Spla006510.1
Basic Information
- Insect
- Salpingus planirostris
- Gene Symbol
- tfip11
- Assembly
- GCA_949788335.1
- Location
- OX460921.1:42691-56684[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-88 1.4e-84 284.0 8.4 2 275 258 523 257 523 0.97 2 2 0.26 9.2e+02 -0.8 0.0 242 269 535 562 527 572 0.58
Sequence Information
- Coding Sequence
- ATGACGAAAGTGGTATCTTCTGAGAATTTGATGAACAGAGGCGTGGGACAGTGGGAGAAGCACACCAAAGGGATCGGGGCGAAACTGCTTCTCCAAATGGGCTTCCAGCCGGGCAGAGGTCTCGGCAAAGACCTTCAGGGCATTTCGGCACCCGTCGAGGCGCACCTGAGAAAAGGCAGAGGCGCCATCGGCGCTTATGGGCCAGAGAAGGCCGCGAGCATCAGCAAAACGCCCGGAATCGCTCTGGACGCTGTTACACACAAAGAGGGCGAGTCCAAGTGGAAGAAAAACGACAGCTCGAAGAAGAAGACTCGTTACTATTACAGGAGTGTGGATGACGTCATTGAGAAAGGGAAACGTCCAGGAGGATTATTTCGAGGTGCAGCTGGACCGACAAGTGAGTTGAGTAAAGTGAAGGTGATCGACATGACGGGTCCCCAGCAACGCGTTTTGAGCGGTTACCATGCTCTGAGCGGTCTGAAAGCGCCACCCGGTGTCGAACACTACGAGGACGTCGTGCACAAGAAGTGCTCCAATTTCGCCCTGCCCGAAATCCAGCACAACCTCGATCTGCTGGTCGACATGTGCGAACAGGACATCATCAGAATAGACCGAGACACCAGGTTCAATCAGGACCGGATCGTGGCCCTCGAACAGGAAGCCGATTCGCTGGGCGTCCAGGTGAAAACCGAGGATAAGCTCATAGGCGACCTCAAAACGGTCATGGAGATCGTGGAGCAACTGTTGGATCCGTCGCTGGGCCTGTCACTGCTACAGGTCGCCCGGATCTTCAACAATTTACAGGAGTGTCATTACGACGAATACGTGCGATACGAATTGGGCGAGCTGGCTCCCGGTCTGGTCGGGCCTCTGTTGACGTCCGCTTTGGCCAATCCGGGCCAGTATGTCGACGTTTTCGGCCAATGGAAGGAGATCTTGATGGATGGGCCGAGGCGACGTGAGATTCTAGAAGATAATAATGTGGGAATACAGCCGTATGATAGTCTCTTATGGCACACTTGGATGCCTGTAATGAGAACGTGCGTTAGCGAGTGGAATGCGCGCGATTGCGATTCGCTGATCACCCTGATCGAGACGTGGAAACCGATTTTGCCACCGTGGATTCTGGACCACGTGTACGATCAGGTCGTGGTGCCCAGGATTCGTGCCGAAGTCGACCTGTGGAATCCCCTCACCGACACCGTGGCCATCCACCTGTGGATCCACCCCTGGATCCCGTTGCTCGACACCAGGCTGCAGGCGTCCGTCTATCCGACGATCCAAGAGAAACTGGGCTCCGCGCTGACCAATTGGCACCCGTCCGACTCGACCGCCAAACCGATGTTAAAACCGTGGCGACGGGTCCTGCCGGACGGAGTTTTCGTGGCGTTCCTGATCAAGCACATCGTGCCGAAATTGCAAATGTGCATGCAACAGCTCGTCATCAATCCACATCAGCAACATCTAGAGGCGTGGTATTGGGTGATGGACTGGAACGACATGTTATCGGTCGGTAACATGACGTTAATACTGGACAAGTTTTTCTTCCCTCGATGGCGGCAAACTTTGGCCATGTGGTTGAACCACAATCCGAACTACACCCAGGTCACAGAGTGGTACTCGGGTTGGAAGAGCATGCTCTCCGAGGAGCTGCTAGCTCAGCCCACAATCAAGGAGAACTTCCACAACGCGCTGGAAATTATGAGTCGGGCGGTGAGCATCGGCCAGCAGCCGGGCGCCAAAGAGTCCATTTCGTACCTGAGTTCGATGGAGAACAACGCACCGAGTGCGGCGCCGCCTCCGCGGGAATCGTTCGCGGAGGCGGTCAGAGCCGTTTCCAAGATACCGCCGCTTTATAAGGACTTGGTGGGCAAACGTTGTGAGGAGCGCGGAATCCTGTTTGTGCCCATTCCGAACAAGTATCACGAGGCCAAACAAGTTTACAGGATCGGAACCAACGGAGTTCAATGCTACATCGACAGGAATGTCGTGTTTTCGGCACAGAATGGCACGAACTGGACCCCAACGTCACTCAATAGATTACTAGATATCGCTTAA
- Protein Sequence
- MTKVVSSENLMNRGVGQWEKHTKGIGAKLLLQMGFQPGRGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKAASISKTPGIALDAVTHKEGESKWKKNDSSKKKTRYYYRSVDDVIEKGKRPGGLFRGAAGPTSELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHYEDVVHKKCSNFALPEIQHNLDLLVDMCEQDIIRIDRDTRFNQDRIVALEQEADSLGVQVKTEDKLIGDLKTVMEIVEQLLDPSLGLSLLQVARIFNNLQECHYDEYVRYELGELAPGLVGPLLTSALANPGQYVDVFGQWKEILMDGPRRREILEDNNVGIQPYDSLLWHTWMPVMRTCVSEWNARDCDSLITLIETWKPILPPWILDHVYDQVVVPRIRAEVDLWNPLTDTVAIHLWIHPWIPLLDTRLQASVYPTIQEKLGSALTNWHPSDSTAKPMLKPWRRVLPDGVFVAFLIKHIVPKLQMCMQQLVINPHQQHLEAWYWVMDWNDMLSVGNMTLILDKFFFPRWRQTLAMWLNHNPNYTQVTEWYSGWKSMLSEELLAQPTIKENFHNALEIMSRAVSIGQQPGAKESISYLSSMENNAPSAAPPPRESFAEAVRAVSKIPPLYKDLVGKRCEERGILFVPIPNKYHEAKQVYRIGTNGVQCYIDRNVVFSAQNGTNWTPTSLNRLLDIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01311555; iTF_01311554;
- 90% Identity
- iTF_01311555; iTF_01311554;
- 80% Identity
- -