAATTCCTTCCAAATTACGTAAAATCGATAGGGATTCAACGGTTGGCAATGGTGCCAGCACCGTCGGTGTTCCTTCAACGGCTGGTAGTGCTGGTGGTGGCAGTGGTGGTGCAGTCAAGTTTGATAAGTTGACAGGAGATGGCATTAAAAGTGGTGGCAACAATGCTGCCAGTGCCGACGGTTCCTATCAATGTCAATTCTGTGATAAATCATTTCCGCGTCTTGGTTATTTGAAAAAACATGAACAGAGTCACGCTGAGCATTTGCCTTTTAAATGTGATTATTGTGCTCGTCTTTTTAAGCACAAACGCTCTAGGGATCGTCATACCAAACTGCATACAGGCGATCGACGTTATCGTTGTCCCCATTGCGAGGCAGCCTTCTCAAGGAGTGATCATTTGAAAATCCATATGAAAACCCATGATAACCAGAAACCGTTTCAATGCACCATTTGTAATCGCGGCTATAATACGGCTGCTGCTCTTACATCGCACATGCAAAATCATAAGAAACAGGCTGCTCTTTTGGCAGCTGGTGGCAATCCGCAAGCTCTTAATTACAGCCCACGATCTACAGGATCTGCCTCTAGCAATGGCAGTCTACAGAAGCGGCGTTATGGTTTAGCAGCGGCTGCCGAACAAAGTCCCAGCAGGATAGATTATCCTAAACGTGGACGTTCGGCATCATCGAATATGCTAAAGTGCACATTCTGTTCAAAATCTGACTTTACCGCCGTAGAACAGTTAAACAATCACTTGCATACACAGCATGAAAAAGAATTGGCTCATTCCATGACACCGCCCGCAGCAAACAGCCATCCACCGCTCGATAACCATAGTTTCCAGTTATCGTGTGAATACTGCACCATGAAATTCCACAATATTGCCACCATGTTTCAACATATGCGTTCATCGCATTTAGATCGTTTAACCAGTCCAAATTCGTACTTCGAACATTTTAATCGCTTAGCTGCCTCTGGTACTTTCAGTCCACGTTTGTTAACAGCTCATCCCCTCCGGAGTTCAGCCAGTACCGAAGAGAATTCCATCAAAGAAGAACACAATTTATCAAGTCCTAAATCTGTAGAAGCCAGTTCACGCCATAACGATGATGAGCCTACAGATCTGAGTCAAAATAATCGCAGATCCATAACGCCCACCAATTCACCGCAGAATTCTCCACAGGAAATGTTGAGTACCACCGAAAAGCCAGGCTTATTCTTTTGCAATCAATGCAATGCTGGTCTACCAGACTTTGAATCATTTCGTAATCACTTAAAGACGCATATAGCCCAAGGTCTTAATTTGGTTTGCCATCACTGTGGTCTATTATTGAGAGAGCATGCTGAATATGAGCGCCATGTCATTGGCCACTTCCTAATCACCAACTCtgagtacaattgttccggaaATTGTCAAAAATCATTTGGAAAGCCCGAAGAActacaaaaacatttaatagaTCAGCATGCCATAACAATGTACAAATGTGGTCTCTGCAGTGACATGTTTGACTCGAAAGTTGCCATACAGGTACACTTTGCTTGTGCTCACTCGgcggaaacaaaaattttcagatgTTCGGCTTGCATGGATGTTTTTCGTTCGGAAACGGATTTCAATGTACATGTTAAGTCGCGTCATCAGGCCGTCAATAACAATCCGCCCCCGGTTAATTCTTTACAATGTATGTTTTGTCGCACGGTATGTTCCTCTGACCTGGAAATGCAATTCCATTTGGCAGCACATGCTAGGCAATTTCGTTGCCCTTCTTGTCCGGAAACATTTCACGTTGAATTCTTACTTGATCGTCATATGCAAACTCATCATGGCGGCTTGGAACGCTCAACTCATCCTCCACCACCACCGCCTCCGCCACCACAACCTGTAGCTCAGAAGGAAGCCTTTGAGGATCACTCTTCTCCAGTACCCAATCCAAATGCTATTTCGCCCATGAACTCATTGTATGTGAATGCTTTGTTTGGCAAAACGCCGCTAATGCCTTTGGCgccacaaaataacaacaacagcattttgGATTACAACATGGCATTTGCTTCTCATCTCAATAAGGGACTATTTCCGAATGCCGGACCCAATAAATTCTACAATCCATTGCAAATCGATACCAACGCCATGAAACATTCTGCCCTGATGTATGGCTTATCACAGAGGTATTTCGATACCAATCGCACGGTTATGGAAATGTATCAACAGCAACAGgcccaacagcaacaacaacagcaaacacatATTCCAGAGGGAAATAAAGTCCCTAGCAATTATTTCATAAGTCCCAAACAGCCCACATCAGGAGTGCATGACGCGCATCATCGTTCCGATTTGCCAACGTCATCGCCACTTAACAATACCGGCTTCAGTTGTGGTATTTGTGAACGCAATGATTTTCGCACAGAATCCGAAGTTCATTCGCACCGCAAAATTGTGCACAACCTTAAGACAGGGGTCAGTCTAAAGTGCGCCTACTGCTCGGGCAATTTCAAGTCACGAAGTGAATTAGAACATCATATGAAAACCTGTCATAATTCCACTGGCAAACACAAGTGTTTGATATGTGATGAAATCTTTCCCTCGCCCGCTATATTGGCCGAACACAAACTTCAACATTCGAAAGTGGGTCAATCGGGCAGATGTTCACACTGCTCGAAACCATTAGCTGATGTGGCCGCATTTAAATCTCATTTAACGGAACACAATACGGAGGGACAAATGCCTGTCCAATGCATATGCTGTCGCCAGTCATTGCATTCGGAATTCGAGATCGGTTTACATGCAAAGTTTcatgttaaaaattcaaatgtaacGGAAAATGTGTGTGCCCTTTGCCTGGAGCCCATTACAGCTTCACCCACTGAAGCCAAAGTTTGTGAGAAATGTTGTCGCAAACATAACCTCAACGCGAAATTCAAACAACGCGAGCATTTTGAACGTTCTGCCGATTTACGTACCCATATTGAGAATCGCTGTAACCTATGCAAAATGGTACTGCCGCATGCCCAAAAACTTCAAGAGCATTTGGTGGAGCATACATTTGCCGGCTGCGAAGATCGTGGCTTTAACTGTTACATCTGCTCGGCAGTGTTCACTGCACCCAGTGGTCTCTTAAATCATATGCTTGAACATGGTGTCAATTCAAAGCCATACGATTGCAATTTATGCCCTGAGAAATTCTACTTTCGAGCCGAGTTGGATCATCATCTAGTCGATCACGATTTAAGAGAAACTTCTGCGGCAGCGGTGAAAAATGAACAGGACCAGATGACCAAAAAAGATGACAACAATTTGAATAACATAAAGTCAGAGAAACCTGTCACACTAAACGCGGTAAAAAAGGAAGTTCTGGATACCGTGGATCACAATTCAAATAATGCCGATGAAGATGAGTACATTGAGGTGGAAAATCTCAAtgagaataacaataacaacaacaacaacaactgcggTAGAACACAAATTATGGATGCATTATCAGACAAAACAGCAGACGGCATTGAAGAACAATCAGCAGTAGAAGAGCATACAAGAAATGAAGCCACATAA
Protein Sequence: MYSTHTSSSYSPSISDGTITPNSLHHHTQHNQQQQHHHQHQHHHQHHQHLASVPPHLPFPNMSAYEEETTTTSSSMNLQTQRLARQKTNGSVMDGADYEDNNNGNDNEKASSSDINNDRKDLNSERIHKNDTKLNDDGEETDVATKKTADTIMRESGEQHQQQQQQQHHLKRHGRHHRYAEHALRIPSKLRKIDRDSTVGNGASTVGVPSTAGSAGGGSGGAVKFDKLTGDGIKSGGNNAASADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPQALNYSPRSTGSASSNGSLQKRRYGLAAAAEQSPSRIDYPKRGRSASSNMLKCTFCSKSDFTAVEQLNNHLHTQHEKELAHSMTPPAANSHPPLDNHSFQLSCEYCTMKFHNIATMFQHMRSSHLDRLTSPNSYFEHFNRLAASGTFSPRLLTAHPLRSSASTEENSIKEEHNLSSPKSVEASSRHNDDEPTDLSQNNRRSITPTNSPQNSPQEMLSTTEKPGLFFCNQCNAGLPDFESFRNHLKTHIAQGLNLVCHHCGLLLREHAEYERHVIGHFLITNSEYNCSGNCQKSFGKPEELQKHLIDQHAITMYKCGLCSDMFDSKVAIQVHFACAHSAETKIFRCSACMDVFRSETDFNVHVKSRHQAVNNNPPPVNSLQCMFCRTVCSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHGGLERSTHPPPPPPPPPQPVAQKEAFEDHSSPVPNPNAISPMNSLYVNALFGKTPLMPLAPQNNNNSILDYNMAFASHLNKGLFPNAGPNKFYNPLQIDTNAMKHSALMYGLSQRYFDTNRTVMEMYQQQQAQQQQQQQTHIPEGNKVPSNYFISPKQPTSGVHDAHHRSDLPTSSPLNNTGFSCGICERNDFRTESEVHSHRKIVHNLKTGVSLKCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGRCSHCSKPLADVAAFKSHLTEHNTEGQMPVQCICCRQSLHSEFEIGLHAKFHVKNSNVTENVCALCLEPITASPTEAKVCEKCCRKHNLNAKFKQREHFERSADLRTHIENRCNLCKMVLPHAQKLQEHLVEHTFAGCEDRGFNCYICSAVFTAPSGLLNHMLEHGVNSKPYDCNLCPEKFYFRAELDHHLVDHDLRETSAAAVKNEQDQMTKKDDNNLNNIKSEKPVTLNAVKKEVLDTVDHNSNNADEDEYIEVENLNENNNNNNNNNCGRTQIMDALSDKTADGIEEQSAVEEHTRNEAT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01237143;
90% Identity: iTF_01314164; iTF_01315843; iTF_01313269;
80% Identity: -