Basic Information

Insect: Sarcophaga carnaria
Gene Symbol: L
Assembly: GCA_958299815.1
Location: OY283153.1:80463392-80478732[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 9.4e-06 0.00099 20.5 2.0 1 23 239 261 239 261 0.98

2 17 0.68 71 5.2 5.8 1 23 267 289 267 289 0.98

3 17 3.5e-07 3.7e-05 25.0 3.1 1 23 295 317 295 317 0.99

4 17 1.6e-05 0.0017 19.7 0.3 1 23 323 345 323 345 0.98

5 17 0.02 2.1 10.0 1.8 2 23 460 482 459 482 0.96

6 17 0.043 4.5 9.0 0.7 1 23 583 605 583 605 0.97

7 17 0.77 81 5.0 1.3 2 23 613 634 612 634 0.93

8 17 0.00074 0.078 14.5 0.4 1 23 642 666 642 666 0.93

9 17 3.6 3.8e+02 2.9 0.7 1 23 701 724 701 724 0.91

10 17 0.0021 0.22 13.1 2.9 1 23 763 785 763 786 0.96

11 17 4.6 4.8e+02 2.6 0.9 1 23 969 993 969 993 0.89

12 17 0.0012 0.13 13.8 4.8 2 23 1002 1024 1001 1024 0.97

13 17 0.18 19 7.0 0.1 1 23 1030 1052 1030 1052 0.92

14 17 0.18 19 7.0 0.5 2 23 1060 1081 1060 1081 0.96

15 17 0.4 43 5.9 0.5 2 23 1171 1192 1171 1192 0.94

16 17 0.0093 0.98 11.0 0.0 1 23 1202 1224 1202 1224 0.97

17 17 0.14 15 7.3 0.7 1 23 1231 1253 1231 1253 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	9.4e-06	0.00099	20.5	2.0	1	23	239	261	239	261	0.98
2	17	0.68	71	5.2	5.8	1	23	267	289	267	289	0.98
3	17	3.5e-07	3.7e-05	25.0	3.1	1	23	295	317	295	317	0.99
4	17	1.6e-05	0.0017	19.7	0.3	1	23	323	345	323	345	0.98
5	17	0.02	2.1	10.0	1.8	2	23	460	482	459	482	0.96
6	17	0.043	4.5	9.0	0.7	1	23	583	605	583	605	0.97
7	17	0.77	81	5.0	1.3	2	23	613	634	612	634	0.93
8	17	0.00074	0.078	14.5	0.4	1	23	642	666	642	666	0.93
9	17	3.6	3.8e+02	2.9	0.7	1	23	701	724	701	724	0.91
10	17	0.0021	0.22	13.1	2.9	1	23	763	785	763	786	0.96
11	17	4.6	4.8e+02	2.6	0.9	1	23	969	993	969	993	0.89
12	17	0.0012	0.13	13.8	4.8	2	23	1002	1024	1001	1024	0.97
13	17	0.18	19	7.0	0.1	1	23	1030	1052	1030	1052	0.92
14	17	0.18	19	7.0	0.5	2	23	1060	1081	1060	1081	0.96
15	17	0.4	43	5.9	0.5	2	23	1171	1192	1171	1192	0.94
16	17	0.0093	0.98	11.0	0.0	1	23	1202	1224	1202	1224	0.97
17	17	0.14	15	7.3	0.7	1	23	1231	1253	1231	1253	0.93

Sequence Information

Coding Sequence: ATGTATTCGACCCATACATCTTCCAGTTATTCACCTTCCATATCAGATGGTACCATCACACCAAATTCTTTACATCATCATCCCCAAcacaatcaacaacaacaacatcatcagcatcaacatcatACGCATCACCAGCATTTGGCTGTGCCACCGCATTTACCATTTCCCAATACGTCTGCTTATGAAGAAGAGACAACAACATCGTCATCGATGAATCTACAGACACAACGTCTGGCAAGACAAAAAACTAATGGGTCGCTCTTGGATGGCGCTGACTATGAAGACAACAATAACGGCAACGACAATGAGAAAGGCAGCAGTGACATCAACAACGACCGCAAAGACCTCAAAAGCGAAAGGATTCACAAAAATGATACAAAGTTAAATGATGAAGGCGAAGAAACGGATGTTGCAGACAAAAAGACAGACGCAATTATGCGCGAAAGTGGCGAgcaacatcaacatcagcaacaacaacatcatcttAAACGTCATGGTCGTCATCATCGTTATGCTGAACATGCCTTAAGAATTCCTTCCAAATTACGTAAAATCGATAGGGATTCAACGGTTGGCAATGGTGCCAGCACCGTCGGTGTTCCTTCGACGgctggtagtggtggtggtggtggtggtgcagTCAAGTTTGATAAGTTGACAGGAGATGGCATTAAAAGTGGTGGCAATAATGCTGCCAGTGCCGACGGTTCCTATAAATGTCAATTCTGTGATAAATCATTTCCGCGTCTTGGTTATTTGAAAAAACATGAACAGaGTCATGCTGAGCATTTGCCTTTTAAATGTGATTATTGTGCTCGTCTTTTTAAGCACAAACGCTCTAGGGATCGTCATACCAAACTGCATACAGGCGATCGACGTTATCGTTGTCCTCATTGCGAGGCAGCCTTCTCAAGGAGCGATCATTTAAAAATCCATATGAAAACCCATGATAATCAGAAACCATTTCAATGTACCATATGTAATCGTGGCTATAATACCGCTGCTGCTCTTACTTCGCACATGCAAAATCATAAGAAACAAGCTGCTCTTTTGGCAGCTGGTGGCAATCCTCAAGCTCTTAATTACAGCCCACGATCCACGGGATCTGCCTCCAGCAATGGCAGTCTACAGAAGAGACGTTACGGTTTGGCAGCGGCTGCCGAACAAAGTCCCAGTAGGATTGATTATCCTAAACGTGGACGATCAGCATCATCGAATATGCTAAAGTGCACATTCTGTTCAAAATCTGATTTTACCGCCGTAGAGCAGTTAAACAATCACTTGCATACACAGCATGAAAAAGAATTGGCTCATTCCATGACACCGCCCGCGGCAAATAGCCATCCGCCGCTAGACAACCATAGTTTCCAGTTATCGTGTGAATACTGTACCATGAAGTTCCACAATATTGCCACCATGTTTCAACACATGCGTTCAGCTCATTTAGATCGTTTGACCAGCCCAAATTCGTACTTTGAACATTTTAATCGCTTAGCTGCCTCTGGTACTTTCAGTCCACGTTTATTAACAGCACATCCACTCCGGAGTTCGGCCAGTACCGAAGAGAATTCCATCAAAGAAGAACACAATTTATCAAGTCCTAAATCTGTAGAAGCCAGTTCTCGTCATAACGATGATGAGCCCACAGATCTGAGCCAGAACAATCGTAGATCCATAACTCCCACCAATTCGCCGCAGAATTCTCCTCAAGAAATTCTGAATACCACCGAAAAGCCAGGCTTGTTCTTTTGCAATCAATGCAATGCTGGTCTACCAGACTTTGAATCATTTCGCAATCATTTAAAGACACATATAGCTCAAGGCCTTAACCTGGTTTGTCATCATTGTGGCCTATTATTGAGAGAGCATGCTGAATATGAGAGACATGTTATTGGCCACTTCCTAATCACCAACTCcgagtacaattgttccggaaATTGTCAAAAGTCATTTGGAAAGCCAGAAGAACTACAAAAACATCTGTTAGATCAGCATGCCATAACAATGTTCAAATGTGGTCTCTGCAGCGACATGTTTGAATCGAAAGTAGCCATACAGGTACACTTTGCTTGTACTCATTCAGCGGAATCTAAAATTTTTAGATGCTCGGCTTGTATGGATGTTTTTCGTTCGGAAACGGATTTCAATGTACATGTTAAGTCTCGTCATCAAGCCGTCAATAACAATCCTCCCCCGGTTAATTCTTTGCAATGTATGTTTTGTCGCACGGTATGTTCCTCTGACTTGGAAATGCAATTCCATTTGGCAGCACACGCTAGGCAATTTCGTTGCCCTTCTTGTCCGGAAACTTTTCACGTTGAATTTTTACTTGACCGTCACATGCAAACACATCATGGCGGCTTGGAGCGCTCAGCTCATCCtccaccgccaccaccaccacaaccTGTAGCTCCGAAGGAAGCTTTTGAGGATCACGCTTCTCCAGTACCCAATCCAAATGCTATTTCACCCATGAACTCATTGTATGTAAATGCACTGTTTGGCAAACCGCCGCTAATGCCTTTGGCgccacaaaataacaacaacagcattttgGATTACAATATGGCATTTGCTTCTCATCTTAATAAGGGACTATTTCCCAATGCCGGCCCCAATAAATTCTATAATCCACTGCAAATCGATACAAATGCCATGAAACACTCGGCCCTGATGTATGGCTTATCACAGAGATATTTCGATACCAATCGCACGGTTATGGAAATGTATCAACAGCAACAggcccaacaacaacaacagcatcaacagCAAACACACATTCAAGAGGGAAGTAAAGTCCCTGGCAATTACTTCATAAGTCCCAAACAGCCCACATCAGGAGTACATGACACCCATCATCGTTCCGATTTGCCAACGTCGTCACCACTCAACAACACCGGTTTCAGCTGTGGAATTTGCGAACGCAACGATTTTCGTACAGAATCCGAAGTTCACTCTCACCGCAAGATTGTGCACAACCTTAAGACAGGGGTTAGTCTAAAGTGCGCTTATTGCTCGGGCAACTTCAAGTCACGTAGCGAACTAGAACACCATATGAAAACCTGTCATAATTCCACTGGCAAACACAAGTGTTTAATATGTGATGAAATCTTTCCCTCGCCTGCTATATTGGCCGAGCACAAACTACAACATTCTAAAGTGGGTCAGTCGGGAAGATGTTCTCACTGCTCGAAACCATTAGCTGATGTTGCCGCATTCAAATCTCATTTATCCGAACATAATAAAGAGGGTCAAATGCCTGTGCAATGCATATGTTGTCGCCAGTCATTGCATTCGGAATTCGAGATCGGTTTGCATGCAAAATTTCatgttaaaaattcaaatgtaacGGAAAATGTATGTGCCCTTTGCCTGGAGCCTATAACAGCTTCACCCACTGAAGCCAAAGTCTGTGAGAAATGTTGTCGCAAACATAACCTCAACACGAAATTCAAGCAGCGAGAGCATTTTGAACGTTCTGCCGATTTACGTCCCCACATTGAGAATCGATGTAACCTATGCAAAATGGTACTGCCGCATGCACAAAAACTTCAAGAGCATTTGGTGGAACACACATTTGCCGGCTGTGAGGATCGTGGCTTTAACTGTTACATCTGCTCGGCGGTTTTCACTGCACCCGGTGGTCTCTTAAATCACATGCTTGAACATGGTGTGAACTCAAAGCCATACGATTGCAATTTATGCCCTGAGAAATACTACTTCCGAGCCGAGTTGGATCATCATCTAGTCGATCACGATTTAAGAGAATCTTCTTCGGCAGCCGTGAAAAATGAACAGGATTATATGACCAAAAAAGATGACAACAATTCGGACAGCATAAAGTCAGAGAAAACTGTGCCATTAAGCGAGGTAAAAAAGGAAGTTGTGGACACTGATCACAATTCAAATAATGCCGATGAAGATGAATACATCGAGGTGGAGAATCTCAAtgagaataacaataacaataacagcggCAGAACGCAAATTATGGATGCATTGTCAGACAAAACAGACTGCATTGAAGAGCAATCAGCAGAAGAGCATACAAGAAATGAAGTCACATAA
Protein Sequence: MYSTHTSSSYSPSISDGTITPNSLHHHPQHNQQQQHHQHQHHTHHQHLAVPPHLPFPNTSAYEEETTTSSSMNLQTQRLARQKTNGSLLDGADYEDNNNGNDNEKGSSDINNDRKDLKSERIHKNDTKLNDEGEETDVADKKTDAIMRESGEQHQHQQQQHHLKRHGRHHRYAEHALRIPSKLRKIDRDSTVGNGASTVGVPSTAGSGGGGGGAVKFDKLTGDGIKSGGNNAASADGSYKCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPQALNYSPRSTGSASSNGSLQKRRYGLAAAAEQSPSRIDYPKRGRSASSNMLKCTFCSKSDFTAVEQLNNHLHTQHEKELAHSMTPPAANSHPPLDNHSFQLSCEYCTMKFHNIATMFQHMRSAHLDRLTSPNSYFEHFNRLAASGTFSPRLLTAHPLRSSASTEENSIKEEHNLSSPKSVEASSRHNDDEPTDLSQNNRRSITPTNSPQNSPQEILNTTEKPGLFFCNQCNAGLPDFESFRNHLKTHIAQGLNLVCHHCGLLLREHAEYERHVIGHFLITNSEYNCSGNCQKSFGKPEELQKHLLDQHAITMFKCGLCSDMFESKVAIQVHFACTHSAESKIFRCSACMDVFRSETDFNVHVKSRHQAVNNNPPPVNSLQCMFCRTVCSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHGGLERSAHPPPPPPPQPVAPKEAFEDHASPVPNPNAISPMNSLYVNALFGKPPLMPLAPQNNNNSILDYNMAFASHLNKGLFPNAGPNKFYNPLQIDTNAMKHSALMYGLSQRYFDTNRTVMEMYQQQQAQQQQQHQQQTHIQEGSKVPGNYFISPKQPTSGVHDTHHRSDLPTSSPLNNTGFSCGICERNDFRTESEVHSHRKIVHNLKTGVSLKCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGRCSHCSKPLADVAAFKSHLSEHNKEGQMPVQCICCRQSLHSEFEIGLHAKFHVKNSNVTENVCALCLEPITASPTEAKVCEKCCRKHNLNTKFKQREHFERSADLRPHIENRCNLCKMVLPHAQKLQEHLVEHTFAGCEDRGFNCYICSAVFTAPGGLLNHMLEHGVNSKPYDCNLCPEKYYFRAELDHHLVDHDLRESSSAAVKNEQDYMTKKDDNNSDSIKSEKTVPLSEVKKEVVDTDHNSNNADEDEYIEVENLNENNNNNNSGRTQIMDALSDKTDCIEEQSAEEHTRNEVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01237143;
90% Identity: iTF_01314983;
80% Identity: -