Spla000640.1
Basic Information
- Insect
- Salpingus planirostris
- Gene Symbol
- tfip11
- Assembly
- GCA_949788335.1
- Location
- CATKUT010000024.1:7436-31164[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-88 6.4e-85 285.1 8.3 2 275 263 528 262 528 0.97 2 2 0.33 1.2e+03 -1.1 0.0 243 269 541 567 533 573 0.64
Sequence Information
- Coding Sequence
- ATGCAAAAGGCTCTACAACCAGGCCAAGTATCTTCTGAGAATTTGATGAACAGAGGCGTGGGACAGTGGGAGAAGCACACCAAAGGGATCGGGGCGAAACTGCTTCTCCAAATGGGCTTCCAGCCGGGCAGAGGTCTCGGCAAAGACCTTCAGGGCATTTCGGCACCCGTCGAGGCGCACCTGAGAAAAGGCAGAGGCGCCATCGGCGCTTATGGGCCAGAGAAGGCCGCGAGCATCAGCAAAACGCCCGGAATCGCTCTGGACGCTGTTACACACAAAGAGGGCGAGTCCAAGTGGAAGAAAAACGACAGCTCGAAGAAGAAGACTCGTTACTATTACAGGAGTGTGGATGACGTCATTGAGAAAGGGAAACGTCCAGGAGGATTATTTCGAGGTGCAGCTGGACCGACAAGTGAGTTGAGTAAAGTGAAGGTGATCGACATGACGGGTCCCCAGCAACGCGTTTTGAGCGGTTACCATGCTCTGAGCGGTCTGAAAGCGCCACCCGGTGTCGAACACTACGAGGACGTCGTGCACAAGAAGTGCTCCAATTTCGCCCTGCCCGAAATCCAGCACAACCTCGATCTGCTGGTCGACATGTGCGAACAGGACATCATCAGAATAGACCGAGACACCAGGTTCAATCAGGACCGGATCGTGGCCCTCGAACAGGAAGCCGATTCGCTGGGCGTCCAGGTGAAAACCGAGGATAAGCTCATAGGCGACCTCAAAACGGTCATGGAGATCGTGGAGCAACTGTTGGATCCGTCGCTGGGCCTGTCACTGCTACAGGTCGCCCGGATCTTCAACAATTTACAGGAGTGTCATTACGACGAATACGTGCGATACGAATTGGGCGAGCTGGCTCCCGGTCTGGTCGGGCCTCTGTTGACGTCCGCTTTGGCCAATCCGGGCCAGTATGTCGACGTTTTCGGCCAATGGAAGGAGATCTTGATGGATGGGCCGAGGCGACGTGAGATTCTAGAAGATAATAATGTGGGAATACAGCCGTATGATAGTCTCTTATGGCACACTTGGATGCCTGTAATGAGAACGTGCGTTAGCGAGTGGAATCCGCGCGATTGCGATTCGCTGATCACCCTGATCGAGACGTGGAAACCGATTTTGCCACCGTGGATTCTGGACCACGTGTACGATCAGGTCGTGGTGCCCAGGATTCGTGCCGAAGTCGACCTGTGGAATCCGCTCACCGACACCGTGGCCATCCACCTGTGGATCCACCCCTGGATCCCGTTGCTCGACACCAGGCTGCAGGCGTCCGTCTATCCGACGATCCAAGAGAAACTGGGCTCCGCGCTGACCAATTGGCACCCGTCCGACTCGACCGCCAAACCAATGTTGAAACCGTGGCGACGTGTCCTGCCGGACGGAGTTTTCGTGGCGTTCCTGATCAAGCACATCGTGCCGAAATTGCAAATGTGCATGCAACAGCTTGTCATCAATCCACATCAGCAACATCTAGAGGCGTGGTATTGGGTGATGGACTGGAACGACATGTTATCGGTCGGTAACATGACGTTAATACTGGACAAGTTTTTCTTCCCTCGATGGCGGCAAACTTTGGCCATGTGGTTGAACGACAATCCGAACTACACCCAGGTCACAGAGTGGTACTCGGGTTGGAAGAGCATGCTCCCCGAGGAGCTGCTGGCTCAGCCCACAATCAAGGAGAACTTCCACAACGCGCTGGAAATTATGAGTCGGGCGGTGAGCATCGGCCAGCAGCCGGGCGCCAAAGAGTCCATTTCGTACCTGAGTTCGATGGAGAACAACGCACCGAGTGCGGCGCCGCCTCCGCGGGAATCGTTCGCGGAGGCGGTCAGAGCCGTTTCCAAGATACCGCCGCTTTATAAGGACTTGGTGGGCAAACGTTGTGAGGAGCGCGGTATCCTGTTTGTGCCCATTCCGAACAAGTATCACGAGGCCAAACAAGTTTACAGGATCGGAACCAACGGAGTCCAATGCTACATCGACAGGAATGTCGTGTTTTCGGCACAGAATGGCACGAACTGGACCCCAACGTCACTCAATAGATTACTAGATATCGCTTAA
- Protein Sequence
- MQKALQPGQVSSENLMNRGVGQWEKHTKGIGAKLLLQMGFQPGRGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKAASISKTPGIALDAVTHKEGESKWKKNDSSKKKTRYYYRSVDDVIEKGKRPGGLFRGAAGPTSELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHYEDVVHKKCSNFALPEIQHNLDLLVDMCEQDIIRIDRDTRFNQDRIVALEQEADSLGVQVKTEDKLIGDLKTVMEIVEQLLDPSLGLSLLQVARIFNNLQECHYDEYVRYELGELAPGLVGPLLTSALANPGQYVDVFGQWKEILMDGPRRREILEDNNVGIQPYDSLLWHTWMPVMRTCVSEWNPRDCDSLITLIETWKPILPPWILDHVYDQVVVPRIRAEVDLWNPLTDTVAIHLWIHPWIPLLDTRLQASVYPTIQEKLGSALTNWHPSDSTAKPMLKPWRRVLPDGVFVAFLIKHIVPKLQMCMQQLVINPHQQHLEAWYWVMDWNDMLSVGNMTLILDKFFFPRWRQTLAMWLNDNPNYTQVTEWYSGWKSMLPEELLAQPTIKENFHNALEIMSRAVSIGQQPGAKESISYLSSMENNAPSAAPPPRESFAEAVRAVSKIPPLYKDLVGKRCEERGILFVPIPNKYHEAKQVYRIGTNGVQCYIDRNVVFSAQNGTNWTPTSLNRLLDIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01311556;
- 90% Identity
- iTF_01311556;
- 80% Identity
- -