Basic Information

Insect: Sarcophaga subvicina
Gene Symbol: L
Assembly: GCA_936440885.2
Location: CAKZFJ020000109.1:125081-141379[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.6e-06 0.00078 20.7 1.7 1 23 240 262 240 262 0.98

2 17 0.63 65 5.2 5.8 1 23 268 290 268 290 0.98

3 17 3.3e-07 3.4e-05 24.9 3.1 1 23 296 318 296 318 0.99

4 17 1.5e-05 0.0016 19.7 0.3 1 23 324 346 324 346 0.98

5 17 0.019 2 10.0 1.8 2 23 461 483 460 483 0.96

6 17 0.04 4.1 9.0 0.7 1 23 584 606 584 606 0.97

7 17 0.71 74 5.0 1.3 2 23 614 635 613 635 0.93

8 17 0.00049 0.051 15.0 1.1 1 23 643 666 643 667 0.94

9 17 3.4 3.5e+02 2.9 0.7 1 23 702 725 702 725 0.91

10 17 0.002 0.2 13.1 2.9 1 23 764 786 764 787 0.96

11 17 4.3 4.4e+02 2.6 0.9 1 23 970 994 970 994 0.89

12 17 0.0011 0.12 13.8 4.8 2 23 1003 1025 1002 1025 0.97

13 17 0.17 17 7.0 0.1 1 23 1031 1053 1031 1053 0.92

14 17 0.17 18 7.0 0.5 2 23 1061 1082 1061 1082 0.96

15 17 0.38 39 5.9 0.5 2 23 1172 1193 1172 1193 0.94

16 17 0.0086 0.89 11.0 0.0 1 23 1203 1225 1203 1225 0.97

17 17 0.13 13 7.3 0.7 1 23 1232 1254 1232 1254 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.6e-06	0.00078	20.7	1.7	1	23	240	262	240	262	0.98
2	17	0.63	65	5.2	5.8	1	23	268	290	268	290	0.98
3	17	3.3e-07	3.4e-05	24.9	3.1	1	23	296	318	296	318	0.99
4	17	1.5e-05	0.0016	19.7	0.3	1	23	324	346	324	346	0.98
5	17	0.019	2	10.0	1.8	2	23	461	483	460	483	0.96
6	17	0.04	4.1	9.0	0.7	1	23	584	606	584	606	0.97
7	17	0.71	74	5.0	1.3	2	23	614	635	613	635	0.93
8	17	0.00049	0.051	15.0	1.1	1	23	643	666	643	667	0.94
9	17	3.4	3.5e+02	2.9	0.7	1	23	702	725	702	725	0.91
10	17	0.002	0.2	13.1	2.9	1	23	764	786	764	787	0.96
11	17	4.3	4.4e+02	2.6	0.9	1	23	970	994	970	994	0.89
12	17	0.0011	0.12	13.8	4.8	2	23	1003	1025	1002	1025	0.97
13	17	0.17	17	7.0	0.1	1	23	1031	1053	1031	1053	0.92
14	17	0.17	18	7.0	0.5	2	23	1061	1082	1061	1082	0.96
15	17	0.38	39	5.9	0.5	2	23	1172	1193	1172	1193	0.94
16	17	0.0086	0.89	11.0	0.0	1	23	1203	1225	1203	1225	0.97
17	17	0.13	13	7.3	0.7	1	23	1232	1254	1232	1254	0.93

Sequence Information

Coding Sequence: ATGTATTCGACCCATACATCTTCCAGTTATTCACCTTCCATATCAGATGGTACCATCACACCAAATTCTTTACATCATCATCCCCAAcacaatcaacaacaacaacatcatcatcatcaacatcatacgCATCACCAGCATTTGACTGTGCCACCGCATTTACCATTTCCCAATACGTCTGCTTATGAAGAAGAGACAACAACATCGTCATCGATGAATCTACAGACACAACGTCTGGCAAGACAAAAAACTAATGGGTCGCTCTTGGATGGCGCTGACTATGAAGACAACAATAACGGCAACGACAATGAGAAAGGCAGCAGTGACATCAACAACGACTGCAAAGACCTCAACAGCGAAAGGATTCacaaaaatgatacaaaattaaatgatgAAGGCGAAGAAACGGATGTTGCAGACAAAAAGACAGACGCAATTATGCGCGAAAGTGGCGAgcaacatcaacatcagcaacagcagcaacaacaacatcatcttaAACGTCATGGTCGTCATCATCGTTATGCTGAACATGCCTTAAGAATTCCTTCCAAATTACGCAAAATCGATAGGGATTCAACGGTTGGCAATGGTGCCAGCACCGTCGGTGTTCCTTCGACGgctggtagtggtggtggtggtgcagTCAAGTTTGATAAGTTGACAGGAGATGGCATTAAAAGTGGTGGCAACAATGCTGCCAGTGCCGACGGTTCCTATCAATGTCAATTCTGTGATAAATCATTTCCGCGTCTTGGTTATTTGAAAAAACATGAACAGaGTCATGCTGAGCATTTGCCTTTTAAATGTGATTATTGTGCTCGTCTTTTTAAGCACAAACGCTCTAGGGATCGTCATACCAAACTGCATACAGGCGATCGACGTTATCGTTGTCCTCATTGCGAGGCAGCCTTCTCAAGGAGCGATCATTTGAAAATCCATATGAAAACCCATGACAATCAGAAACCATTTCAATGTACCATATGTAATCGTGGCTATAATACCGCTGCTGCTCTCACATCGCACATGCAAAATCATAAGAAACAGGCTGCTCTTTTGGCAGCTGGTGGCAATCCTCAAGCTCTTAATTACAGCCCACGATCCACGGGATCTGCCTCCAGCAATGGCAGTCTTCAGAAGAGACGGTACGGTTTGGCAGCGGCTGCCGAACAAAGTCCCAGTAGGATTGATTATCCTAAACGTGGACGATCAGCATCATCGAATATGCTAAAGTGCACATTCTGTTCAAAATCTGATTTTACCGCCGTAGAGCAGTTAAACAATCATTTGCATACACAGCATGAAAAAGAATTGGCTCATTCCATGACACCGCCCGCTGCAAATAGCCATCCGCCGCTAGACAACCACAGTTTCCAGTTATCGTGTGAATACTGCACCATGAAATTCCACAATATTGCCACCATGTTTCAACACATGCGTTCAGCTCATTTAGATCGTTTGACCAGTCCAAATTCgtattttgaacattttaatcGCTTAGCTGCCTCTGGTACTTTCAGTCCACGTTTGTTAACAGCTCATCCCCTTAGGAGTTCAGCCAGTACCGAAGAGAATTCCATCAAAGAAGAACACAATTTATCAAGTCCTAAATCTGTAGAAGCCAGTTCTCGTCATAACGATGATGAGCCCACAGATCTGAGTCAGAATAATCGCAGATCCATAACTCCCACCAATTCGCCGCAGAATTCTCCTCAAGAAATTCTGAATACCACCGAAAAGCCAGGCTTGTTCTTTTGCAATCAATGCAATGCTGGTCTACCAGACTTTGAATCATTTCGCAATCATTTAAAGACACATATAGCCCAAGGCCTTAACCTGGTTTGTCATCATTGCGGCTTATTATTGAGAGAGCATGCTGAATATGAGAGACATGTTATTGGCCACTTCCTAATCACCAACTCcgagtacaattgttccggaaATTGTCAAAAGTCATTTGGAAAGCCAGAAGAACTACAAAAACATCTGTTAGATCATCATGCCATAACAATGTTCAAATGTGGTCTGTGCAGCGACATGTTTGAATCGAAAGTAGCCATACAGGTACACTTTGCTTGTACTCATTCGGcagaaactaaaatttttagatGCTCGGCTTGCATGGATGTTTTTCGTTCGGAAACGGATTTCAATGTACATGTTAAGTCTCGTCATCAAGCCATCAATAACAATCCTCCCCCGGTTAATTCTTTGCAATGTATGTTTTGTCGCACGGTATGTTCCTCTGACCTGGAAATGCAATTCCATTTGGCAGCACACGCTAGGCAATTTCGTTGCCCTTCTTGTCCGGAAACTTTTCACGTTGAATTTTTACTTGATCGTCACATGCAAACTCATCATGGCGGCTTGGAGCGCTCAACACATCctccaccgccaccaccaccacaacctGTAGCTCAGAAGGAAGCTTTTGAGGGTCACTCTTCTCCAGTACCCAATCCAAATACTATTTCACCCATGAACTCATTGTATGTAAATGCTCTGTTTGGCAAAACGCCGCTAATGCCTTTGGCgccacaaaataacaacaacagcattttgGATTACAACATGGCATTTGCTTCTCATCTCAATAAGGGACTATTTCCCAATGCCGGCCCCAATAAATTCTACAATCCATTGCAAATCGATACAAATGCCATGAAACACTCTGCCCTGATGTATGGCTTATCACAGAGATATTTCGATACCAATCGCACGGTTATGGAAATGTATCAACAGCAACAagcccaacaacaacaacagcatcaacagCAAACACACATTCAAGAGGGAAGCAAAGTCCCTGGCAATTACTTCATAAGTCCCAAACAGCCCACATCAGGAGTACATGACACCCATCATCGTTCCGATTTGCCAACGTCGTCGCCACTCAACAACACTGGTTTCAGTTGTGGAATTTGCGAACGCAACGATTTTCGTACAGAATCCGAAGTTCACTCTCACCGCAAGATTGTGCACAACCTTAAGACAGGGGTTAGTCTGAAGTGCGCCTATTGCTCGGGCAACTTCAAGTCACGTAGCGAATTAGAACACCATATGAAAACCTGTCATAATTCCACTGGCAAACACAAGTGTCTGATATGTGATGAAATCTTTCCCTCGCCCGCTATATTGGCCGAACACAAACTACAACATTCCAAAGTGGGTCAATCCGGAAGATGTTCTCACTGCTCGAAACCATTAGCTGATGTTGCCGCATTTAAATCTCATTTATCGGAACACAATACAGAGGGACAAATGCCTGTGCAATGCATATGTTGTCGGCAGTCATTGCATTCGGAATTCGAGATCGGTTTGCATGCAAAatttcatgttaaaaattcaaatgtaacGGAAAATGTGTGTGCCCTTTGCCTGGAGCCCATTACAGCTTCACCCACTGAAGCCAAAGTTTGTGAGAAATGTTGTCGCAAACATAACCTCAACACGAAATTCAAGCAGCGAGAGCATTTTGAACGGTCTGCCGATTTACGTCCCCACATTGAGAATCGCTGTAACCTGTGCAAAATGGTACTGCCGCATGCACAAAAACTTCAAGAGCATTTGGTGGAACACACATTTGCCGGCTGCGAGGATCGTGGCTTTAACTGTTACATCTGCTCAGCGGTTTTCACTGCACCCGGTGGTCTCTTAAATCACATGCTTGAACATGGTGTCAATTCAAAGCCATACGATTGCAATTTATGCCCTGAGAAATACTACTTCCGAGCCGAGTTGGATCATCATCTAGTCGATCACGATTTAAGAGAATCTTCTTCGGCAGCCGTGAAAAATGAACAGGATCATGTGACCAAAAAAGGTGACAACAATTCGGACAGCATAAAGTCAGAGAAACCTGTGCCATTAAGCGAGGTAAAAAAAGAAGTTGTGGATACTGATCACAATTCAAATAATGCCGATGAAGATGAGTACATAGAGGTGGAGAATCTCaatgagaacaacaataataacaacagcggCAGAACGCAAATTATGGATGCATTGTCAGACAAAACAGACGTCATTGAAGAGCAATCAGCAGAAGAGCATACAAGAAATGAAGGCACATAA
Protein Sequence: MYSTHTSSSYSPSISDGTITPNSLHHHPQHNQQQQHHHHQHHTHHQHLTVPPHLPFPNTSAYEEETTTSSSMNLQTQRLARQKTNGSLLDGADYEDNNNGNDNEKGSSDINNDCKDLNSERIHKNDTKLNDEGEETDVADKKTDAIMRESGEQHQHQQQQQQQHHLKRHGRHHRYAEHALRIPSKLRKIDRDSTVGNGASTVGVPSTAGSGGGGAVKFDKLTGDGIKSGGNNAASADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPQALNYSPRSTGSASSNGSLQKRRYGLAAAAEQSPSRIDYPKRGRSASSNMLKCTFCSKSDFTAVEQLNNHLHTQHEKELAHSMTPPAANSHPPLDNHSFQLSCEYCTMKFHNIATMFQHMRSAHLDRLTSPNSYFEHFNRLAASGTFSPRLLTAHPLRSSASTEENSIKEEHNLSSPKSVEASSRHNDDEPTDLSQNNRRSITPTNSPQNSPQEILNTTEKPGLFFCNQCNAGLPDFESFRNHLKTHIAQGLNLVCHHCGLLLREHAEYERHVIGHFLITNSEYNCSGNCQKSFGKPEELQKHLLDHHAITMFKCGLCSDMFESKVAIQVHFACTHSAETKIFRCSACMDVFRSETDFNVHVKSRHQAINNNPPPVNSLQCMFCRTVCSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHGGLERSTHPPPPPPPQPVAQKEAFEGHSSPVPNPNTISPMNSLYVNALFGKTPLMPLAPQNNNNSILDYNMAFASHLNKGLFPNAGPNKFYNPLQIDTNAMKHSALMYGLSQRYFDTNRTVMEMYQQQQAQQQQQHQQQTHIQEGSKVPGNYFISPKQPTSGVHDTHHRSDLPTSSPLNNTGFSCGICERNDFRTESEVHSHRKIVHNLKTGVSLKCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGRCSHCSKPLADVAAFKSHLSEHNTEGQMPVQCICCRQSLHSEFEIGLHAKFHVKNSNVTENVCALCLEPITASPTEAKVCEKCCRKHNLNTKFKQREHFERSADLRPHIENRCNLCKMVLPHAQKLQEHLVEHTFAGCEDRGFNCYICSAVFTAPGGLLNHMLEHGVNSKPYDCNLCPEKYYFRAELDHHLVDHDLRESSSAAVKNEQDHVTKKGDNNSDSIKSEKPVPLSEVKKEVVDTDHNSNNADEDEYIEVENLNENNNNNNSGRTQIMDALSDKTDVIEEQSAEEHTRNEGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01237143;
90% Identity: iTF_01314983;
80% Identity: -